BAC Information

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BAC

Clone NameB6Ng01-193O10
Chromosome3 (Build37)
Map Location 31,694,484 - 31,802,538
singlet/doubletdoublet
Overlap geneKcnmb2
Upstream geneTloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil, Cldn11, Slc7a14, LOC625125
Downstream geneLOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193O10.bB6Ng01-193O10.g
ACCGA016740GA016741
length1,031987
definitionB6Ng01-193O10.b B6Ng01-193O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,694,484 - 31,695,532)(31,801,558 - 31,802,538)
sequence
gaattcataaaaaaaaccaaacaaacaaaaaaaaaaaaacatggaaagtt
ttcatctcatgtacagcgtggatctaccccattatgcatcatacatgctt
tattagttactttctcacttctgcaataaaacactctggcaaaaatcaaa
taaaggggcaaagagtttgttacttatacttacagttccagaatgatacc
agtcatcatgggagtgaagagaaggcaagatgtacggaaggcatggtagc
aggaacagaagacttaacggtcacagtcacagtgcatccacactaagtaa
gcagaaagctagtggagctggaaccaggctgtaagctatcaagacccacc
ccagccactcgccgattctaccgaagaatctacccccgaaagatccgaca
gcctttactagcataactactgggtggaagagggcaacgcaagagttcaa
atacccaagcccatggagaacacttcacattcaaaccataatacattgag
ccttggttacttctgtgacctctatcagaacactctgtctgaaatgtctc
ttattagcatcttaaatctccatacacgcatccatctctagaggacatgg
aaacttcccaagtgccgggaaagactacagtttcagactggctcattaat
atccttggttcatcattaaggatgcagactcgggcaaattaagatgctta
tgtataaaaatacttccttaactgtccccttgacactgactgtggaagca
ctgattcctgggttcaggattatcatcaatatcaaaaggcacttggacct
cgtgaaattgcttctctcaagtgtagcaccctgcctgtgtttctctcctg
aactataataactctgtctacatccagaatttcagatgtttctgtgtctt
gttcagctgagcatccatgctaggagtaggattactagggaactacgttt
aagatctggggattgtgcaggatcagcagcagcagtggccttgagttacc
accacccacagaatgtgtgcagtgataaggt
gaattcccgtttccatctgcagcccagcagttgctcaaaggcaagaacac
gaacagagagaaagccccttctttactctcaaactcccggtctgttttta
gcaaagccattaataggaacagaatggtgtggaccagcctttcaatatgc
aagatggacagaggtaaccagatttctcttatagtagattatagggggaa
atccatcactatcttctgaaataccctctgaccaccaaaacacactgact
ccaggaatatatatttacctaacaggtttcaagttcagcacggcttcctc
ctctatttttcttggctctctctgcctcccacctgccaaagtcttctctc
agtgccccctccccagcctatcaggcaccactggtaagaaaagaactgtt
ttctccatgacctctaagccttctactccaccgaaagcaacgtggagtgc
acactcagcaggctgcgatcgagcccggagccaacctgtccatgaggctt
tccagacataaaacctcacactgcccagtgtgtcttgtgttttggtcagc
gtggagccccaagtcaaccaagcctctctgtagcacctggctgcaatccc
tgaccgaccacaggcaccccagcgctgagcccagcgacaacaaaaagctc
caaacagcaacagattcctttgttttacatgcaaatcctaccttcaggag
ttgtcacatcttcctcaaaagccacgcttaatttttaatgacagtgatcc
cgtgtagtcctccacacagccaccgggtcctcatctttacctttcctgct
gggctgtcttggtggaccattgatgtcacaccctcgcttactcatagctt
acttccccgttcaaaatgtcttgcaagatttgggaaggacaataggagtg
acaggcacgctagacagcaatgcttaagaattagttctccgaaactcctg
tggaagccggtcccagactggtttttaaagcgtgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_31694484_31695532
seq2: B6Ng01-193O10.b_43_1073

seq1  GAATTCATAAAAAAAACCAAACAAACAAAAAAAAAAAAACATGGAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAAAAAACCAAACAAACAAAAAAAAAAAAACATGGAAAGTT  50

seq1  TTCATCTCATGTACAGCGTGGATCTACCCCATTATGCATCATACATGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCATGTACAGCGTGGATCTACCCCATTATGCATCATACATGCTT  100

seq1  TATTAGTTACTTTCTCACTTCTGCAATAAAACACTCTGGCAAAAATCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTACTTTCTCACTTCTGCAATAAAACACTCTGGCAAAAATCAAA  150

seq1  TAAAGGGGCAAAGAGTTTGTTACTTATACTTACAGTTCCAGAATGATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGCAAAGAGTTTGTTACTTATACTTACAGTTCCAGAATGATACC  200

seq1  AGTCATCATGGGAGTGAAGAGAAGGCAAGATGTACGGAAGGCATGGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCATGGGAGTGAAGAGAAGGCAAGATGTACGGAAGGCATGGTAGC  250

seq1  AGGAACAGAAGACTTAACGGTCACAGTCACAGTGCATCCACACTAAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGAAGACTTAACGGTCACAGTCACAGTGCATCCACACTAAGTAA  300

seq1  GCAGAAAGCTAGTGGAGCTGGAACCAGGCTGTAAGCTATCAAGACCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGCTAGTGGAGCTGGAACCAGGCTGTAAGCTATCAAGACCCACC  350

seq1  CCAGCCACTCGCCGATTCTACCGAAGAATCTACCCCCGAAAGATCCGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACTCGCCGATTCTACCGAAGAATCTACCCCCGAAAGATCCGACA  400

seq1  GCCTTTACTAGCATAACTACTGGGTGGAAGAGGGCAACGCAAGAGTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACTAGCATAACTACTGGGTGGAAGAGGGCAACGCAAGAGTTCAA  450

seq1  ATACCCAAGCCCATGGAGAACACTTCACATTCAAACCATAATACATTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAAGCCCATGGAGAACACTTCACATTCAAACCATAATACATTGAG  500

seq1  CCTTGGTTACTTCTGTGACCTCTATCAGAACACTCTGTCTGAAATGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTACTTCTGTGACCTCTATCAGAACACTCTGTCTGAAATGTCTC  550

seq1  TTATTAGCATCTTAAATCTCCATACACGCATCCATCTCTAGAGGACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCATCTTAAATCTCCATACACGCATCCATCTCTAGAGGACATGG  600

seq1  AAACTTCCCAAGTGCCGGGAAAGACTACAGTTTCAGACTGGCTCATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCCAAGTGCCGGGAAAGACTACAGTTTCAGACTGGCTCATTAAT  650

seq1  ATCCTTGGTTCATCATTAAGGATGCAGACTCGGGCAAATTAAGATGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGTTCATCATTAAGGATGCAGACTCGGGCAAATTAAGATGCTTA  700

seq1  TGTATAAAAATACTTCCTTAACTGTCCCCTTGACACTGACTGTGGAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAAATACTTCCTTAACTGTCCCCTTGACACTGACTGTGGAAGCA  750

seq1  CTGATTCCTGGGTTCAGGATTATCATCAATATCAAAAGGCACTTGGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCTGGGTTCAGGATTATCATCAATATCAAAAGGCACTTGGACCT  800

seq1  CGTGAAATTGCTTCTCTCAAGTGTTAGCACCCTGCCTGTGGTTTCTCTCC  850
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CGTGAAATTGCTTCTCTCAAGTG-TAGCACCCTGCCTGT-GTTTCTCTCC  848

seq1  TGAACTATAATAACTCTGTTCTACAATCCAGAAATTCAGATGTTTCTGTG  900
      |||||||||||||||||| ||||| |||||||| ||||||||||||||||
seq2  TGAACTATAATAACTCTG-TCTAC-ATCCAGAATTTCAGATGTTTCTGTG  896

seq1  TCTTGTTCAGGCTGAAGCATCCATGCCTAGAGTTAGGATTTACTAGGAAA  950
      ||||||||| |||| |||||||||| ||||   ||||| |||||||| ||
seq2  TCTTGTTCA-GCTG-AGCATCCATG-CTAGGAGTAGGA-TTACTAGGGAA  942

seq1  CTACGTTAAGGATCCTGGGGAATTGTTGCAAGGATCAGCAGCAGCAGTGG  1000
      ||||||| | ||| |||||| |||| ||| ||||||||||||||||||||
seq2  CTACGTTTAAGAT-CTGGGG-ATTG-TGC-AGGATCAGCAGCAGCAGTGG  988

seq1  CTTGAAGTTAACCACCACCACAGAGAAATGTGTGCATGTTGGATAAGGT  1049
      | |  |||| ||||||||| || || |||||||||| ||  ||||||||
seq2  CCTTGAGTT-ACCACCACC-CACAG-AATGTGTGCA-GT--GATAAGGT  1031

seq1: chr3_31801558_31802538
seq2: B6Ng01-193O10.g_69_1055 (reverse)

seq1  CTGCACGCTTTTAAAAACAGTCT-GGACCGGCTTCCACA-GAGCTTCGGA  48
      ||||||||||| |||| |||||| ||||||||||||||| ||| ||||||
seq2  CTGCACGCTTTAAAAACCAGTCTGGGACCGGCTTCCACAGGAGTTTCGGA  50

seq1  GAACTAA-TCTTAAGCATGGCTGTCTAGCGTGCCTGTCACTCCTATTGTC  97
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  GAACTAATTCTTAAGCATTGCTGTCTAGCGTGCCTGTCACTCCTATTGTC  100

seq1  CTTCCAAACTCTTGC-AGACATTTTGAGCGAGGAGTAAAGCTATGAGTTA  146
      ||||| || |||||| ||||||||||| || |||   ||||||||||| |
seq2  CTTCCCAAATCTTGCAAGACATTTTGAACGGGGAAGTAAGCTATGAGTAA  150

seq1  GCGAGGGTGTGACATCAATGGTCCACAAAGACAG-CCAGCAGGAAAGGTA  195
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  GCGAGGGTGTGACATCAATGGTCCACCAAGACAGCCCAGCAGGAAAGGTA  200

seq1  AAGATGAGGA-CCGGTGGCTGTGTGGAGGACTACACGGGATCACTGTCAT  244
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGGACCCGGTGGCTGTGTGGAGGACTACACGGGATCACTGTCAT  250

seq1  TAAAAATTAAGCGTGGCTTTTGAGGAAGATGTGACAACTCCTGAAGGTAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTAAGCGTGGCTTTTGAGGAAGATGTGACAACTCCTGAAGGTAG  300

seq1  GATTTGCATGTAAAACAAAGGAATCTGTTGCTGTTTGGAGCTTTTTGTTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCATGTAAAACAAAGGAATCTGTTGCTGTTTGGAGCTTTTTGTTG  350

seq1  TCGCTGGGCTCAGCGCTGGGGTGCCTGTGGTCGGTCAGGGATTGCAGCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGGGCTCAGCGCTGGGGTGCCTGTGGTCGGTCAGGGATTGCAGCCA  400

seq1  GGTGCTACAGAGAGGCTTGGTTGACTTGGGGCTCCACGCTGACCAAAACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTACAGAGAGGCTTGGTTGACTTGGGGCTCCACGCTGACCAAAACA  450

seq1  CAAGACACACTGGGCAGTGTGAGGTTTTATGTCTGGAAAGCCTCATGGAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACACACTGGGCAGTGTGAGGTTTTATGTCTGGAAAGCCTCATGGAC  500

seq1  AGGTTGGCTCCGGGCTCGATCGCAGCCTGCTGAGTGTGCACTCCACGTTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGCTCCGGGCTCGATCGCAGCCTGCTGAGTGTGCACTCCACGTTG  550

seq1  CTTTCGGTGGAGTAGAAGGCTTAGAGGTCATGGAGAAAACAGTTCTTTTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGGTGGAGTAGAAGGCTTAGAGGTCATGGAGAAAACAGTTCTTTTC  600

seq1  TTACCAGTGGTGCCTGATAGGCTGGGGAGGGGGCACTGAGAGAAGACTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGTGGTGCCTGATAGGCTGGGGAGGGGGCACTGAGAGAAGACTTT  650

seq1  GGCAGGTGGGAGGCAGAGAGAGCCAAGAAAAATAGAGGAGGAAGCCGTGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGGGAGGCAGAGAGAGCCAAGAAAAATAGAGGAGGAAGCCGTGC  700

seq1  TGAACTTGAAACCTGTTAGGTAAATATATATTCCTGGAGTCAGTGTGTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGAAACCTGTTAGGTAAATATATATTCCTGGAGTCAGTGTGTTT  750

seq1  TGGTGGTCAGAGGGTATTTCAGAAGATAGTGATGGATTTCCCCCTATAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCAGAGGGTATTTCAGAAGATAGTGATGGATTTCCCCCTATAAT  800

seq1  CTACTATAAGAGAAATCTGGTTACCTCTGTCCATCTTGCATATTGAAAGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATAAGAGAAATCTGGTTACCTCTGTCCATCTTGCATATTGAAAGG  850

seq1  CTGGTCCACACCATTCTGTTCCTATTAATGGCTTTGCTAAAAACAGACCG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCACACCATTCTGTTCCTATTAATGGCTTTGCTAAAAACAGACCG  900

seq1  GGAGTTTGAGAGTAAAGAAGGGGCTTTCTCTCTGTTCGTGTTCTTGCCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGAGAGTAAAGAAGGGGCTTTCTCTCTGTTCGTGTTCTTGCCTT  950

seq1  TGAGCAACTGCTGGGCTGCAGATGGAAACGGGAATTC  981
      |||||||||||||||||||||||||||||||||||||
seq2  TGAGCAACTGCTGGGCTGCAGATGGAAACGGGAATTC  987