BAC Information

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BAC

Clone NameB6Ng01-192O08
Chromosome3 (Build37)
Map Location 56,965,941 - 56,966,747
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040139, LOC666585
Downstream geneTm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192O08.bB6Ng01-192O08.g
ACCGA016014GA016015
length1,198815
definitionB6Ng01-192O08.b B6Ng01-192O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacacgcataaacttggagacaggagctaatgcagaggccttg
cagaggtgctgcttgctggcttgatactctggctgcctcagtctgctttc
ttatagcacctagaccaccagctcatgagtgaccctatccatagtagact
tggcctttccacatcaattataattaagcaaataccccataggtttaaat
atagcttgatctttggatgcattttctcaaatgagtttcctaactctctg
ttgatcctagcttgtgtcatattgacataaagccagccagttcccaacac
tccccccctcattttttcttccttccatatttcctcactttctcccttcc
ctggtcattttaaaggattagtgactatacgtagagtaaattcactgtga
attctagggaggtgattcattttcaccttttctacgtcccaactagaaat
gaaaggcttggccttcttgagtctggcttcaatagtgtactggctggttt
tgtgtgtcaacttgacacaagctagagttatcacagagaaaggagcttca
gttggggaagtgcctccatgagatgcagctgtggggcattttctcaatta
gtgatcaagggggaagggccccttgtgggtgggaccatccttgggctggg
agtcttgggttctataagagagcaggctgagcaagccaggggaagcaagc
cagtaaagaacatccctccatggcctctgcatcagctcctgctttctgac
ctgcttgagttccagtcctgactttctttggtgataatagcagtgtggaa
atgtaagctgaataaaccctttcctccccaactgcttcttggtcatgatg
tttgtgcaggaatagaaaccctgactaagacaaatagtaacagtagaaat
gaaggcagtataatcaaggagagagttaccagatacaaagtccaggtagc
ccctggctcaggtcaaaagaaaactcttttgtcgatttataaattctttt
ttttcccttcttttggtatttattattacatctcaagtgttatcctcctc
ccattgacccactatcctctccccttgtcttcctgccttctacgaggtgc
ttccccccatctaaccacttcctgctcaatacctaacgcatggttatgag
ctccaggaacagaaggtctcaccctctcattgatagtgcccggaatag
gaattctgcctgggaattcgagtgaccatgtgtgtgctgtgtgcttggag
aagcaccccagacacaacaaacagagtacaagtatggtttatttggaagg
aaggggagggaggacctggagaaggggtagggacagagaaaggagaacag
aggaggtcagaaaggaggatagaaagagatgtcagtcagaaacacatggg
aacagagacagagaagggaggggggagaaaaggtgctatagtagtgagct
gttacctcttatacactgctaagccacccacacctggtggtggcacaagt
agtactggcaggaattgatgacatgactgttgttaagtccctgggaggag
tctagcagaactgtctgtaagccaacatttctcccttcttgtttaattaa
aaataaggaactagaaaaaggttatcatggaggaggaatgacatcactgt
attcttaagactacttcctgatgactttggggtgatggtctgtctttggg
gaccccaacaaaattggaatgctggctaagtcctgggagagctagctgtt
tcactgctgtccaggatctgtggccccatctatggctaagaaagtacagg
cccagtttggagaggtctgtgaggctaggctgaaacacctgtgggtcttc
tctggtgctgtcctggatgcagatttttgagtaaaagtcctagacatgat
gggatactgaaacatatacatgtatttagagggcattaaaaaaagttaac
taggttaagggagaaacacttttcattgcttgagtgtacctatgaaaaac
tttaggcccatggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56965941_56966747
seq2: B6Ng01-192O08.g_66_880

seq1  GAATTCTGCCTGGGAATTCGAGTGACCATGTGTGTGCTGTGTGCTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTGGGAATTCGAGTGACCATGTGTGTGCTGTGTGCTTGGAG  50

seq1  AAGCACCCCAGACACAACAAACAGAGTACAAGTATGGTTTATTTGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCCCAGACACAACAAACAGAGTACAAGTATGGTTTATTTGGAAGG  100

seq1  AAGGGGAGGGAGGACCTGGAGAAGGGGTAGGGACAGAGAAAGGAGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAGGGAGGACCTGGAGAAGGGGTAGGGACAGAGAAAGGAGAACAG  150

seq1  AGGAGGTCAGAAAGGAGGATAGAAAGAGATGTCAGTCAGAAACACATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCAGAAAGGAGGATAGAAAGAGATGTCAGTCAGAAACACATGGG  200

seq1  AACAGAGACAGAGAAGGGAGGGGGGAGAAAAGGTGCTATAGTAGTGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGACAGAGAAGGGAGGGGGGAGAAAAGGTGCTATAGTAGTGAGCT  250

seq1  GTTACCTCTTATACACTGCTAAGCCACCCACACCTGGTGGTGGCACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTCTTATACACTGCTAAGCCACCCACACCTGGTGGTGGCACAAGT  300

seq1  AGTACTGGCAGGAATTGATGACATGACTGTTGTTAAGTCCCTGGGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGGCAGGAATTGATGACATGACTGTTGTTAAGTCCCTGGGAGGAG  350

seq1  TCTAGCAGAACTGTCTGTAAGCCAACATTTCTCCCTTCTTGTTTAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAGAACTGTCTGTAAGCCAACATTTCTCCCTTCTTGTTTAATTAA  400

seq1  AAATAAGGAACTAGAAAAAGGTTATCATGGAGGAGGAATGACATCACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGAACTAGAAAAAGGTTATCATGGAGGAGGAATGACATCACTGT  450

seq1  ATTCTTAAGACTACTTCCTGATGACTTTGGGGTGATGGTCTGTCTTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAGACTACTTCCTGATGACTTTGGGGTGATGGTCTGTCTTTGGG  500

seq1  GACCCCAACAAAATTGGAATGCTGGCTAAGTCCTGGGAGAGCTAGCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAACAAAATTGGAATGCTGGCTAAGTCCTGGGAGAGCTAGCTGTT  550

seq1  TCACTGCTGTCCAGGATCTGTGGCCCCATCTATGGCTAAGAAAGTACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCTGTCCAGGATCTGTGGCCCCATCTATGGCTAAGAAAGTACAGG  600

seq1  CCCAG-TTGGAGAGGTCTGTGAGGCTAGGCTGAAACACCTGTGGGTCTTC  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTGGAGAGGTCTGTGAGGCTAGGCTGAAACACCTGTGGGTCTTC  650

seq1  TCTGGTGCTGTCCTGGATGCAGA-TTTTGAGT-AAAGTCCTAGACATGAT  697
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  TCTGGTGCTGTCCTGGATGCAGATTTTTGAGTAAAAGTCCTAGACATGAT  700

seq1  GGGATACTGAAACATATACATGTA-TTAGA-GGCATTAAAAAAAGTTAAC  745
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  GGGATACTGAAACATATACATGTATTTAGAGGGCATTAAAAAAAGTTAAC  750

seq1  TAGGTT-AGGGAGAAACAC-TTTCATTGCTTGAGTGTACCTATG-AAAAC  792
      |||||| |||||||||||| |||||||||||||||||||||||| |||||
seq2  TAGGTTAAGGGAGAAACACTTTTCATTGCTTGAGTGTACCTATGAAAAAC  800

seq1  TTTAGGCCCATGGTC  807
      |||||||||||||||
seq2  TTTAGGCCCATGGTC  815