BAC Information

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BAC

Clone NameB6Ng01-195D11
Chromosome3 (Build37)
Map Location 69,283,445 - 69,284,540
singlet/doubletsinglet
Overlap genePpm1l
Upstream geneSchip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14
Downstream geneLOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195D11.bB6Ng01-195D11.g
ACCGA017697GA017698
length1,103966
definitionB6Ng01-195D11.b B6Ng01-195D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagagaactccaggtttaaaataagtttttagtaaaatgtttc
taaagatctagtaaataacataaattcactttatagtcctttccaactca
agtccttctcattgtcacccacgacatctagtgacgtgaagaatgcagaa
ccttctctgatgcagtgggagcagagagcctagtctagttccatcattcc
tgcactttctaccatttaaaaactcccagtcccaagtgttttgtgcccca
aagtgccacccattattcatggttaccagccagtcggaactatgatactc
caactttggggtactttctaaggttattttaatatttagactgttgctca
gcattgcttcccatgggtctggtctctatgaagttcagagtacacggttt
ctgtgaatcttttttttttcccagagtgacatcagtgcttgctgtaaagt
ataaagtatgttaagattttttttccccccaggaatcccctataagaagt
tggtgtttttttctgctctggctgctcattgccagggtagtcagtctgat
gctgtgactcagtcacactggctgtcatctctgctgcctcagttaaggct
ctgagagagcagctctgttacttaatcagtgggttggctcattgccactc
atgtgacagcaggagtttgtagcccatgagactttttcaccggctctgtt
aattcagtagtggcttcatactgcccattgatagctgcaatatcagcaca
gcgaatgtagacgctttagagaaacttctatttagaggcatatttttagc
ccttctggatagtcagtgtgccttctgttgttagctcatatagtataaac
ttgaattctgtcatattaaggattaccactttaatatgacagaagcaacg
cagtcaccccaggacagtatttcctcgcaatgtgtctgtcagccttctgg
ctaacagcctaaagtcctccagaatcatgtaagttctacaaattgctata
acccgcttggccaatgctttcaagcaccctctactgttcggtatgccaaa
agaaaagattatcatataatagaatcctaagtgggaagggggagctttga
aga
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacatttggtggc
ccaaaagcatggccccaccacagagtcatctcattcattactgggtctag
gatatcaaatcatgtcccactataagctccatttgccttgacgtgggaat
cctctgaagggcagcaagggaaatttcataccttatgtgctcctactccc
ggttaacctctggggaagggatattatgcttcattgggccttatttgtcc
attgaaaacgccccatcggggagggtattcagcttaaagcaaaaaattat
cttggtaaagatggtttataaagaagaaaatggttaggaactcaagatag
ggaagaataaagccctatcttacctaatgtatatccaatacaggacaggg
tctgggttttttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_69283445_69284540
seq2: B6Ng01-195D11.b_45_1147

seq1  GAATTCAAAGAGAACTCCAGGTTTAAAATAAGTTTTTAGTAAAATGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGAACTCCAGGTTTAAAATAAGTTTTTAGTAAAATGTTTC  50

seq1  TAAAGATCTAGTAAATAACATAAATTCACTTTATAGTCCTTTCCAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCTAGTAAATAACATAAATTCACTTTATAGTCCTTTCCAACTCA  100

seq1  AGTCCTTCTCATTGTCACCCACGACATCTAGTGACGTGAAGAATGCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCTCATTGTCACCCACGACATCTAGTGACGTGAAGAATGCAGAA  150

seq1  CCTTCTCTGATGCAGTGGGAGCAGAGAGCCTAGTCTAGTTCCATCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGATGCAGTGGGAGCAGAGAGCCTAGTCTAGTTCCATCATTCC  200

seq1  TGCACTTTCTACCATTTAAAAACTCCCAGTCCCAAGTGTTTTGTGCCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTCTACCATTTAAAAACTCCCAGTCCCAAGTGTTTTGTGCCCCA  250

seq1  AAGTGCCACCCATTATTCATGGTTACCAGCCAGTCGGAACTATGATACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCACCCATTATTCATGGTTACCAGCCAGTCGGAACTATGATACTC  300

seq1  CAACTTTGGGGTACTTTCTAAGGTTATTTTAATATTTAGACTGTTGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGGGGTACTTTCTAAGGTTATTTTAATATTTAGACTGTTGCTCA  350

seq1  GCATTGCTTCCCATGGGTCTGGTCTCTATGAAGTTCAGAGTACACGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCTTCCCATGGGTCTGGTCTCTATGAAGTTCAGAGTACACGGTTT  400

seq1  CTGTGAATCTTTTTTTTTTCCCAGAGTGACATCAGTGCTTGCTGTAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATCTTTTTTTTTTCCCAGAGTGACATCAGTGCTTGCTGTAAAGT  450

seq1  ATAAAGTATGTTAAGATTTTTTTTCCCCCCAGGAATCCCCTATAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATGTTAAGATTTTTTTTCCCCCCAGGAATCCCCTATAAGAAGT  500

seq1  TGGTGTTTTTTTCTGCTCTGGCTGCTCATTGCCAGGGTAGTCAGTCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTTTTTCTGCTCTGGCTGCTCATTGCCAGGGTAGTCAGTCTGAT  550

seq1  GCTGTGACTCAGTCACACTGGCTGTCATCTCTGCTGCCTCAGTTAAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGACTCAGTCACACTGGCTGTCATCTCTGCTGCCTCAGTTAAGGCT  600

seq1  CTGAGAGAGCAGCTCTGTTACTTAATCAGTGGGTTGGCTCATTGCCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGAGCAGCTCTGTTACTTAATCAGTGGGTTGGCTCATTGCCACTC  650

seq1  ATGTGACAGCAGGAGTTTGTAG-CCATGAGACTTTTTCACCGGCTCTGTT  699
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGTGACAGCAGGAGTTTGTAGCCCATGAGACTTTTTCACCGGCTCTGTT  700

seq1  AATTCAGTAGTGGCTTCATACTGCCCATTGATAGCTGCAACATCAGCACA  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATTCAGTAGTGGCTTCATACTGCCCATTGATAGCTGCAATATCAGCACA  750

seq1  GCGAATGTAGACGCTTTAGAGAAACTTCTATTTAGAGGCATATTTTTAG-  798
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCGAATGTAGACGCTTTAGAGAAACTTCTATTTAGAGGCATATTTTTAGC  800

seq1  CCTTCTGGATAGTCAGTGTGCCTTCTGTTTGTTAGGCTCATATAGTAT-A  847
      ||||||||||||||||||||||||||| |||||| ||||||||||||| |
seq2  CCTTCTGGATAGTCAGTGTGCCTTCTG-TTGTTA-GCTCATATAGTATAA  848

seq1  ACTTGAATTCTGTCATATTAAGGATTACCAC-TTAATATGACAGAAGCAA  896
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTTGAATTCTGTCATATTAAGGATTACCACTTTAATATGACAGAAGCAA  898

seq1  CGCAGTCACACCAGGACAGTATTTTCCTCTGCAATGTGTCTGTCAGCCTT  946
      ||||||||| ||||||||||| ||||||| ||||||||||||||||||||
seq2  CGCAGTCACCCCAGGACAGTA-TTTCCTC-GCAATGTGTCTGTCAGCCTT  946

seq1  CTGGCT-ACAGCCTAGAGT-CTCCAG-ATCATGTAGGTTCTACACATTGT  993
      |||||| |||||||| ||| |||||| |||||||| |||||||| |||| 
seq2  CTGGCTAACAGCCTAAAGTCCTCCAGAATCATGTAAGTTCTACAAATTG-  995

seq1  CTATAACCCGCCTGG-CATTGC-TTCCAGCA-CCTCTATTGTTGGGTATG  1040
      ||||||||||| ||| || ||| ||| |||| |||||| |||| ||||||
seq2  CTATAACCCGCTTGGCCAATGCTTTCAAGCACCCTCTACTGTTCGGTATG  1045

seq1  GCAGAAGAAAGGATATTTCATATAATAG-ATCCTAAGTTGGA--GGGGGG  1087
       || |||||| ||| | ||||||||||| ||||||||| |||  |||| |
seq2  CCAAAAGAAAAGAT-TATCATATAATAGAATCCTAAGTGGGAAGGGGGAG  1094

seq1  CTTTGAAGA  1096
      |||||||||
seq2  CTTTGAAGA  1103