BAC Information

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BAC

Clone NameB6Ng01-193B21
Chromosome3 (Build37)
Map Location 114,828,607 - 114,829,691
singlet/doubletsinglet
Overlap genenone
Upstream geneCol11a1, LOC100043220, Olfm3
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193B21.bB6Ng01-193B21.g
ACCGA016179GA016180
length1,085961
definitionB6Ng01-193B21.b B6Ng01-193B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagacgtagaccagggaaggctcaaatcagagatcttc
ctgtctctgcctcctgagtactaagattaaaggtatgtgtcaattcactt
ggctgaatctgtgtttcttatgttaccatttatagctataagagatcaaa
aattgagtttcatagtatctgtacttaattcatgtgccccatttgtggtc
ctacctaaaataatttactatattgcatttttttaacttaattttatttg
taattcattttttacactccatattcccttccccacccctacccatccac
cctccaacttctccacaaccataccttctccctaccccacctcatctcca
attggatgcccccaccacccaccccaccttacttctaaactccctggggc
ctccagtctcttatgggttacatgcttcatcactgaatgaccacagacct
ggaagtcctctactgtgtgtgtgttagggacctcatatcagcttgtgtat
gctgtctgtttggtgggccaatgtttgaaagactgtgggggtccaaatta
attaagactgctggttctcctacagaattgcccttctcagcttctttcag
ccttccctaatttaacaacctgggtcagctgctatatagcatttcttatg
gtctatgtttgagatgatggagaagttgacattaacacttagtgttgttt
gataatgtcatagaaactcaatttgtaggtgtgataaaggatatgattat
acttctttagcaacatgacatttttgattcttctttttaaagtatcttat
ttctgtaagacttggccttttaaaactgcaatggctatatttttcatagt
tgctttaacttgaagatatattttttatttttctcccaaatgttattctt
ataataaaatttaacaaaacaaaaaagttggtgatctgagaacttagaag
ttagtgatgtccttaaatcaaaagtttttcttttagaaaattcaaacttc
gaactagtatatgtaaaattcattacaaggaagtatttttataataaaaa
tattacttttataataaacttaatttcatgtaata
gaattcagtaggattgttacctattcagtaacagtcaaaattacctctag
cattgtgggagagacaggaaaagaaattaggtattgcaatttacttgaat
agagctagaaatctcacggctagtctacatggtaaatacttaggacaata
gctgagccactcccagacacaggaatttacctggcctaggaagaaggtgg
gttgtggtcttagggggaactgaagtattattcatgaaagggttagtaga
acttgcctggtgcctgtttttcactaggcccagaggaatagcataatcaa
gtatttactaaagggcccctcgtggtgggtttaacaatagactagaattg
gaactatggcaagggcatgaagcccttgaccctggcttctaagattaagc
tgactttaagtggggctgcttttgattccagttgttaacattgattttta
tcccaattggttcctgttagcattttgtatacatccctctgttttgtgta
aaagtcacttttaagtcggcttgctttgtgacaaattacattcaggtact
acactcccttgtgtctgtgtctgtttatgaccctttgtcaccgactccct
gcccacctgtaccggaaccctgatttctcctggggactgaggagggacga
ctgaggccagactgtggcaacttcataaacataagatgagcaaagaaaac
aataacagacgtgctaaagtgggctggagaaaggccatcatgcaacagta
ttatacaaagaaccacaggcaactgaagaatcctgagaatgggattccat
cctgagagtgtaatgttcatattacccataaatcaacctttcctagagaa
atgcttatcccaaatcaaatggtcagaactgacacatgcatacattagac
tgagtagttatatttagcaatacacacatattatgcacatacttatattg
tgtttttgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114828607_114829691
seq2: B6Ng01-193B21.b_44_1128 (reverse)

seq1  TATTACCATGAAAATAAAGTTTTATTATAAAAAGTAATATTTTTATTATA  50
      ||||| ||||||| |||   |||||||| |||||||||||||||||||||
seq2  TATTA-CATGAAATTAA--GTTTATTAT-AAAAGTAATATTTTTATTATA  46

seq1  AAAATACTCCTTTGTAAATGAATTTTACATATACTAGTTCTGAAGTTTGA  100
      |||||||| | |||| |||||||||||||||||||||||| |||||||||
seq2  AAAATACTTCCTTGT-AATGAATTTTACATATACTAGTTC-GAAGTTTGA  94

seq1  ATTTTCTAAAAG-AAAACTTTTGATTTTAAGACATCACTAAC-TCTTAGT  148
      |||||||||||| |||||||||||||| | |||||||||||| ||| |||
seq2  ATTTTCTAAAAGAAAAACTTTTGATTTAAGGACATCACTAACTTCTAAGT  144

seq1  TCTCAGATCACCAAC-TTTTTGTTTTG-TAAATTTTA-TATAAGAAT-AC  194
      ||||||||||||||| ||||||||||| ||||||||| ||||||||| ||
seq2  TCTCAGATCACCAACTTTTTTGTTTTGTTAAATTTTATTATAAGAATAAC  194

seq1  ATTTGGGAGAAAAATAAAAAATATATCTTCAAGTTAAAGCAACTATGAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGAAAAATAAAAAATATATCTTCAAGTTAAAGCAACTATGAAA  244

seq1  AATATAGCCATTGCAGTTTTAAAAGGCCAAGTCTTACAGAAATAAGATAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCCATTGCAGTTTTAAAAGGCCAAGTCTTACAGAAATAAGATAC  294

seq1  TTTAAAAAGAAGAATCAAAAATGTCATGTTGCTAAAGAAGTATAATCATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGAAGAATCAAAAATGTCATGTTGCTAAAGAAGTATAATCATA  344

seq1  TCCTTTATCACACCTACAAATTGAGTTTCTATGACATTATCAAACAACAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTATCACACCTACAAATTGAGTTTCTATGACATTATCAAACAACAC  394

seq1  TAAGTGTTAATGTCAACTTCTCCATCATCTCAAACATAGACCATAAGAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTAATGTCAACTTCTCCATCATCTCAAACATAGACCATAAGAAA  444

seq1  TGCTATATAGCAGCTGACCCAGGTTGTTAAATTAGGGAAGGCTGAAAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATAGCAGCTGACCCAGGTTGTTAAATTAGGGAAGGCTGAAAGAA  494

seq1  GCTGAGAAGGGCAATTCTGTAGGAGAACCAGCAGTCTTAATTAATTTGGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAGGGCAATTCTGTAGGAGAACCAGCAGTCTTAATTAATTTGGA  544

seq1  CCCCCACAGTCTTTCAAACATTGGCCCACCAAACAGACAGCATACACAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACAGTCTTTCAAACATTGGCCCACCAAACAGACAGCATACACAAG  594

seq1  CTGATATGAGGTCCCTAACACACACACAGTAGAGGACTTCCAGGTCTGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATGAGGTCCCTAACACACACACAGTAGAGGACTTCCAGGTCTGTG  644

seq1  GTCATTCAGTGATGAAGCATGTAACCCATAAGAGACTGGAGGCCCCAGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCAGTGATGAAGCATGTAACCCATAAGAGACTGGAGGCCCCAGGG  694

seq1  AGTTTAGAAGTAAGGTGGGGTGGGTGGTGGGGGCATCCAATTGGAGATGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGAAGTAAGGTGGGGTGGGTGGTGGGGGCATCCAATTGGAGATGA  744

seq1  GGTGGGGTAGGGAGAAGGTATGGTTGTGGAGAAGTTGGAGGGTGGATGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTAGGGAGAAGGTATGGTTGTGGAGAAGTTGGAGGGTGGATGGG  794

seq1  TAGGGGTGGGGAAGGGAATATGGAGTGTAAAAAATGAATTACAAATAAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTGGGGAAGGGAATATGGAGTGTAAAAAATGAATTACAAATAAAA  844

seq1  TTAAGTTAAAAAAATGCAATATAGTAAATTATTTTAGGTAGGACCACAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTAAAAAAATGCAATATAGTAAATTATTTTAGGTAGGACCACAAA  894

seq1  TGGGGCACATGAATTAAGTACAGATACTATGAAACTCAATTTTTGATCTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACATGAATTAAGTACAGATACTATGAAACTCAATTTTTGATCTC  944

seq1  TTATAGCTATAAATGGTAACATAAGAAACACAGATTCAGCCAAGTGAATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCTATAAATGGTAACATAAGAAACACAGATTCAGCCAAGTGAATT  994

seq1  GACACATACCTTTAATCTTAGTACTCAGGAGGCAGAGACAGGAAGATCTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATACCTTTAATCTTAGTACTCAGGAGGCAGAGACAGGAAGATCTC  1044

seq1  TGATTTGAGCCTTCCCTGGTCTACGTCTACATAGTGAATTC  1085
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGAGCCTTCCCTGGTCTACGTCTACATAGTGAATTC  1085