BAC Information

Click to search

BAC

Clone NameB6Ng01-192D20
Chromosome3 (Build37)
Map Location 106,974,486 - 106,975,292
singlet/doubletsinglet
Overlap genenone
Upstream geneChi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2
Downstream geneKcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17, Ubl4b, Alx3, 6330569M22Rik, Ahcyl1, Csf1, LOC280047, Eps8l3, Gstm5, LOC671031, Gstm7, Gstm6, LOC668674, Gstm3, LOC624701, Gstm2, Gstm1, LOC100043641, Gstm4, Ampd2, Gnat2, Gnai3, Gpr61, LOC100043654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192D20.bB6Ng01-192D20.g
ACCGA015528GA015529
length8071,088
definitionB6Ng01-192D20.b B6Ng01-192D20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggtctgggctctgggatgttcagcaggccattttattttct
tttaatgacatagatcttcatctataaaacaaaaaatgttgagtttttta
atggtctctagcactaaaattctgtggtttcacttctgaattcatccaaa
ctgtcttggtaatgaaagctgagacactggacatctcactttgaccgcgt
gggctctgtccttggtgctgagatcctggacattagagcattgaccactg
gtcaccctagggttgtgggaaggagctgattctcacatacacatgaaaag
atggagtgccactgaaaaatttttgatgatttctaaaagttatttcctta
aatattactttacccagcatgacacagactttgggctcgaaggcctttaa
cagaaatatgtatagttaaataatttgatttggaacgtttgtggatcact
ctggaatttgagggcatgatagtagattccaggagtttaggatgctgctc
aaatagtaatcattcattacatgccttcaataagttattacaatgctcct
gaaatcataatattttgctatatgtctataactcatccccatgttatcca
ttggccatggcagtagtttaagtctcatgtctactgataggtctagattg
agggctttgaaatgataactcttgtagctagaatctgtttgatttttctt
gtgttgatattgtaaacccccctggatcagatattaccagaatattcatt
ctctctctctttccctctctctctctctctctctctctctctctctctct
ctcgctc
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaaaatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttaagtgaagttccttga
tttacttagatttgaccttagtacaaggagataaaggagtatggatcgat
tcgcattcttctacatgatagcaaccagttgtgccagcaccaattgttga
aaatgctgtctttcttccactggatggttttagctcccttgtcgaagatc
aagtgaccataggtgtgtgggttcatttctgggtcttcaattctattcca
ttggtctacttgtctgtctctataccagtaccatgcagtttttatcacaa
ttgctctgtagtaaagctttaggtcaggcatggtgattccaccagaggtt
cttttatccttgagaagagtttttgctatcctaggttttttgttattcca
gatgaatttgcaaattgctccttctaattcgttgaagaattgagttggaa
ttttgatggggattgcattgaacctgtagattgcttttggtaagatagcc
atttttacaatgttgatcctgccaatccatgagcatgggagatccttcca
tcttctgagatcttctttaatttctttcttcagagacttgaagtttttaa
acatccctaatcatcaagggaaatgcaaatcaaaacaccctgagatttcc
actcacacagtcagaatggctaagatcaaaattcagtgacagcagatgct
ggcgtgatgtggagaagagacactctcaattgtgttggatgcagctgtac
accactccttggaaatcagtctgcgttcctcaagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106974486_106975292
seq2: B6Ng01-192D20.b_46_852 (reverse)

seq1  GAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAAGA  50

seq1  GAGAGAGAATGAATATTCTGGTAATATCTGATCCAGGGGGGTTTACAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAATGAATATTCTGGTAATATCTGATCCAGGGGGGTTTACAATA  100

seq1  TCAACACAAGAAAAATCAAACAGATTCTAGCTACAAGAGTTATCATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACAAGAAAAATCAAACAGATTCTAGCTACAAGAGTTATCATTTCA  150

seq1  AAGCCCTCAATCTAGACCTATCAGTAGACATGAGACTTAAACTACTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTCAATCTAGACCTATCAGTAGACATGAGACTTAAACTACTGCCA  200

seq1  TGGCCAATGGATAACATGGGGATGAGTTATAGACATATAGCAAAATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAATGGATAACATGGGGATGAGTTATAGACATATAGCAAAATATTA  250

seq1  TGATTTCAGGAGCATTGTAATAACTTATTGAAGGCATGTAATGAATGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCAGGAGCATTGTAATAACTTATTGAAGGCATGTAATGAATGATT  300

seq1  ACTATTTGAGCAGCATCCTAAACTCCTGGAATCTACTATCATGCCCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGAGCAGCATCCTAAACTCCTGGAATCTACTATCATGCCCTCAA  350

seq1  ATTCCAGAGTGATCCACAAACGTTCCAAATCAAATTATTTAACTATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAGTGATCCACAAACGTTCCAAATCAAATTATTTAACTATACAT  400

seq1  ATTTCTGTTAAAGGCCTTCGAGCCCAAAGTCTGTGTCATGCTGGGTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTAAAGGCCTTCGAGCCCAAAGTCTGTGTCATGCTGGGTAAAG  450

seq1  TAATATTTAAGGAAATAACTTTTAGAAATCATCAAAAATTTTTCAGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTAAGGAAATAACTTTTAGAAATCATCAAAAATTTTTCAGTGGC  500

seq1  ACTCCATCTTTTCATGTGTATGTGAGAATCAGCTCCTTCCCACAACCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATCTTTTCATGTGTATGTGAGAATCAGCTCCTTCCCACAACCCTA  550

seq1  GGGTGACCAGTGGTCAATGCTCTAATGTCCAGGATCTCAGCACCAAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACCAGTGGTCAATGCTCTAATGTCCAGGATCTCAGCACCAAGGAC  600

seq1  AGAGCCCACGCGGTCAAAGTGAGATGTCCAGTGTCTCAGCTTTCATTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCACGCGGTCAAAGTGAGATGTCCAGTGTCTCAGCTTTCATTACC  650

seq1  AAGACAGTTTGGATGAATTCAGAAGTGAAACCACAGAATTTTAGTGCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTTTGGATGAATTCAGAAGTGAAACCACAGAATTTTAGTGCTAG  700

seq1  AGACCATTAAAAAACTCAACATTTTTTGTTTTATAGATGAAGATCTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTAAAAAACTCAACATTTTTTGTTTTATAGATGAAGATCTATGT  750

seq1  CATTAAAAGAAAATAAAATGGCCTGCTGAACATCCCAGAGCCCAGACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGAAAATAAAATGGCCTGCTGAACATCCCAGAGCCCAGACCCT  800

seq1  GGAATTC  807
      |||||||
seq2  GGAATTC  807