BAC Information

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BAC

Clone NameB6Ng01-191K18
Chromosome3 (Build37)2 (Build37)
Map Location 60,708,992 - 60,709,718138,657,982 - 138,658,331
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneC130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853
Downstream geneP2ry1, Rap2b, LOC666891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K18.bB6Ng01-191K18.g
ACCGA015105GA015106
length1,163912
definitionB6Ng01-191K18.b B6Ng01-191K18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,708,992 - 60,709,718)(138,657,982 - 138,658,331)
sequence
gaattctgcaggcaccttcactcaactatacataaacacacacacacact
aaatcaatatacaaatacctatataaatatataaatggaaccagaaaata
gactgacaattgtactactactactactactactactagaaaacagaatc
ccagacaaaattaattagaagcgttaaacactgattacaggaaggaacag
tcccccaagatgatatgattctaaacatatgtagaaacatggtgacaagg
atgcaccctgctttataagattaaaaaaaaaacaaactggatataaagtt
gcagatttaccccaatgcaataataatgtaactttagttgacatacattc
aagagttgacaacccattgagacaaaagtaaataaatacataaacagaga
aacaccatagacaaaatgaacaacaaagtaacaacaacaaagcaaacaac
aaacaaacaaacaaaaaaaccaaaccaagaaaaccctacagaatattcca
ctctaattccacagaatggacatttttctcatgagtgctgggattttctc
ttaagtagatcatgtaacaggatatacaccaagggctaacaaatacagaa
aagttgaaataacttgtgttgtatctgaacagaagggaaacagtagtaca
cgttggctcagtgggattgaacaatgtcctattgagtgataaataggtca
ttgaagaagtcagaagagaataaaaaaatccaagagggaaatgaaaagga
aaatatgagaaacaaaagcataaaatacaattaaagcagtttaagaagta
aacatatagacataagtaaccaatataaaagtcaaagatctcaaaagata
actttcgcacttaaaaccttgcaaagcaaagccaagccaaatccaaagtc
agtcaatggaaagaaaaagttaagattggggtaaaattaataatattcag
ataagacccccagcagtccaattcccactagaaaagttgattttctgaca
gtcttcttctttttattctcatcatctgcatgctaaatccttctaaagca
agtattaagctgtgttattatcctgattcatcaagtttcaagaatatgat
tcatggagtgctacctacaaaagaaaggtgtgctttcatttaaatgtcag
taggaaccatatc
gaattctttttgtaaagaaagtttcagaagataaactcatactttacttc
ttaagtgagatcatgagtttctgttctaaacctactgaaactttgtagct
gaggtagactttccactgttttgatgtgagtatcacttgtaaaggatccc
caggctgaagtaaaacagaactgttaatgcatttttgatgagaattaaaa
attcatgaaaaataaaaagtatgataaatatgcaaaggactctggtttga
gtttctatttgtgtatgtggggtatctatgcatgcatgtaggaagcagag
gttggcttgagtatctttgcctatcactctctcttctgcttattattttt
tatatatatttttattacgtattttgctcaattacatttccaatgctatc
ccaaaagtaccccatcccctccccccatccccctacccacccattcccac
tttttggccctggcgttcccctgtactggggtatataaagtgtatgtgtc
caatgggcctctctttccagtgatggcttactaggtcatcttttgataca
tatgcagctagagtcaagagctccggggtactggttagttcataatgttg
ttgtacctacaggtttgcagatctctttagctccttggttactttctcta
gctcctccattgggggccctgtgatccatccaatagctgactgtgagcat
ccacttctgtgtttgctaggctccggcattgtctcacaagagacagctat
atcagggtcctttcagcaaactcttgctagtgtatgcaatggtgtcattg
tttggaggctaattatgggatgggtcgctggatatggtagtctctagatg
gtccatcctttcaactcagctccaaactttgtctctgtaactccttccat
gggtgactgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60708992_60709718
seq2: B6Ng01-191K18.b_491_1206

seq1  AACAAACAAACAAACAAAAAAACCAAACCAAGAAAACCCTACAGAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAAAAAACCAAACCAAGAAAACCCTACAGAATATT  50

seq1  CCACTCTAATTCCACAGAATGGACATTTTTCTCATGAGTGCTGGGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTAATTCCACAGAATGGACATTTTTCTCATGAGTGCTGGGATTTT  100

seq1  CTCTTAAGTAGATCATGTAACAGGATATACACCAAGGGCTAACAAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGTAGATCATGTAACAGGATATACACCAAGGGCTAACAAATACA  150

seq1  GAAAAGTTGAAATAACTTGTGTTGTATCTGAACAGAAGGGAAACAGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTGAAATAACTTGTGTTGTATCTGAACAGAAGGGAAACAGTAGT  200

seq1  ACACGTTGGCTCAGTGGGATTGAACAATGTCCTATTGAGTGATAAATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTTGGCTCAGTGGGATTGAACAATGTCCTATTGAGTGATAAATAGG  250

seq1  TCATTGAAGAAGTCAGAAGAGAATAAAAAAATCCAAGAGGGAAATGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAGAAGTCAGAAGAGAATAAAAAAATCCAAGAGGGAAATGAAAA  300

seq1  GGAAAATATGAGAAACAAAAGCATAAAATACAATTAAAGCAGTTTAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATGAGAAACAAAAGCATAAAATACAATTAAAGCAGTTTAAGAA  350

seq1  GTAAACATATAGACATAAGTAACCAATATAAAAGTCAAAGATCTCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATATAGACATAAGTAACCAATATAAAAGTCAAAGATCTCAAAAG  400

seq1  ATAACTTTCGCACTTAAAACCTTGCAAAGCAAAGCCAAGCCAAATCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTCGCACTTAAAACCTTGCAAAGCAAAGCCAAGCCAAATCCAAA  450

seq1  GTCAGTCAATGGAAAGAAAAAGTTAAGATTGGGGTAAAATTAAT-ATATT  499
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCAGTCAATGGAAAGAAAAAGTTAAGATTGGGGTAAAATTAATAATATT  500

seq1  CAGATAAGA-CCCCAGCAGTCCAATTCCCACTAG-AAAGTTGATTTTCTG  547
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  CAGATAAGACCCCCAGCAGTCCAATTCCCACTAGAAAAGTTGATTTTCTG  550

seq1  ACAGTC-TCTTC-TTTTATTCTCATCATCTGGCATGCTAAATCCTTCTTA  595
      |||||| ||||| ||||||||||||||||| |||||||||||||||| ||
seq2  ACAGTCTTCTTCTTTTTATTCTCATCATCT-GCATGCTAAATCCTTC-TA  598

seq1  AAGCAAGTTATTAAGCTGTGTTAATAATTCCTGATTTCATCAAGTTTCAA  645
      ||||||| ||||||||||||||| ||  |||||| |||||||||||||||
seq2  AAGCAAG-TATTAAGCTGTGTTATTA--TCCTGA-TTCATCAAGTTTCAA  644

seq1  G-ATATGAATCAATGAGTGTTTACTTACCAAAAAGAAAGGTGTTGCTTTT  694
      | |||||| |||  |||||  ||| |||  |||||||||||| |||  ||
seq2  GAATATGATTCATGGAGTG-CTACCTAC--AAAAGAAAGGTG-TGC--TT  688

seq1  TCATTTTTAAAAAATTGTCAGTAGG-ACCATATC  727
      ||||||      || |||||||||| ||||||||
seq2  TCATTT------AAATGTCAGTAGGAACCATATC  716

seq1: chr2_138657982_138658331
seq2: B6Ng01-191K18.g_65_414

seq1  GAATTCTTTCTGGAAGGAAAGTTTCAGAAGATAAACTCATACTTTACTTC  50
      ||||||||| || || ||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGTAAAGAAAGTTTCAGAAGATAAACTCATACTTTACTTC  50

seq1  TGAAGTGAGACCATGAGTTTCTGTTCTAAACCTACTGAAACTTTGTAGCT  100
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGAGATCATGAGTTTCTGTTCTAAACCTACTGAAACTTTGTAGCT  100

seq1  GAGGTAGACTTTCCACTGTTTTGATGTGAGTATCTCTTGTGAAGGATCCC  150
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  GAGGTAGACTTTCCACTGTTTTGATGTGAGTATCACTTGTAAAGGATCCC  150

seq1  CAGGCTGAAGTGAAACAGAACTGTTAATGCATTTTTGATGAGAATTAAAA  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGAAGTAAAACAGAACTGTTAATGCATTTTTGATGAGAATTAAAA  200

seq1  ATTCATGAAAAATAAAAAGTATGATAAATATGCAAAGGAATCTGGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTCATGAAAAATAAAAAGTATGATAAATATGCAAAGGACTCTGGTTTGA  250

seq1  GTTTCTAATTGTGTATGTGGGTTATCTATGCATGCATGTAGGAAGCAGAG  300
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTTCTATTTGTGTATGTGGGGTATCTATGCATGCATGTAGGAAGCAGAG  300

seq1  GTTGACTTGAGTATCTTTGCCTATCACTCTCTCTTCTGCTTATTATTTTT  350
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTTGAGTATCTTTGCCTATCACTCTCTCTTCTGCTTATTATTTTT  350