BAC Information

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BAC

Clone NameB6Ng01-192H01
Chromosome3 (Build37)
Map Location 121,931,596 - 121,931,911
singlet/doubletsinglet
Overlap geneLOC626807
Upstream geneTmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788
Downstream geneLOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192H01.bB6Ng01-192H01.g
ACCGA015680GA015681
length441821
definitionB6Ng01-192H01.b B6Ng01-192H01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cgggatgaaggaaagttcccgcgggaattcctctgtttaggtattgtact
tggctagtttctgtgtcaacttgacacagctggagttatcacacagaaag
gagcttcagttgaggaaatgcctccatgagatccaactgtaaggcatttt
ctcaattagtgatcaagggggaaaggcccttgtgggtgggaccatctcag
ggctggtagtcttggttctataagaaagcaggctgagcaagccaggggag
gcaagccagtacagaacatccctccatggcctctgcatcagctcctgctc
cctgacctgcttgagttccagtcctgacttcctttggtgatgaacagcag
tatggaagtgtaagccaaataaaccctttcctccccaacttgcttcttgg
tcatgatgtttgtgcaggaatagaaaccctgactaagacag
gaattctctgatgaatactaatttcgagttttcgggtaaagcatttttta
cattcactacatttataaggtttctctcctttatgaattctcggatgaat
attaagataagatttttggggaaagcacttatcacattcatgacatttgt
aaggtttctctcctgaatgaattttctgatgaattctcagattgcctttt
tcagtaaagcatttgtcacattcactgcatttgtaaggtttctctccttt
atgaattttctgatgccttctcagactgcctttgtcagtaaagcatttct
cacattcactacatttgtaaggtttctctcttgtatgaattttctgatgc
cttctcagattgcctttttcagtaaagcatttgtcacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgaatactaagataggatt
ttcgggtaaagcatttctcacattcgcatttgtaagggttctctccttta
tgaattctcggatgaatactaagataggatttttggggaaagcacttgtc
acattcatgacatttgtaaggtttctctcctgaatgaattttctgatgaa
ttctcagatttgcctttttcagtaaagcattttgtcacattcactgcatt
ttgtaagtttctcttccttttatgaattttctgatgccttctcagactgc
cttttgtcagtaatagcattttctcacattcactacatttgtaaagtttc
tctcctgtatgaatttttctgatgcccttctcagactgccttttgtcagt
aaagcaatttctcacattcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_121931596_121931911
seq2: B6Ng01-192H01.b_43_441 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  CTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGC  50

seq1  ---------------------------------CTGTCTTAGTCAGGGTT  17
                                       ||  | ||  | |   |
seq2  AAGTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATA--CTGCTGT  98

seq1  TCATCACC-AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGG  66
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGGAGCAGG  148

seq1  AGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCACCT  116
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  AGCTGATGCAGAGGCCATGGAGGGATGTTCTGTACTGGCTTGCCTCCCCT  198

seq1  GGCTTGCTCAGCCTGCTTTCTTATAGAACCAAGACTACCAGCCCAGAGAT  166
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGCTTGCTCAGCCTGCTTTCTTATAGAACCAAGACTACCAGCCCTGAGAT  248

seq1  GATCCCACCCACAAGGGGCCTTTCCCCCTTGATCACTAATTGAGAAAATG  216
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTCCCACCCACAA-GGGCCTTTCCCCCTTGATCACTAATTGAGAAAATG  297

seq1  CCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGCTCCTTTCT  266
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGCTCCTTTCT  347

seq1  CTGTGATAACTCCAGCTGTGTCAAGTTGACACA-AAACTAGCC-AGTACA  314
       |||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  GTGTGATAACTCCAGCTGTGTCAAGTTGACACAGAAACTAGCCAAGTACA  397

seq1  AT  316
      ||
seq2  AT  399