BAC Information

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BAC

Clone NameB6Ng01-195I16
Chromosome3 (Build37)
Map Location 77,078,071 - 77,079,225
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195I16.bB6Ng01-195I16.g
ACCGA017934GA017935
length1,1791,038
definitionB6Ng01-195I16.b B6Ng01-195I16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaagactgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttgcagatgatatga
tagtatatataagtgaccctaaaaattccaccagagaactcctaaacctg
ataaacagcttctgtgaagtagctggatataaaataaactcaaacaagtc
aatggcctttctctatacaaagaataaacaggctgagaaagaaattaggg
aaacaacacccttctcaatagtcacaaataatataaaatatcttggcgtg
actctaactaaggaagtgaaagatctgtatgataaaaacttcaaatctct
gaagaaagaaattaaagaagatctcagaagatagttattgctttattatt
gttaaagacatacacatgtgtgcacacacatgcccccccttcactgtaaa
tttagtgtttagtttactcataagtacccaggtccaaagttgaccacttc
aagtaagacaatattaatagggaattatctacagagaatatatttccctc
tctctagctttcctatagaacctgaagctcttcatctaagggtaggactt
tttggaatctcaaatacatatacttgaatgtctagttaggggaaccataa
ccaggtccatgggtacactacccctgctgtgtctaggagataacatctgg
catcagtgccctgtttctctgtctcatatgagcctttggttccttcttgt
gggatatttccctgagtcttaggtgtagagattaaattgcacatgtatca
gttgggagcttgggaccctatggacacttgtactctgcattttggccaga
tgtggatctttgtagtatctcatctgttgcaaagacacttcttctgagaa
tttgagcatatactactatatagatataggttattatattattattaaac
agttagaaatttgatttaacttatgtgatgtgccatattgccctctccgg
agtctctgactctcttctggtcattaatg
gaattccctcttcagacctataccacacttttaattggcttatgtgcttt
gttggtatctagaattttagttctttaaatattttgggtgacagttcttc
attggatgtggagttggtaaaatatttctaccatcctgtaggctgccaca
ttgtacaagtgatggtatcttttggccttaccgaactttcatgagcttcc
actcattaatgcctgagcttggttttttgcagaaaggttttttttttttt
tttttttccctgtgttactcaaggttattccccacattcttttctatcag
gttcactgtatatggttttatgtgagttttttttacatacttggacatga
gtttcctccagggtaaacattggaatctatttgccttcttttatatatag
aagtgcagtttaacacaccacaatgtgatgaacatagttgttttgatata
tatatatatatctcaagtgtccaaagatgtgtaaataaatgtctgggtca
gcaatttggttacatggatcaactttttttgtttttatgccaattccatg
cagtttttattactacaactctgtagtacagcttcaagtctgggatggct
gtttaagctatcctaggctttttgtttttccatatgatgctgagaaatat
ccttttcaagtctgtaaaaatctgtattggaatttttatgagaattgtat
acttttggtagaatggtcatttttactgttagtccttctgatctttgagc
attaaagatctttccatcacctgccatcaaatcatttaagacttgaagtt
tttttttttagtttttgttttttttcggtgtttgtttgtttgtttgtttt
atcatataagcccttttcacctgtttggtttctgttatcccaaagcattt
ggtattatctgaggttatatgaaagggtggtccttcctctattttgttgg
ccagtcactttggtattttatataaggagggttatgacttctttttcttt
tttaatcttggatccaaccacctgcttgaaagaattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77078071_77079225
seq2: B6Ng01-195I16.b_83_1227

seq1  AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGG  50

seq1  AAGCAATCCCACTAAAATCAGGGACTAGACAAGACTGCCCACTTTCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCCCACTAAAATCAGGGACTAGACAAGACTGCCCACTTTCTCCC  100

seq1  TACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACA  150

seq1  AAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCAC  200

seq1  TTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAG  250

seq1  AGAACTCCTAAACCTGATAAACAGCTTCTGTGAAGTAGCTGGATATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCTAAACCTGATAAACAGCTTCTGTGAAGTAGCTGGATATAAAA  300

seq1  TAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCT  350

seq1  GAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATAT  400

seq1  AAAATATCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATA  450

seq1  AAAACTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATAG  500

seq1  TTATTGCTTTATTATTGTTAAAGACATACACATGTGTGCACACACATGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTTTATTATTGTTAAAGACATACACATGTGTGCACACACATGCC  550

seq1  CCCCCTTCACTGTAAATTTAGTGTTTAGTTTACTCATAAGTACCCAGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCACTGTAAATTTAGTGTTTAGTTTACTCATAAGTACCCAGGTC  600

seq1  CAAAGTTGACCACTTCAAGTAAGACAATATTAATAGGGAATTATCTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGACCACTTCAAGTAAGACAATATTAATAGGGAATTATCTACAG  650

seq1  AGAATATATTTCCCTCTCTCTAGCTTTCCTATAGAACCTGAAGCTCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATATTTCCCTCTCTCTAGCTTTCCTATAGAACCTGAAGCTCTTCA  700

seq1  TCTAAGGGTAGGACTTTTTGGAATCTCAAATACATATACTTGAATGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGGTAGGACTTTTTGGAATCTCAAATACATATACTTGAATGTCTA  750

seq1  GTTAGGGGAACCATAACCAGGTCCATGGGTACACTACCCCTGCTGTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGGAACCATAACCAGGTCCATGGGTACACTACCCCTGCTGTGTCT  800

seq1  AGGAGATAACATCTGGCATCAGTGCCCTGTTTCTCTGTCTCATATGAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATAACATCTGGCATCAGTGCCCTGTTTCTCTGTCTCATATGAGCC  850

seq1  TTTGGTTCCTTCTTGTGGGATATTT-CCTGAGTCTTAGGTGTAGAGATTA  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTGGTTCCTTCTTGTGGGATATTTCCCTGAGTCTTAGGTGTAGAGATTA  900

seq1  AATTGCACATGTATCAGTT-GGAGCTTGGGACCCTATGGACACTTGTACT  948
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATTGCACATGTATCAGTTGGGAGCTTGGGACCCTATGGACACTTGTACT  950

seq1  CTGCATTTTGGCCAGATGTGGATCTTTGTAGTAATCTCCATCTGTTGCAA  998
      |||||||||||||||||||||||||||||||| |||| |||||||||| |
seq2  CTGCATTTTGGCCAGATGTGGATCTTTGTAGT-ATCT-CATCTGTTGC-A  997

seq1  AAGACACTTC-TCTGAAGAAATTTGAGCATTATACTTACTATAATAGGAT  1047
      |||||||||| |||||   |||||||||| ||||| |||||| ||| |||
seq2  AAGACACTTCTTCTGA--GAATTTGAGCA-TATAC-TACTAT-ATA-GAT  1041

seq1  ATA-GTTA-TATATATATATAAAACAGTTAGAAATTTGGAAATTATATTA  1095
      ||| |||| |||||   ||| |||||||||||||||||  | |||  |||
seq2  ATAGGTTATTATATTATTATTAAACAGTTAGAAATTTG--ATTTAACTTA  1089

seq1  TGTAGAAAGTGCCAATAATGCCCTCTTCCGTGGAGTCTCTGAC-ATC-TC  1143
      |||   | ||||| ||| |||||||| |   ||||||||||||  || ||
seq2  TGT--GATGTGCC-ATATTGCCCTCTCC---GGAGTCTCTGACTCTCTTC  1133

seq1  TGGTCATTAATG  1155
      ||||||||||||
seq2  TGGTCATTAATG  1145