BAC Information

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BAC

Clone NameB6Ng01-194F02
Chromosome3 (Build37)
Map Location 124,707,196 - 124,708,300
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
Downstream geneLOC668820, Ndst4, Ugt8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194F02.bB6Ng01-194F02.g
ACCGA017047GA017048
length1,1031,004
definitionB6Ng01-194F02.b B6Ng01-194F02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataacaatggagactctgaaatgtcatttcattattaacattc
atgggaagaatcaaagggagaaatcaaatattaacctacccctgcaacaa
ttaaaggaaaaaagttttcttcaagtatctagctaggagaatgttaggtt
actcgagtatcgcttcaattttctccattgaaattatgctaatttcctat
catactttttaaatgctcaaaaaatcacacatgtgcaataagatttcaaa
gggaaatatggcactcactccaaatatatttcacaatggttttgaaaact
aagagttaataaagtttcttttgtaaaacaagaatggtacagaggtcaag
gctgagaaaaatagagcattttgctttcatctgtgaaagaatgtctatgg
gttaagggcgaaaatattctgccattattttagtagatttctggtgttat
tctaatacaaacactgatgttcttgtcacctgtgtggaatttcacattag
ttgtagaagtggctaagttatgcatgagataaatgcaaaaagatgtactt
ccacatgtgtttctcagtatatgacctatgtggctatttgtgtgaatctg
tcacatagagatgaggatgctttttataaactaaactcagtagtaaagtt
tgggaaactgtatattctgtatattgattacagaatggcagttagttcag
attttagtagagaccctgcctcaagaattaaggaagagaaagattaatgt
agataccttatattcattcttgccatcctcattccacattataaaatcta
tatggggttgaaaattgatttggtatttttccaaatagaagaccaattga
tcttctaacctttgagtgttgtttttttttttatgaatgtttctcattac
cttaagccagatctttattgagtttaatcttttattgagcctttatattt
ttctttaaattccattcccttagatgttgctaaaccaaaatgataaggaa
atacagacaccatttgggattgagtgaaatatcttatgacatcatttagt
ttaaggacgactttaaagatatatgaccatgcttgtggtcttacagaatt
caa

gaattccagagtggttgtacaagcttgcaatcccaccaaccattgaggag
tgttcctctttctccacatcctcgccagcatctgctttcacctgaatttt
tgatcttagccattctgactggtgtgagatggaatctcagtgttgttttg
atttgcatttctctgatgattaaggatgttgaaaattttttcatgtgttt
ctctgcctttcggtattcctcgggtgagaattctttgttcagctctgagc
cccatcttttaagggggctatttgattttctggagtccaccatcttaagt
tctttatatatatatatatattgaatattagtcccctatctgatttaaga
taggtacaaatccttgcccaatctgttggtggtctttttgacttattgaa
ggtgtcttttgccttgcagaagctttgcagtttcatgaggtcccatttgt
caatcctcgatcttaaagcacaagccattgctgttctattcaggaatttt
tcccctgtgcccatatcttcaagacttttccccactttctcctctataag
tttcagtgtctctggttttatatggagttccttgatacacttagatttga
ccttagtacaaggagagaggaatgggtcaattcgaattcttctacatgat
aacaaccagttgtgccagcaccatttgttaaaaatgctgtcttttttttc
cagtggatggttttagctcccttgtggaagatcaagtgaccataggtgtg
tgggttcatttctgggtcttcaattctattccattggtctacttgtctgt
cactataccaagtaccatgtagtttttatcacatttgctctgtagtaaag
cttaaaggtcaagcatggtgattcaaccagaggttcttttatccttgaga
agagatttgctatcctaggtttttgtttatccagatgaaattgcagattg
cctctttctaattcgttgaagaattgagttggaattttgatgggaattgc
attg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124707196_124708300
seq2: B6Ng01-194F02.b_44_1146 (reverse)

seq1  TTGAATTTCTTGTAAGACCACAAACATGTGTCCTTATATTCTTTTTAACT  50
      |||||||   ||||||||||||| |||| |||   ||||   ||| || |
seq2  TTGAATT--CTGTAAGACCACAAGCATG-GTC---ATATATCTTTAAAGT  44

seq1  CTTCCTTAAAATTAATGATGTCATAAGATATATCCACTCTAT-CCAAAT-  98
      | |||||||| | |||||||||||||||||| | ||||| || |||||| 
seq2  CGTCCTTAAACTAAATGATGTCATAAGATAT-TTCACTCAATCCCAAATG  93

seq1  GTGTCTGTATTTCCTTATCATTTT-GTTTAGCAACATCTTAAGGAATGGA  147
      |||||||||||||||||||||||| |||||||||||||| | ||||||||
seq2  GTGTCTGTATTTCCTTATCATTTTGGTTTAGCAACATCTAAGGGAATGGA  143

seq1  ATTTAAAAGAAAAATATAAAGGCTCAAT-AAAGA-TAAACTCAATAAAGA  195
      |||| ||||||||||||||||||||||| ||||| |||||||||||||||
seq2  ATTT-AAAGAAAAATATAAAGGCTCAATAAAAGATTAAACTCAATAAAGA  192

seq1  TCTGGCTTAAGGTAATGAGAAACATTCAT-AAAAAAAAAACAACACTCAA  244
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTGGCTTAAGGTAATGAGAAACATTCATAAAAAAAAAAACAACACTCAA  242

seq1  AGGTTAGAAGATCAATTGGTCTTCTATTTGGAAAAATACCAAATCAATTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGAAGATCAATTGGTCTTCTATTTGGAAAAATACCAAATCAATTT  292

seq1  TCAACCCCATATAGATTTTATAATGTGGAATGAGGATGGCAAGAATGAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCCATATAGATTTTATAATGTGGAATGAGGATGGCAAGAATGAAT  342

seq1  ATAAGGTATCTACATTAATCTTTCTCTTCCTTAATTCTTGAGGCAGGGTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTATCTACATTAATCTTTCTCTTCCTTAATTCTTGAGGCAGGGTC  392

seq1  TCTACTAAAATCTGAACTAACTGCCATTCTGTAATCAATATACAGAATAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAAAATCTGAACTAACTGCCATTCTGTAATCAATATACAGAATAT  442

seq1  ACAGTTTCCCAAACTTTACTACTGAGTTTAGTTTATAAAAAGCATCCTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCCCAAACTTTACTACTGAGTTTAGTTTATAAAAAGCATCCTCA  492

seq1  TCTCTATGTGACAGATTCACACAAATAGCCACATAGGTCATATACTGAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGTGACAGATTCACACAAATAGCCACATAGGTCATATACTGAGA  542

seq1  AACACATGTGGAAGTACATCTTTTTGCATTTATCTCATGCATAACTTAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGTGGAAGTACATCTTTTTGCATTTATCTCATGCATAACTTAGC  592

seq1  CACTTCTACAACTAATGTGAAATTCCACACAGGTGACAAGAACATCAGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTACAACTAATGTGAAATTCCACACAGGTGACAAGAACATCAGTG  642

seq1  TTTGTATTAGAATAACACCAGAAATCTACTAAAATAATGGCAGAATATTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTAGAATAACACCAGAAATCTACTAAAATAATGGCAGAATATTT  692

seq1  TCGCCCTTAACCCATAGACATTCTTTCACAGATGAAAGCAAAATGCTCTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTTAACCCATAGACATTCTTTCACAGATGAAAGCAAAATGCTCTA  742

seq1  TTTTTCTCAGCCTTGACCTCTGTACCATTCTTGTTTTACAAAAGAAACTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAGCCTTGACCTCTGTACCATTCTTGTTTTACAAAAGAAACTT  792

seq1  TATTAACTCTTAGTTTTCAAAACCATTGTGAAATATATTTGGAGTGAGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTCTTAGTTTTCAAAACCATTGTGAAATATATTTGGAGTGAGTG  842

seq1  CCATATTTCCCTTTGAAATCTTATTGCACATGTGTGATTTTTTGAGCATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTCCCTTTGAAATCTTATTGCACATGTGTGATTTTTTGAGCATT  892

seq1  TAAAAAGTATGATAGGAAATTAGCATAATTTCAATGGAGAAAATTGAAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTATGATAGGAAATTAGCATAATTTCAATGGAGAAAATTGAAGC  942

seq1  GATACTCGAGTAACCTAACATTCTCCTAGCTAGATACTTGAAGAAAACTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCGAGTAACCTAACATTCTCCTAGCTAGATACTTGAAGAAAACTT  992

seq1  TTTTCCTTTAATTGTTGCAGGGGTAGGTTAATATTTGATTTCTCCCTTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTAATTGTTGCAGGGGTAGGTTAATATTTGATTTCTCCCTTTG  1042

seq1  ATTCTTCCCATGAATGTTAATAATGAAATGACATTTCAGAGTCTCCATTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCCCATGAATGTTAATAATGAAATGACATTTCAGAGTCTCCATTG  1092

seq1  TTATTGAATTC  1105
      |||||||||||
seq2  TTATTGAATTC  1103


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