BAC Information

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BAC

Clone NameB6Ng01-194B12
Chromosome3 (Build37)
Map Location 150,936,600 - 151,022,336
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194B12.bB6Ng01-194B12.g
ACCGA016883GA016884
length1,1891,094
definitionB6Ng01-194B12.b B6Ng01-194B12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,936,600 - 150,937,810)(151,021,297 - 151,022,336)
sequence
gaattcttttctaggcacatacaagttacttcctaagcacagaacatgtt
tcccatattttaagttagcaggtcaatcagcgaaacactgagccagaaaa
aagaaacgcatcctctacctattagagcataaagcaaacattgtaagatc
cactaaacgtccttacactaaatctagttgctattgttcattgatgttac
tattctgacacttaacatggggctgatatttctgttcaaaaagtagcagc
ctggtaatctggtagattttatatatattatatattttatatatctctct
ccacacctagcccagggtgcctattcagtgtgctgagttagtagtggatg
actgataaattcgaccctgagatttgataaaattccctatttgattccct
atttgcatgtttgtcttttgtccaaacttcaggaagtaactcaagttcac
ctcaaagttacctcctccacagaaagtgtttctcatttccacaaagcaac
gataacataccaaaatgcctctaaacactaatctcttaaccaagaaaatg
catttttgaattcaaaactctagatctatttttttctgagtattgtattt
tgattattttgaaattggactttaaatcattttaatgtaaaaaattattt
taatgagagctagcaaatcaatcaagggtaaggacaaattgttctttgta
tttagttgaagacagtattttcctgttattttattataatttaaaatttt
caaacattgtaatttcatcactgtaagatagatgtttttataccttcaat
tttcacttacagttgtttaatgaacaaaacgctcatttaaagtcaaattt
attatctaatagaggaatgtaattaacagtcatgaacaaaagcttatatg
cctgtcaatctagagtaaactgtagaaagaatttcacacttatctctggg
caaaaattaagtatttaagatacagctaaaatcatattggtttagaaagt
ggtaaattggttctcctggaggcctatacctctcaccatgggtagttggc
tcagttacagtatagcacattctcctcctgctagtgggcttaatagtttc
agcagatgtaactattatagagttcgcactactggttcaactgagagaaa
aggttcctgtagtgcacttcattaatcatacatctaaga
gaattcagttagagattttaatggtttagggaaatgacaatagtagaatc
tcctttagagccagtggtttcaacaactgatagttggctaaatttaaatg
gccaggtatgaattctccctactgaccaggacttccgtccagttaagtgg
caattaggtatgcccaggatagaagtactactcttgcactactaagaatg
tcttgccatgatggtcattgtgttttttcggcattatagctgggtaagac
tattgactctctcctctgttaatagtctgcatggctcctgtatgagaact
ggtcctcagtaaggaggcttccaggtcagattcagatcaatttcttcaca
tgctatgcccagagtgtgtggtgttgtcagcaagagggtcttagcttttg
ttctggaaggtgccaaggacaatggaaataggctattttgttttggagat
ttcttggactgatcaacaacttgaaatgagatttcctgtgtctggccctg
gggattttctgagacagtctatggatttcggatgaggccctgtcatctca
attggaataatgtctaagaaaaattttaataattacttaatataagttaa
gtaatttactttccttggttcttacagatccatatggcctagacataatg
acctgacaatggaagtgagatctgtgctaccactcaaaataagggcaatt
aaatgaggtcagcatttggtttatggaaaataattaccagcctcagtctt
ttcaaataatattgcctcgagacaagaaaattaatctatatgattctgtg
acatgggtatgtctagacatttagactgtcacacgaggaaattaactttt
tcttaaaagccaataaatgaattgctggtaattccaacaagattaataat
taggtatgaaaaagcagttagcattttaggagcacacgtatcactgttat
ttgaacgcattgcctttaactggggtttatggaaatagcctcctttcaat
tttctctgtaagagtaacatgctcacaactctacatatttcacagaacat
cacaagaaacattctgacagcaagaataaacatgttaaataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150936600_150937810
seq2: B6Ng01-194B12.b_44_1232

seq1  GAATTCTTTTCTAGGCACATACAAGTTACTTCCTAAGCACAGAACATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTAGGCACATACAAGTTACTTCCTAAGCACAGAACATGTT  50

seq1  TCCCATATTTTAAGTTAGCAGGTCAATCAGCGAAACACTGAGCCAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATATTTTAAGTTAGCAGGTCAATCAGCGAAACACTGAGCCAGAAAA  100

seq1  AAGAAACGCATCCTCTACCTATTAGAGCATAAAGCAAACATTGTAAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACGCATCCTCTACCTATTAGAGCATAAAGCAAACATTGTAAGATC  150

seq1  CACTAAACGTCCTTACACTAAATCTAGTTGCTATTGTTCATTGATGTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAACGTCCTTACACTAAATCTAGTTGCTATTGTTCATTGATGTTAC  200

seq1  TATTCTGACACTTAACATGGGGCTGATATTTCTGTTCAAAAAGTAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGACACTTAACATGGGGCTGATATTTCTGTTCAAAAAGTAGCAGC  250

seq1  CTGGTAATCTGGTAGATTTTATATATATTATATATTTTATATATCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATCTGGTAGATTTTATATATATTATATATTTTATATATCTCTCT  300

seq1  CCACACCTAGCCCAGGGTGCCTATTCAGTGTGCTGAGTTAGTAGTGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCTAGCCCAGGGTGCCTATTCAGTGTGCTGAGTTAGTAGTGGATG  350

seq1  ACTGATAAATTCGACCCTGAGATTTGATAAAATTCCCTATTTGATTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAAATTCGACCCTGAGATTTGATAAAATTCCCTATTTGATTCCCT  400

seq1  ATTTGCATGTTTGTCTTTTGTCCAAACTTCAGGAAGTAACTCAAGTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATGTTTGTCTTTTGTCCAAACTTCAGGAAGTAACTCAAGTTCAC  450

seq1  CTCAAAGTTACCTCCTCCACAGAAAGTGTTTCTCATTTCCACAAAGCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTTACCTCCTCCACAGAAAGTGTTTCTCATTTCCACAAAGCAAC  500

seq1  GATAACATACCAAAATGCCTCTAAACACTAATCTCTTAACCAAGAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATACCAAAATGCCTCTAAACACTAATCTCTTAACCAAGAAAATG  550

seq1  CATTTTTGAATTCAAAACTCTAGATCTATTTTTTTCTGAGTATTGTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGAATTCAAAACTCTAGATCTATTTTTTTCTGAGTATTGTATTT  600

seq1  TGATTATTTTGAAATTGGACTTTAAATCATTTTAATGTAAAAAATTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTTTGAAATTGGACTTTAAATCATTTTAATGTAAAAAATTATTT  650

seq1  TAATGAGAGCTAGCAAATCAATCAAGGGTAAGGACAAATTGTTCTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAGCTAGCAAATCAATCAAGGGTAAGGACAAATTGTTCTTTGTA  700

seq1  TTTAGTTGAAGACAGTATTTTCCTGTTATTTTATTATAATTTAAAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGAAGACAGTATTTTCCTGTTATTTTATTATAATTTAAAATTTT  750

seq1  CAAACATTGTAATTTCATCACTGTAAGATAGATGTTTTTATACCTTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTGTAATTTCATCACTGTAAGATAGATGTTTTTATACCTTCAAT  800

seq1  TTTCACTTACAGTTGTTTAATGAACAAAACGCTCATTTAAAGTCAAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTACAGTTGTTTAATGAACAAAACGCTCATTTAAAGTCAAATTT  850

seq1  ATTATCTAATAGAGGAATGTAATTAACAGTCATGAACAAAAGCTTATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTAATAGAGGAATGTAATTAACAGTCATGAACAAAAGCTTATATG  900

seq1  CCTGTCAATCTAGAGTAAACTGTAGAAAGAATTTCACACTTATCTCTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAATCTAGAGTAAACTGTAGAAAGAATTTCACACTTATCTCTGGG  950

seq1  CAAAAATTAAGTATTTAAGATACAGCTAAAAATCATATTGGTTTAGGAAA  1000
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  CAAAAATTAAGTATTTAAGATACAGCT-AAAATCATATTGGTTTA-GAAA  998

seq1  GTGGTAAAATTGGGTTCTCCTGGAAGGCCTATAACCTCTCCAACCATGGG  1050
      ||||||||  | ||||||||||| |||||||| |||||||  ||||||||
seq2  GTGGTAAA--TTGGTTCTCCTGG-AGGCCTAT-ACCTCTC--ACCATGGG  1042

seq1  TAGTTGGCTCAGTTTACAGTAATAGGCAACAATTCT-CTCCTGCTAAGTG  1099
      |||||||||||| ||||||| ||| |||   ||||| |||||||| ||||
seq2  TAGTTGGCTCAG-TTACAGT-ATA-GCA--CATTCTCCTCCTGCT-AGTG  1086

seq1  GGCCTTAAATAGTTTTTCAGCAGATGGAAACTATTATAGAG-TCGCACTA  1148
      |||  | |||||  ||||||||||| | ||||||||||||| ||||||||
seq2  GGC--TTAATAG--TTTCAGCAGAT-GTAACTATTATAGAGTTCGCACTA  1131

seq1  CTGGTCAAACTGAGAGAAAAAGTTCCTGTTAGTGCAACTACAATATAATC  1198
      |||||  ||||||||||||| ||||||| |||||| ||| ||   |||||
seq2  CTGGTTCAACTGAGAGAAAAGGTTCCTG-TAGTGC-ACTTCA--TTAATC  1177

seq1  ATTACATCTAAGA  1211
      | |||||||||||
seq2  A-TACATCTAAGA  1189

seq1: chr3_151021297_151022336
seq2: B6Ng01-194B12.g_117_1156 (reverse)

seq1  ATTTAATTTACATGTTTA-TCTTGCTGTTCAGAATGTTTCTTTGTGATTG  49
      ||||| || ||||||||| |||||||| |||||||||||| |||||||  
seq2  ATTTATTTAACATGTTTATTCTTGCTG-TCAGAATGTTTC-TTGTGATGT  48

seq1  TCTGTGAATATTGTAGAGGTGTGAGCATGTTACTCTTACAGAGAAAATTG  99
      ||||||||   ||||||| |||||||||||||||||||||||||||||||
seq2  TCTGTGAAATATGTAGAGTTGTGAGCATGTTACTCTTACAGAGAAAATTG  98

seq1  -AAGGAGGCTATTTCCATAAA-CCCAGTTAAAGGCAATGCGTTCAAATAA  147
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGGAGGCTATTTCCATAAACCCCAGTTAAAGGCAATGCGTTCAAATAA  148

seq1  CAGTGATACGTGTGCTCCTAAAATGCTAACTGCTTTTTCATACCTAATTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATACGTGTGCTCCTAAAATGCTAACTGCTTTTTCATACCTAATTA  198

seq1  TTAATCTTTGTTGGAATTACCAGCAATTCATTTATTGGCTTTTAAGAAAA  247
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATC-TTGTTGGAATTACCAGCAATTCATTTATTGGCTTTTAAGAAAA  247

seq1  AGTTAATTTCCTCGTGTGACAGTCTAAATGTCTAGACATACCCATGTCAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTCCTCGTGTGACAGTCTAAATGTCTAGACATACCCATGTCAC  297

seq1  AGAATCATATAGATTAATTTTCTTGTCTCGAGGCAATATTATTTGAAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATATAGATTAATTTTCTTGTCTCGAGGCAATATTATTTGAAAAG  347

seq1  ACTGAGGCTGGTAATTATTTTCCATAAACCAAATGCTGACCTCATTTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTGGTAATTATTTTCCATAAACCAAATGCTGACCTCATTTAAT  397

seq1  TGCCCTTATTTTGAGTGGTAGCACAGATCTCACTTCCATTGTCAGGTCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTATTTTGAGTGGTAGCACAGATCTCACTTCCATTGTCAGGTCAT  447

seq1  TATGTCTAGGCCATATGGATCTGTAAGAACCAAGGAAAGTAAATTACTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTAGGCCATATGGATCTGTAAGAACCAAGGAAAGTAAATTACTTA  497

seq1  ACTTATATTAAGTAATTATTAAAATTTTTCTTAGACATTATTCCAATTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATTAAGTAATTATTAAAATTTTTCTTAGACATTATTCCAATTGA  547

seq1  GATGACAGGGCCTCATCCGAAATCCATAGACTGTCTCAGAAAATCCCCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAGGGCCTCATCCGAAATCCATAGACTGTCTCAGAAAATCCCCAG  597

seq1  GGCCAGACACAGGAAATCTCATTTCAAGTTGTTGATCAGTCCAAGAAATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGACACAGGAAATCTCATTTCAAGTTGTTGATCAGTCCAAGAAATC  647

seq1  TCCAAAACAAAATAGCCTATTTCCATTGTCCTTGGCACCTTCCAGAACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAAAATAGCCTATTTCCATTGTCCTTGGCACCTTCCAGAACAA  697

seq1  AAGCTAAGACCCTCTTGCTGACAACACCACACACTCTGGGCATAGCATGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAGACCCTCTTGCTGACAACACCACACACTCTGGGCATAGCATGT  747

seq1  GAAGAAATTGATCTGAATCTGACCTGGAAGCCTCCTTACTGAGGACCAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATTGATCTGAATCTGACCTGGAAGCCTCCTTACTGAGGACCAGT  797

seq1  TCTCATACAGGAGCCATGCAGACTATTAACAGAGGAGAGAGTCAATAGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACAGGAGCCATGCAGACTATTAACAGAGGAGAGAGTCAATAGTC  847

seq1  TTACCCAGCTATAATGCCGAAAAAACACAATGACCATCATGGCAAGACAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAGCTATAATGCCGAAAAAACACAATGACCATCATGGCAAGACAT  897

seq1  TCTTAGTAGTGCAAGAGTAGTACTTCTATCCTGGGCATACCTAATTGCCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTAGTGCAAGAGTAGTACTTCTATCCTGGGCATACCTAATTGCCA  947

seq1  CTTAACTGGACGGAAGTCCTGGTCAGTAGGGAGAATTCATACCTGGCCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTGGACGGAAGTCCTGGTCAGTAGGGAGAATTCATACCTGGCCAT  997

seq1  TTAAATTTAGCCAACTATCAGTTGTTGAAACCACTGGCTCTAA  1040
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTAGCCAACTATCAGTTGTTGAAACCACTGGCTCTAA  1040