BAC Information

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BAC

Clone NameB6Ng01-193D14
Chromosome3 (Build37)
Map Location 124,450,956 - 124,451,993
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
Downstream geneLOC668820, Ndst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193D14.bB6Ng01-193D14.g
ACCGA016257GA016258
length9021,031
definitionB6Ng01-193D14.b B6Ng01-193D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaagaatatcgaatggctgagaagcatctaaagaaatg
ttcaacatccttaatcaacagggaaatacaaatcaaaacaagattccacc
tcacaccagtcagaatggctaagatgaaaaactcaggtggcagcagatgt
tggtgaggatctggagaaagaggaacactcttccatttctagtgggattg
caacctggtacaatcactctggaaatcaacctggtggttcctcagaaaat
tgaacatagtattctgaggacccaacgataccactcctgggcatatatcc
aaaagttgttccaacatataacaaggacacacgctctactatgttcatag
cagccttatttataatagccagaagctggaaagaacccagatgtccttca
acagaggaatggatacagaaaatgcggtacatgtgcacaatggagtaaag
ctataaaaaaaaaaacagtgaatacatgaaattcttaggcaaatggatgg
aattaagaaatatcatcctgagtgaggtaacctaatcacaaaagaacaca
aatggtatacactcactgataagtggatattaaccccaaacctggaatac
ccaaaatacaattcacagaccacatgaagctcaagaagaaagataaccca
agtgtggatgctttggaccttcttagaaaggagaacaaaatactcaaggg
aggaaatacagggacaaagtgtagagcagagactgaaggaaaggccatct
agagtttgccccacctagggatccatcccatatacagtcaccaaacccaa
acactattgctgatgctaagaattgcttgctgacaagagcctgatgttgt
ctcctgagatattctgccagaatttgacaaaatacagagaatggtctgag
tg

gaattccacttgcattaggaaagagctctttagttccaaaaagaacaact
tttaagctttataactggaattttagaaaatctcattctgaatgtagata
tatcatcctaagttaccataggaagcagcttcaacagtgttcaggctgtt
ctaagtaaatatgcttaaacaattttttattggttattttatttatttgt
atttcaagcgttatctcctttcctggtttcccctccacaaaccccctatc
tcaacccctttgccaagcttctatgagggtgctccctcacccacccaccc
acttctgcctcactgccctagcattccccttacacaggggcatccattct
tcacagaaccaagggcctcccctcccattgatgccagataaggccttcct
ctgctaccaaataaatacgctaaaagtattgtgtagcatgtgtatgaaca
ttcatatgtatgtttttgttatttttgttaatcaaatgagattatttttt
agaaaacaaaaccatgtgctcattttatttaattatggtgactttatcac
caagtagagaatagtgagtattcactaatgtctacttcagtatacattgc
ttcacttttggattctgcaatgaattcatcctattctgggaaattttcag
tcaatgatgaatacattttcttggaataaaatgaataacttagagccggg
cattgtgacacacacctttaatcccagcacttgggaagcagaggcaggtg
gatttctgagtttgagatcagcctagtctacaaagtgagttccaggacag
cccagggctacacagagaaaccctgtcttgaaaataaaataaaataaaat
aagcaaatggagattaaaagggaaaaagagaaagaaaaattatacagcca
aactaaaaataaatgtaagttaaggctttcccattttttattttaaggtc
tatttttaagcattaaggccaccacatccttacaatcattatatgcaatt
ttttctttctctttctttcaacacaacaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124450956_124451993
seq2: B6Ng01-193D14.g_65_1095 (reverse)

seq1  TGTTGTTGTTGTTGGAAAGAAAGAGAAAGAAAAAATGGCATATAATTGGA  50
      |||||||| |||| |||||||||||||||||||||| |||||||||  ||
seq2  TGTTGTTG-TGTT-GAAAGAAAGAGAAAGAAAAAATTGCATATAAT--GA  46

seq1  TTGTAAGGATGTGGTTGCCCTTAATGCTT-AAAATAGACCCTTAAAAT-A  98
      |||||||||||||| || ||||||||||| |||||||| ||||||||| |
seq2  TTGTAAGGATGTGG-TGGCCTTAATGCTTAAAAATAGA-CCTTAAAATAA  94

seq1  AAAATGGGAAAGCCTTAACTTACATTTATTTTTAGTTTGGCTTGTTATAA  148
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  AAAATGGGAAAGCCTTAACTTACATTTATTTTTAGTTTGGCT--GTATAA  142

seq1  TTTTTCTTTCTCTTTTTTCCCTTTTAATCTCCATTTGCTTATTTTATTTT  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCTC-TTTTTCCCTTTTAATCTCCATTTGCTTATTTTATTTT  191

seq1  ATTTTATTTTTCAAGACAGGGTTTCTCTGTGTAGCCCT-GGCTGTCCTGG  247
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTTA-TTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGGCTGTCCTGG  240

seq1  AACTCACTTTGTAGACTAGGCTGATCTCAAACTCAGAAATCCACCTGCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTTGTAGACTAGGCTGATCTCAAACTCAGAAATCCACCTGCCT  290

seq1  CTGCTTCCCAAGTGCTGGGATTAAAGGTGTGTGTCACAATGCCCGGCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCCAAGTGCTGGGATTAAAGGTGTGTGTCACAATGCCCGGCTCT  340

seq1  AAGTTATTCATTTTATTCCAAGAAAATGTATTCATCATTGACTGAAAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTCATTTTATTCCAAGAAAATGTATTCATCATTGACTGAAAATT  390

seq1  TCCCAGAATAGGATGAATTCATTGCAGAATCCAAAAGTGAAGCAATGTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAATAGGATGAATTCATTGCAGAATCCAAAAGTGAAGCAATGTAT  440

seq1  ACTGAAGTAGACATTAGTGAATACTCACTATTCTCTACTTGGTGATAAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGTAGACATTAGTGAATACTCACTATTCTCTACTTGGTGATAAAG  490

seq1  TCACCATAATTAAATAAAATGAGCACATGGTTTTGTTTTCTAAAAAATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATAATTAAATAAAATGAGCACATGGTTTTGTTTTCTAAAAAATAA  540

seq1  TCTCATTTGATTAACAAAAATAACAAAAACATACATATGAATGTTCATAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTGATTAACAAAAATAACAAAAACATACATATGAATGTTCATAC  590

seq1  ACATGCTACACAATACTTTTAGCGTATTTATTTGGTAGCAGAGGAAGGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTACACAATACTTTTAGCGTATTTATTTGGTAGCAGAGGAAGGCC  640

seq1  TTATCTGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGAATGGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGAATGGAT  690

seq1  GCCCCTGTGTAAGGGGAATGCTAGGGCAGTGAGGCAGAAGTGGGTGGGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTGTAAGGGGAATGCTAGGGCAGTGAGGCAGAAGTGGGTGGGTG  740

seq1  GGTGAGGGAGCACCCTCATAGAAGCTTGGCAAAGGGGTTGAGATAGGGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGGAGCACCCTCATAGAAGCTTGGCAAAGGGGTTGAGATAGGGGG  790

seq1  TTTGTGGAGGGGAAACCAGGAAAGGAGATAACGCTTGAAATACAAATAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGAGGGGAAACCAGGAAAGGAGATAACGCTTGAAATACAAATAAA  840

seq1  TAAAATAACCAATAAAAAATTGTTTAAGCATATTTACTTAGAACAGCCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAACCAATAAAAAATTGTTTAAGCATATTTACTTAGAACAGCCTG  890

seq1  AACACTGTTGAAGCTGCTTCCTATGGTAACTTAGGATGATATATCTACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTTGAAGCTGCTTCCTATGGTAACTTAGGATGATATATCTACAT  940

seq1  TCAGAATGAGATTTTCTAAAATTCCAGTTATAAAGCTTAAAAGTTGTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGAGATTTTCTAAAATTCCAGTTATAAAGCTTAAAAGTTGTTCT  990

seq1  TTTTGGAACTAAAGAGCTCTTTCCTAATGCAAGTGGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAACTAAAGAGCTCTTTCCTAATGCAAGTGGAATTC  1031


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