BAC Information

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BAC

Clone NameB6Ng01-192G13
Chromosome3 (Build37)
Map Location 27,466,934 - 27,468,117
singlet/doubletsinglet
Overlap geneFndc3b
Upstream geneSpata16, LOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr
Downstream geneE030011K20Rik, Pld1, Tnik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192G13.bB6Ng01-192G13.g
ACCGA015656GA015657
length1,1931,153
definitionB6Ng01-192G13.b B6Ng01-192G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgtttaatgacccaaatttgaaagagtgcttctttttaaca
agcagcaatctgaaactctttctaacaggcatacaaactacaggaaactt
caattacataaagcaaaccttcatgaacctggacagttggatcctaccag
cagcaagcaacaaactccttaggatatctttcttccctcctatgatgtgg
ctggaattgcaggcattcccatgggcatttctgatagtctgaaccacttt
tgaaactgggttctaaaaatatcacatgctgtcaatccctgtatgttcaa
tatatgggaaatcattatcgccctggtatctcatacttcagttggaacag
aaacaaacccactagcatcattgccacacaatgatcaactgaccactgag
aacaaaatactgctgtttctagttctggactcatgaaacattgcagctga
tggctcggttcactttagagttagagcctgccaacaggatcgtccgactc
cagtccaaaggagactgtgctttgtactatttcttcctccctcccaaagt
agaccttaggtcttcagtgttcaaattaactatactgattactgacacac
ctatgtttgcttattaaataagtaatacaataataccacttccaatcctt
aaaatactatagctatgttccaagaatttactatatattttcaaaatagt
tccattaccataattctagcccaatggcaggataataaggcattagatga
gatgttattttttaaattttcaatattactttttgaagtatgtcagcaaa
atctcaaccttccaagaatgtaaagattgatcttatgattctacctgtgg
gcttcacccaaaacagcagcaaaaatttcctggctaaaaatccttccctc
tggacataaaaaggaatattttcttccttaatatcttagttcaattcttt
ttcacgatcatactcgttatattatgattatattacattcatataatatg
caagccattttttgcattttggctaaaagttcaacaccacatacatacta
aaaacacatactaaaaagtacgccacatgcccccaccattatactactta
aaaatttaatcctttcattgtactgatttaatccatacctgtttccattt
ttatttaacacttgcctgaaggaccagaaaaaaaatgtgacag
gaattcttagtaaagcagtttgccctgtataatgtaagtgggcttcatgc
aatcagttgaacacttaggggaggcagaaaaggctgttgccctcccggaa
ggacttctgtacactgtctttgcacttgagctgagatgtctctggggctc
cagcctggtagactcttctatgatttgttagaacatatgtcttaaaaatc
tctctcatctctctgtctttcttttatatatacagtctattgatgccgac
aaactcttatatagcacttgatcactatatatatatgtaatcttcaagat
aatctcactcagtttacaaaccacctgatgagaagcccaaagttgaagct
tattcttcttcatggggatgatgaatagaaaggcaggtagtaaatgttag
ttaagcatgttaagaagtaaaacttaccctaataagaataaatagctggg
tcgggcagtggtggcacatgcctttaatcccagcacttgggagacagagg
caggcagatctctgtgagttggaggccagcctggtctacagagtaagttc
caggacagccagggatacaaaagctcctgtctcagcacacctacaaaata
ctcctgaacttaaggcttgggggacattggggaaaatggagcaggaagat
tgtaaaggccagaagataagggagtttgctttacgagagtgtctcctaga
aatagcaaaggctgcacccataacgtctcaccaccaagactgcccaaagt
agacaagcaaaagcccacaatgctcaaccctactcaaggaactccaggca
gccgaggaaagctgggagcagggaaggtggccttccccagggaagagcac
aactgattgctcgtccagaagcaaatggtcagccctgaagacatgcgtcc
taagtgacgtgatatggactgagcaggttgtttaggaatattatattgta
tactctaagcatgccatatgagtaaagaagaggcaatgattgtcgaaagg
ggtgggggagcatatcaggagacctggagggaagagaagagaaatgttat
atattatcctcaccataactcaaaatacatatgtatacttttatttctta
atttaactaaaacgtggaaatgactagagtctcatgtaatctaaaattgg
tca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_27466934_27468117
seq2: B6Ng01-192G13.b_48_1240

seq1  GAATTCCTTTGTTTAATGACCCAAATTTGAAAGAGTGCTTCTTTTTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTTTAATGACCCAAATTTGAAAGAGTGCTTCTTTTTAACA  50

seq1  AGCAGCAATCTGAAACTCTTTCTAACAGGCATACAAACTACAGGAAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAATCTGAAACTCTTTCTAACAGGCATACAAACTACAGGAAACTT  100

seq1  CAATTACATAAAGCAAACCTTCATGAACCTGGACAGTTGGATCCTACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACATAAAGCAAACCTTCATGAACCTGGACAGTTGGATCCTACCAG  150

seq1  CAGCAAGCAACAAACTCCTTAGGATATCTTTCTTCCCTCCTATGATGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCAACAAACTCCTTAGGATATCTTTCTTCCCTCCTATGATGTGG  200

seq1  CTGGAATTGCAGGCATTCCCATGGGCATTTCTGATAGTCTGAACCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTGCAGGCATTCCCATGGGCATTTCTGATAGTCTGAACCACTTT  250

seq1  TGAAACTGGGTTCTAAAAATATCACATGCTGTCAATCCCTGTATGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGGGTTCTAAAAATATCACATGCTGTCAATCCCTGTATGTTCAA  300

seq1  TATATGGGAAATCATTATCGCCCTGGTATCTCATACTTCAGTTGGAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGAAATCATTATCGCCCTGGTATCTCATACTTCAGTTGGAACAG  350

seq1  AAACAAACCCACTAGCATCATTGCCACACAATGATCAACTGACCACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACCCACTAGCATCATTGCCACACAATGATCAACTGACCACTGAG  400

seq1  AACAAAATACTGCTGTTTCTAGTTCTGGACTCATGAAACATTGCAGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATACTGCTGTTTCTAGTTCTGGACTCATGAAACATTGCAGCTGA  450

seq1  TGGCTCGGTTCACTTTAGAGTTAGAGCCTGCCAACAGGATCGTCCGACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGGTTCACTTTAGAGTTAGAGCCTGCCAACAGGATCGTCCGACTC  500

seq1  CAGTCCAAAGGAGACTGTGCTTTGTACTATTTCTTCCTCCCTCCCAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAAAGGAGACTGTGCTTTGTACTATTTCTTCCTCCCTCCCAAAGT  550

seq1  AGACCTTAGGTCTTCAGTGTTCAAATTAACTATACTGATTACTGACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTAGGTCTTCAGTGTTCAAATTAACTATACTGATTACTGACACAC  600

seq1  CTATGTTTGCTTATT-AATAAGTAATACAATAATACCACTTCCAATCCTT  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTATGTTTGCTTATTAAATAAGTAATACAATAATACCACTTCCAATCCTT  650

seq1  AAAATACTATAGCTATGTTCCAAGAATTTACTATATATTTTCAAAATAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTATAGCTATGTTCCAAGAATTTACTATATATTTTCAAAATAGT  700

seq1  TCCATTACCATAATTCTAGCCCAATGGCAGGATAATAAGGCATTAGATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTACCATAATTCTAGCCCAATGGCAGGATAATAAGGCATTAGATGA  750

seq1  GATGTTATTTTTTAAA-TTTCAATATTACTTTTTGAAGTATGTCAGCAAA  798
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GATGTTATTTTTTAAATTTTCAATATTACTTTTTGAAGTATGTCAGCAAA  800

seq1  ATCTCAACCTTCCAAGAATGTAAAGA-TGATCTTATGATTCTACCTGTGG  847
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCTCAACCTTCCAAGAATGTAAAGATTGATCTTATGATTCTACCTGTGG  850

seq1  GCTTCACCCAAAACAGCAGCAAAAATTTCCTGGCTAAAAATTCTTTCCCT  897
      |||||||||||||||||||||||||||||||||||||||| || ||||||
seq2  GCTTCACCCAAAACAGCAGCAAAAATTTCCTGGCTAAAAA-TCCTTCCCT  899

seq1  CTGGACATAAAAAGGAATATTTTCTTCCTTAATATCTTAGTTCAAT--CT  945
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  CTGGACATAAAAAGGAATATTTTCTTCCTTAATATCTTAGTTCAATTCTT  949

seq1  TTTCACGATCATACTCGTTATTATTATGATATAATTACATTCATATAATA  995
      |||||||||||||||||||| |||||||||   |||||||||||||||||
seq2  TTTCACGATCATACTCGTTA-TATTATGATTATATTACATTCATATAATA  998

seq1  TGCAAGCCATTTTTTGCA-TTTGGCTAAAAAGTTCAACA-CACATACATA  1043
      |||||||||||||||||| ||||||| |||||||||||| ||||||||||
seq2  TGCAAGCCATTTTTTGCATTTTGGCT-AAAAGTTCAACACCACATACATA  1047

seq1  CTAAAAACACATACTAAAAAGTACG-CACATGCACACACACATATACTAC  1092
      ||||||||||||||||||||||||| ||||||| | |||   ||||||||
seq2  CTAAAAACACATACTAAAAAGTACGCCACATGCCCCCACCATTATACTAC  1097

seq1  TTAAAAATTTAAT-CATTCATTGTACTGAATTAAATCAATTACTTGTT--  1139
      ||||||||||||| | ||||||||||||| ||||  ||  ||| ||||  
seq2  TTAAAAATTTAATCCTTTCATTGTACTGATTTAATCCA--TACCTGTTTC  1145

seq1  CAATTTTATTTACAACTTGTCTG-AGGACAAG--AAAAAATGTGACAG  1184
      || |||||||||  ||||| ||| ||||| ||  ||||||||||||||
seq2  CATTTTTATTTAACACTTGCCTGAAGGACCAGAAAAAAAATGTGACAG  1193