BAC Information

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BAC

Clone NameB6Ng01-192D06
Chromosome3 (Build37)
Map Location 66,511,270 - 66,512,382
singlet/doubletsinglet
Overlap genenone
Upstream geneCcnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
Downstream geneLOC625115, Shox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192D06.bB6Ng01-192D06.g
ACCGA015500GA015501
length1,1981,089
definitionB6Ng01-192D06.b B6Ng01-192D06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcctttttaccagctgagtattttatcaaatgcaccacatttt
ctgtatccatttccttgttaaaggacatctgggttctttccagcttctgg
ttattataaataaggctgctatgaacatagtggagcatctgttcttatta
catgttggaatcttctgggtatatgcccaggagtggtatagatgggtcct
caggtcctatgtctaattttatgaagaaaattggagtctatcctaaaagt
tgttgcctgtatgtgggatatgttcttctagctgggctgccttttctggc
ctcagtgggagagaaagtgcctagcctcacagagtcttgaagtgccaggg
tggtgaggatacccagggtgatccctaccctctcagtggagaaggggagc
gagaattgtgggatgggttaaccactgggagggggacagtgagtgagatg
caatgtgaataagtaaacaaacaaacaaagtcccaaacaaaacacacaac
agcagaaataacacacagaacacacatatacacatgaaaagagaaggaaa
gggaaagaaaagagaagaaaagaaaggaaaagggcagatttcccaggata
tcaaccaaacatggcataacaagttgcaatccaaccagtctcttccccca
ttattaaggctgaacaaggcaatccagcaggagaaaagtggtctcaaaag
caggaaaaggaggcaggagcagctcctactcccgctattaggaatcccac
aatagcatcaagctacacaactgtgacatatgcagagggccttggtcaga
cccatggaggctccatgactgctagtgaagtctctgtaaaggctacactc
ttaaaggaaactaacaccctcccagtggctatcgattgctaatatcttct
tcccaggaagggttgggactttctgcctccgctcccttctgtgctgggat
ttggtctggtttgagtgacatagatctatgcatgctgtcatcacgagttc
atgtgtggagctactttgctgtgtctagacccacctgcttccctgtagta
acctgtggcctctggaaccttacaatgttttcctctccctctttcacagt
gaatctcggtccttgagtagggtggtttatgccacttagtggaacattca
gcatctctggctggaacccctggccataattggtggagcctcccagtg
gaattcatcgcgtccataggtagtgatgctcaagatgagtagtgggcaga
ggggcgagaggagggcaaagcagcctccccactgtggaaaaggaaacagg
actcaatgagaacagccaatggcaaagcaggctattgtatgagaggtcag
ggatttctatttcatgatcttgagtcttcttggttttattcccttttatt
acgagataaatggttgctcaaacacaaaacgctctaacttcttgtcactg
ctgcctggtgctcagagagctcttttgctccacaccaagaactctgtgcc
ccaagtgctccatgccacatttctctgcacacccacatctctctgtgtca
tgtataatttcatcctccctttcaagatctaaattgagaagcatttgcaa
tgtggtcctcatctttaggaatatgggagaggcaatgtgacgtaagggaa
ggaattccaactttcagagacacagtgctctacagattacctttaaaagg
ttatgaacattccgtgaagcagggttctcttgtctcataatctataaaat
ggtataatatgtagtctaagaagaatgtgtgatttttacttgaaatgttt
attacaatgcttaaatggaataatgaaatgaagtacctagaatagtgcct
agtgatatgaaggtatggataaatgtttagatttgtatacttagcacaaa
ataactacgtgatgagcttatatcacataataaagaaaattcccttctca
atgataccttggtcaaggaaggaataaagaaagaaattaaagacttttta
gagtttaatgacaatgaagccacaacgtacccaaacctttgggacacaat
gaaagcatttctaagagggaaactcatagctatgagtgccttcagaaaaa
acgggagagagcacatactagcagcttgacacacatctaaagctctagaa
aaaaaaggaagcaaattcacccagagagtagacggcaggaaatatcaact
caggtgaaatcaccagtgaaacagaggacttatcaagattaacaacgagg
agtggtcctgagaaatcacaggatagataacctttagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66511270_66512382
seq2: B6Ng01-192D06.g_65_1153

seq1  GAATTCATCGCGTCCATAGGTAGTGATGCTCAAGATGAGTAGTGGGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGCGTCCATAGGTAGTGATGCTCAAGATGAGTAGTGGGCAGA  50

seq1  GGGGCGAGAGGAGGGCAAAGCAGCCTCCCCACTGTGGAAAAGGAAACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGAGAGGAGGGCAAAGCAGCCTCCCCACTGTGGAAAAGGAAACAGG  100

seq1  ACTCAATGAGAACAGCCAATGGCAAAGCAGGCTATTGTATGAGAGGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGAGAACAGCCAATGGCAAAGCAGGCTATTGTATGAGAGGTCAG  150

seq1  GGATTTCTATTTCATGATCTTGAGTCTTCTTGGTTTTATTCCCTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTATTTCATGATCTTGAGTCTTCTTGGTTTTATTCCCTTTTATT  200

seq1  ACGAGATAAATGGTTGCTCAAACACAAAACGCTCTAACTTCTTGTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGATAAATGGTTGCTCAAACACAAAACGCTCTAACTTCTTGTCACTG  250

seq1  CTGCCTGGTGCTCAGAGAGCTCTTTTGCTCCACACCAAGAACTCTGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGTGCTCAGAGAGCTCTTTTGCTCCACACCAAGAACTCTGTGCC  300

seq1  CCAAGTGCTCCATGCCACATTTCTCTGCACACCCACATCTCTCTGTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTCCATGCCACATTTCTCTGCACACCCACATCTCTCTGTGTCA  350

seq1  TGTATAATTTCATCCTCCCTTTCAAGATCTAAATTGAGAAGCATTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATTTCATCCTCCCTTTCAAGATCTAAATTGAGAAGCATTTGCAA  400

seq1  TGTGGTCCTCATCTTTAGGAATATGGGAGAGGCAATGTGACGTAAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCCTCATCTTTAGGAATATGGGAGAGGCAATGTGACGTAAGGGAA  450

seq1  GGAATTCCAACTTTCAGAGACACAGTGCTCTACAGATTACCTTTAAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCAACTTTCAGAGACACAGTGCTCTACAGATTACCTTTAAAAGG  500

seq1  TTATGAACATTCCGTGAAGCAGGGTTCTCTTGTCTCATAATCTATAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAACATTCCGTGAAGCAGGGTTCTCTTGTCTCATAATCTATAAAAT  550

seq1  GGTATAATATGTAGTCTAAGAAGAATGTGTGATTTTTACTTGAAATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAATATGTAGTCTAAGAAGAATGTGTGATTTTTACTTGAAATGTTT  600

seq1  ATTACAATGCTTAAATGGAATAATGAAATGAAGTACCTAGAATAGTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATGCTTAAATGGAATAATGAAATGAAGTACCTAGAATAGTGCCT  650

seq1  AGTGATATGAAGGTATGGATAAATGTTTAGATTTGTATACTTAGCACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATGAAGGTATGGATAAATGTTTAGATTTGTATACTTAGCACAAA  700

seq1  ATAACTACGTGATGAGCTTATATCACATAATAAAGAAAATTCCCTTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTACGTGATGAGCTTATATCACATAATAAAGAAAATTCCCTTCTCA  750

seq1  ATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTTA  800

seq1  GAGTTTAATGACAATGAAGCCACAACGTACCCAAACCTTTGGGACACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAATGACAATGAAGCCACAACGTACCCAAACCTTTGGGACACAAT  850

seq1  GAAAGCATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTCAAGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAAGCATTTCTAAGAGGGAAACTCATAGCTATGAGTGCCTTC-AGAAAA  899

seq1  AACGGGAGAGAGCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTA  950
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  AACGGGAGAGAGCACATACTAGCAGCTTGAC-ACACATCT-AAAGCTCTA  947

seq1  GAAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAA  1000
      ||||||||||||||||||||||||| ||| |||||||||||||||||| |
seq2  GAAAAAAAAGGAAGCAAATTCACCC-AGA-GAGTAGACGGCAGGAAAT-A  994

seq1  TCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAA  1050
      || ||||||  ||||||||||  | ||| ||||||   || |||  ||||
seq2  TC-AACTCA--GGTGAAATCA--CCAGT-GAAACA--GAGGACTTATCAA  1036

seq1  AGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGA  1100
         ||||||  ||||||||| |||| |  |||| ||||| ||| ||||||
seq2  --GATTAAC--AACGAGGAG-TGGTCC--TGAG-AAATC-ACAGGATAGA  1077

seq1  TAAACCCTTAGCT  1113
      | |||| ||||||
seq2  T-AACCTTTAGCT  1089