BAC Information

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BAC

Clone NameB6Ng01-193L20
Chromosome3 (Build37)
Map Location 63,637,888 - 63,638,887
singlet/doubletsinglet
Overlap genePlch1
Upstream geneLOC676984, LOC666967, Mme
Downstream geneLOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193L20.bB6Ng01-193L20.g
ACCGA016625GA016626
length1,0861,007
definitionB6Ng01-193L20.b B6Ng01-193L20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacgaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaact
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
ccagatctttcacttccttcgttagagtcacgcccgagataatttatatt
atttgtggctattgagaagggtgttggtttccctaaattcctttctcagc
cctgtttaatcttttgtgtagagaaagccattgaacttggctgaagtatt
tatatcccagcctacttcaaccgaagccgctaatca
gaattcaacccaaaatgtatctattttcactcagttttgctcctatcttt
gtaggttgtctttctggctttggaaagtggtagcaaataataaacaaaag
tcagaaaagccaagtgtggctgatatgctggacacacggtctttcccctt
ctttgtgtaggtggtctggagatgtgtttattaatagcaaatacagatgg
tcttacccctccttcgtttacattttctgccttaaagcatgttctttttc
agatatgggaagaaacagacactaggggatttggtacagcaggtgaaggg
ctagctttggaggagttgagtgatagaacttaagagcctaggctcagaac
ctgagtgcaagctgactttgctaactagcttctagccttcgagactccct
cttagcttgcctacatcttcatgatgggctgaccaaaaccttcctcatat
tccaagatgggcctacttctgcaccaaaatgagttcttgacccaaggctc
taatcaacctctctctgcctgaacccagttactaaattgaggacctttag
ttccttagctaggaattaactaggttgtaatgtgtgacctatatggttgt
aaaaaattttgattaaccagtgtttctggtacagtgtttgaagatatcct
ccatgacccactgtgggcgatatggacaaagtgtcagagggcgatattca
ctattctacaatatggcagttctccacctggcattatatttaaaagcttc
agactggcagacaaggatctggctatatggaatgttttttgagagcacac
cagacctttttattcagtaaatttcataagaaattcaattacctatgaaa
gtcaccccagggagatcactcattcaaaggtaacacaggaaagggaaaat
tgtcaattttcttttccaacaagggatttcttttggggggggcgggcttg
ttgaattttcttctgacaattgcaaaatctaaatggtacaagagatgagg
gcaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63637888_63638887
seq2: B6Ng01-193L20.g_68_1074 (reverse)

seq1  -GTTTTGCCTCATCTCTTGTA-CATTTAGATTTTTGCATTTGTCAGAAG-  47
       ||||  |||||||||||||| |||||||| ||||||| |||||||||| 
seq2  GGTTTGCCCTCATCTCTTGTACCATTTAGA-TTTTGCAATTGTCAGAAGA  49

seq1  AAATTCAAC-AGCCCCGCCCCCCCAAAAGAAATCCCTTGTTGGAAAAG-A  95
      ||||||||| |||||  ||||||||||||||||||||||||||||||| |
seq2  AAATTCAACAAGCCCGCCCCCCCCAAAAGAAATCCCTTGTTGGAAAAGAA  99

seq1  AATTGACAATTTT-CCTTTCCTGTG-TACCTTTGAATGAGTGATCTCCCT  143
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  AATTGACAATTTTCCCTTTCCTGTGTTACCTTTGAATGAGTGATCTCCCT  149

seq1  GGGGTGAC-TTCATAGGTAATTGAATTTCTTATGAAATTTACTGAATAAA  192
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGACTTTCATAGGTAATTGAATTTCTTATGAAATTTACTGAATAAA  199

seq1  AAGGTCTGGTGTGCTCTCAAAAAACATTCCATATAGCCAGATCCTTGTCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGGTGTGCTCTCAAAAAACATTCCATATAGCCAGATCCTTGTCT  249

seq1  GCCAGTCTGAAGCTTTTAAATATAATGCCAGGTGGAGAACTGCCATATTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTGAAGCTTTTAAATATAATGCCAGGTGGAGAACTGCCATATTG  299

seq1  TAGAATAGTGAATATCGCCCTCTGACACTTTGTCCATATCGCCCACAGTG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGTGAATATCGCCCTCTGACACTTTGTCCATATCGCCCACAGTG  349

seq1  GGTCATGGAGGATATCTTCAAACACTGTACCAGAAACACTGGTTAATCAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGAGGATATCTTCAAACACTGTACCAGAAACACTGGTTAATCAA  399

seq1  AATTTTTTACAACCATATAGGTCACACATTACAACCTAGTTAATTCCTAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTACAACCATATAGGTCACACATTACAACCTAGTTAATTCCTAG  449

seq1  CTAAGGAACTAAAGGTCCTCAATTTAGTAACTGGGTTCAGGCAGAGAGAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAACTAAAGGTCCTCAATTTAGTAACTGGGTTCAGGCAGAGAGAG  499

seq1  GTTGATTAGAGCCTTGGGTCAAGAACTCATTTTGGTGCAGAAGTAGGCCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTAGAGCCTTGGGTCAAGAACTCATTTTGGTGCAGAAGTAGGCCC  549

seq1  ATCTTGGAATATGAGGAAGGTTTTGGTCAGCCCATCATGAAGATGTAGGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGAATATGAGGAAGGTTTTGGTCAGCCCATCATGAAGATGTAGGC  599

seq1  AAGCTAAGAGGGAGTCTCGAAGGCTAGAAGCTAGTTAGCAAAGTCAGCTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAGAGGGAGTCTCGAAGGCTAGAAGCTAGTTAGCAAAGTCAGCTT  649

seq1  GCACTCAGGTTCTGAGCCTAGGCTCTTAAGTTCTATCACTCAACTCCTCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGGTTCTGAGCCTAGGCTCTTAAGTTCTATCACTCAACTCCTCC  699

seq1  AAAGCTAGCCCTTCACCTGCTGTACCAAATCCCCTAGTGTCTGTTTCTTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGCCCTTCACCTGCTGTACCAAATCCCCTAGTGTCTGTTTCTTC  749

seq1  CCATATCTGAAAAAGAACATGCTTTAAGGCAGAAAATGTAAACGAAGGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCTGAAAAAGAACATGCTTTAAGGCAGAAAATGTAAACGAAGGAG  799

seq1  GGGTAAGACCATCTGTATTTGCTATTAATAAACACATCTCCAGACCACCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGACCATCTGTATTTGCTATTAATAAACACATCTCCAGACCACCT  849

seq1  ACACAAAGAAGGGGAAAGACCGTGTGTCCAGCATATCAGCCACACTTGGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGAAGGGGAAAGACCGTGTGTCCAGCATATCAGCCACACTTGGC  899

seq1  TTTTCTGACTTTTGTTTATTATTTGCTACCACTTTCCAAAGCCAGAAAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGACTTTTGTTTATTATTTGCTACCACTTTCCAAAGCCAGAAAGA  949

seq1  CAACCTACAAAGATAGGAGCAAAACTGAGTGAAAATAGATACATTTTGGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTACAAAGATAGGAGCAAAACTGAGTGAAAATAGATACATTTTGGG  999

seq1  TTGAATTC  1000
      ||||||||
seq2  TTGAATTC  1007