BAC Information

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BAC

Clone NameB6Ng01-191K20
Chromosome3 (Build37)
Map Location 120,686,182 - 120,687,290
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K20.bB6Ng01-191K20.g
ACCGA015109GA015110
length1,1041,165
definitionB6Ng01-191K20.b B6Ng01-191K20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagggtggcttctctacgaaggttgcctcttctcaggtctcat
catcaaacaccgaacaatatttacatgtttcatcttgttgttacaccagc
catgtgagtacacttgccagataactgagcattcaaatttccttgaatgg
tggcaaagcactgcttgaaatcatgcgaacaaacccaggttgcagatctg
atggttgccggcaatgcctgcttgcctggtgcattctgtttaatatatca
tatccatctgctggtgggaagttggctttcagaatagctgaggacatcgt
ccccgagcctctgaaagtgtccagtcataaacggataaaacctatgcagt
gtcttcatgcatagcagtgcagtaggagacgccaggacttttttttttcc
ttctttttttctaaaataggcttaagttaaaaaacacacactgtgaagca
tttgtctggtttaaataatttaacaggtcttacgtccccgcttcagtcaa
tttcaaccgaaatgcttctccggagggttctccttgtgaacatcaccagg
ctaatcctgtgatgacccacttggagccagctggctggggacagagtagt
ggaggcttggtggtcccagggagggtgggaaaggaggcacctcaagtgta
cctttggggaaaatgcaaacttttcttgcggtagagcggtagagcgtgtg
tgcgttagtattcagagcctgttggcccattgtttgtgactccagccttc
tcagcagaacacgcggcagatggcttacatttgcattagcctcctggaga
acgaatctgctaccaacaacataagctgcagcttttccttttcagaattt
acaacaaattggccagaatggcaattaaaaaaaaaaaaacaaaaaaaaaa
aggaaggaggaagggaaataaaaaaaaaaaaccccatcaggctatcagct
tcaccacttccacgcatcccttttctgaataaggtaaagaatcctctttc
ctccaactgtgtcaatttgcactccccctcaatgttttataaaatgaatc
aagtagtcaatatgcaaacgacttttataaaggacctttctttcgcccac
agtc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccatctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaaaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgattagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgttgagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgtaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgcccacagtcagctatggatggatcacagggctccca
atggaggagctagagaaagtacccaggagctaaagggatctgcaccctat
aggtggatcaacatatgactaccagtaccccgagctctgactctagctgc
aatatgtatcaaagattgcttagtccgcatcactggtaagaagcccatgg
aacacgcaaaccttaatgctagtcaggacgcatgccaatgggagtgccgt
ctaggggactgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120686182_120687290
seq2: B6Ng01-191K20.b_45_1148 (reverse)

seq1  GACTGTGGGGCAAAAAGAAAGGTCTTTTTATAAAAGTCGTTTTGCATAAT  50
      |||||||||    |||||||||||  ||||||||||||| |||||||| |
seq2  GACTGTGGG--CGAAAGAAAGGTC-CTTTATAAAAGTCG-TTTGCATATT  46

seq1  GAACTACCTGAATCATTTTAATAAACATTTGAGGGGAGTGCAAA-TGACA  99
      | ||||| ||| ||||||||  |||||||   |||||||||||| |||||
seq2  G-ACTACTTGATTCATTTTATAAAACATTGAGGGGGAGTGCAAATTGACA  95

seq1  CAGTTGGAG--AAGA-GATCTTTTACCCTATTCAGAAAGGGGATGGCGTG  146
      |||||||||  |||| |||  |||||| |||||||||| ||||| |||||
seq2  CAGTTGGAGGAAAGAGGATTCTTTACCTTATTCAGAAAAGGGAT-GCGTG  144

seq1  GAAGTGGTGAAGCTGATAG-CTGATGGGGTTTTTTTTTTTTTTTTCTTTC  195
      ||||||||||||||||||| ||||||||||||||||||||| ||||   |
seq2  GAAGTGGTGAAGCTGATAGCCTGATGGGGTTTTTTTTTTTTATTTC---C  191

seq1  CTTCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTGCCATTCT  245
      ||||| | |||  ||||||||||| |||||||||||||||||||||||||
seq2  CTTCC-TCCTTCCTTTTTTTTTTTGTTTTTTTTTTTTTAATTGCCATTCT  240

seq1  GGCCAATTTGTTGTAAATTCTGAAAAGGAAAAGCTGCAGCTTATGTTGTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATTTGTTGTAAATTCTGAAAAGGAAAAGCTGCAGCTTATGTTGTT  290

seq1  GGTAGCAGATTCGTTCTCCAGGAGGCTAATGCAAATGTAAGCCATCTGCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAGATTCGTTCTCCAGGAGGCTAATGCAAATGTAAGCCATCTGCC  340

seq1  GCGTGTTCTGCTGAGAAGGCTGGAGTCACAAACAATGGGCCAACAGGCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTTCTGCTGAGAAGGCTGGAGTCACAAACAATGGGCCAACAGGCTC  390

seq1  TGAATACTAACGCACACACGCTCTACCGCTCTACCGCAAGAAAAGTTTGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACTAACGCACACACGCTCTACCGCTCTACCGCAAGAAAAGTTTGC  440

seq1  ATTTTCCCCAAAGGTACACTTGAGGTGCCTCCTTTCCCACCCTCCCTGGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCCAAAGGTACACTTGAGGTGCCTCCTTTCCCACCCTCCCTGGG  490

seq1  ACCACCAAGCCTCCACTACTCTGTCCCCAGCCAGCTGGCTCCAAGTGGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAAGCCTCCACTACTCTGTCCCCAGCCAGCTGGCTCCAAGTGGGT  540

seq1  CATCACAGGATTAGCCTGGTGATGTTCACAAGGAGAACCCTCCGGAGAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGGATTAGCCTGGTGATGTTCACAAGGAGAACCCTCCGGAGAAG  590

seq1  CATTTCGGTTGAAATTGACTGAAGCGGGGACGTAAGACCTGTTAAATTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCGGTTGAAATTGACTGAAGCGGGGACGTAAGACCTGTTAAATTAT  640

seq1  TTAAACCAGACAAATGCTTCACAGTGTGTGTTTTTTAACTTAAGCCTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAGACAAATGCTTCACAGTGTGTGTTTTTTAACTTAAGCCTATT  690

seq1  TTAGAAAAAAAGAAGGAAAAAAAAAAGTCCTGGCGTCTCCTACTGCACTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAAAAGAAGGAAAAAAAAAAGTCCTGGCGTCTCCTACTGCACTG  740

seq1  CTATGCATGAAGACACTGCATAGGTTTTATCCGTTTATGACTGGACACTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCATGAAGACACTGCATAGGTTTTATCCGTTTATGACTGGACACTT  790

seq1  TCAGAGGCTCGGGGACGATGTCCTCAGCTATTCTGAAAGCCAACTTCCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCTCGGGGACGATGTCCTCAGCTATTCTGAAAGCCAACTTCCCA  840

seq1  CCAGCAGATGGATATGATATATTAAACAGAATGCACCAGGCAAGCAGGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGATGGATATGATATATTAAACAGAATGCACCAGGCAAGCAGGCA  890

seq1  TTGCCGGCAACCATCAGATCTGCAACCTGGGTTTGTTCGCATGATTTCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGGCAACCATCAGATCTGCAACCTGGGTTTGTTCGCATGATTTCAA  940

seq1  GCAGTGCTTTGCCACCATTCAAGGAAATTTGAATGCTCAGTTATCTGGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCTTTGCCACCATTCAAGGAAATTTGAATGCTCAGTTATCTGGCA  990

seq1  AGTGTACTCACATGGCTGGTGTAACAACAAGATGAAACATGTAAATATTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTCACATGGCTGGTGTAACAACAAGATGAAACATGTAAATATTG  1040

seq1  TTCGGTGTTTGATGATGAGACCTGAGAAGAGGCAACCTTCGTAGAGAAGC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTGTTTGATGATGAGACCTGAGAAGAGGCAACCTTCGTAGAGAAGC  1090

seq1  CACCCTAAGAATTC  1109
      ||||||||||||||
seq2  CACCCTAAGAATTC  1104