BAC Information

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BAC

Clone NameB6Ng01-196A17
Chromosome3 (Build37)
Map Location 141,114,283 - 141,115,197
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621343, 4930590L14Rik, Pdha2
Downstream geneUnc5c, LOC100039923, Bmpr1b, Gabarapl2-ps3, Pdlim5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196A17.bB6Ng01-196A17.g
ACCGA018294GA018295
length8911,044
definitionB6Ng01-196A17.b B6Ng01-196A17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaactcaatataaacctcatcatgttcatttctggtgaccat
ttcaagatggatgactgttctgttcatgtaaagccagaagatgggagtct
attagtgcattaaaaaaaaaaaaaaaaaaacaaaaacaaaaacctggaca
cttactctgaatggatcaattttttcaaactttattaaatgtattatttt
attattataatgactcaacactactgtgtatacatccattgctcttactg
gtcttttgtcttataaattaactttaattaagtgaagttccttattttat
taaggcagttctgcatatggtagaaataatattctaaaatactaagtata
tgtatggatataaaagttaactgcctaattgcagtcttattctcataatg
cctaatttacaattccattgaatgtaatattggaaaaatatatagagaaa
aacaaacaaatattttatttatttatactgggtaaaggcagatatgtttc
tgagtattagtaaatcagaatgactcagtagattaaattttgtaactgtt
atcaaacatctgagttatctgagaacctaacttgaatcatttgagaaata
taaatgactggaaggaaagtacgcatctgcagaggcatccattgaaggta
ccattaggtgcatagacatcaaagacatgcgtactcaaaggttttaaaag
atggagcattttacctggtactgagtatcgacatgatgaaataactttca
aataagccatgatctgagtaaaaacatgagattggactttctacacctca
gaaatggtcactcaaaacagttgagtctaaaaatgagacatagaggagga
agacttcaccatacatctcactcacacctctatgactcgtt
gaattcatggttagataaactatgaacactacgagtgagaatcgagtgtt
aaacactagattttcaaactaagcttttagtgtactcattatcttttaaa
gagaatttactaaatattttctaacgaaataccatttactctgtggattg
aaataatacatagattaacattcagcaactctttttatctaggaaaacca
ataatagtacatagagtaaaagaataaacacactgtgaatcccaacgaat
ctttctgtttaacttttaaaatcatacttaggtattcatttccaggtctg
tgctatggggcagaaagctatctaggtcttcgaggcaccgactaaatagg
tcaggaaattttaaaacatagacacaagcttgcagcagactcctgcttgc
ctcaagactgtgcaagttatcagtactttgttaggtcaaagtgaagatgg
caggtggatcaacattagaccacccaaaggctagctatgttattaataac
aatgggcggccagtgtagataggaaaccctagtactagtccagttcaaaa
agattcaattccatgccattttttctttaaaaaattgaatcggcaaattt
aagatgtttaagttaaatcaagattcggtttaaaattaagggtcctttta
actggagagattacttgccccccggggggtttaaaggcggcaaataaagg
gaaaaagaatccctttttgccaaaataaaagaaattgggaattcgttatt
tttgcattctgaaggggattttttggaaactggtaaacagtgctttgctt
tttttgttagaggcagcttttttcatgcagtgcaaggtcgtagtttaact
agacaaaaccacgttggtatacggttggacttaaaaattcatgatatctt
aaacatagagattctgcaaatgaactgacgggagccttaggagacctata
ttcttctaacagtctgtaggttcaatgcgtatccaggatatgtctctcta
ggttctatactgtttccaaacatacgtgaggcccggcatcacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141114283_141115197
seq2: B6Ng01-196A17.b_45_935

seq1  GAATTCAGAAACTCAATATAAACCTCATCATGTTCATTTCTGGTGACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAACTCAATATAAACCTCATCATGTTCATTTCTGGTGACCAT  50

seq1  TTCAAGATGGATGACTGTTCTGTTCATGTAAAGCCAGAAGATGGGAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATGGATGACTGTTCTGTTCATGTAAAGCCAGAAGATGGGAGTCT  100

seq1  ATTAGTGCATTAAAAAAAAAAAAAAAAAAACAAAAACAAAAACCTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGCATTAAAAAAAAAAAAAAAAAAACAAAAACAAAAACCTGGACA  150

seq1  CTTACTCTGAATGGATCAATTTTTTCAAACTTTATTAAATGTATTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCTGAATGGATCAATTTTTTCAAACTTTATTAAATGTATTATTTT  200

seq1  ATTATTATAATGACTCAACACTACTGTGTATACATCCATTGCTCTTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAATGACTCAACACTACTGTGTATACATCCATTGCTCTTACTG  250

seq1  GTCTTTTGTCTTATAAATTAACTTTAATTAAGTGAAGTTCCTTATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTCTTATAAATTAACTTTAATTAAGTGAAGTTCCTTATTTTAT  300

seq1  TAAGGCAGTTCTGCATATGGTAGAAATAATATTCTAAAATACTAAGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGTTCTGCATATGGTAGAAATAATATTCTAAAATACTAAGTATA  350

seq1  TGTATGGATATAAAAGTTAACTGCCTAATTGCAGTCTTATTCTCATAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGATATAAAAGTTAACTGCCTAATTGCAGTCTTATTCTCATAATG  400

seq1  CCTAATTTACAATTCCATTGAATGTAATATTGGAAAAATATATAGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTTACAATTCCATTGAATGTAATATTGGAAAAATATATAGAGAAA  450

seq1  AACAAACAAATA-TTTATTTA-TTATACTGGGTAAAGGCAGATATG-TTC  497
      |||||||||||| |||||||| |||||||||||||||||||||||| |||
seq2  AACAAACAAATATTTTATTTATTTATACTGGGTAAAGGCAGATATGTTTC  500

seq1  TGAGTATTAGTAAATCAGAATGACTCAGTAGATTAAATTTTGTAACTGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTAGTAAATCAGAATGACTCAGTAGATTAAATTTTGTAACTGTT  550

seq1  ATCAAACATCTGAGTTATCTGAGAACCTAACTTGAATCATTTGAGAAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACATCTGAGTTATCTGAGAACCTAACTTGAATCATTTGAGAAATA  600

seq1  TAAATGACTGGAAGGAAAGTACGCATCTGCAGAGGCATCCATTGAAGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACTGGAAGGAAAGTACGCATCTGCAGAGGCATCCATTGAAGGTA  650

seq1  CCATTAGGTGCATAGACATCAAAGACATGCGTACTCAAAGGTTTTAAAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGGTGCATAGACATCAAAGACATGCGTACTCAAAGGTTTTAAAAG  700

seq1  AT-GAGCATTTTACCTGGGTACTGAGTAATCGACATGATGAAATAACTTT  746
      || ||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  ATGGAGCATTTTACCT-GGTACTGAGT-ATCGACATGATGAAATAACTTT  748

seq1  CAAATAAGCCAATGATCTTGAGTAAAAACAATGAGATTTGGACTTTCCTA  796
      |||||||||| |||||| ||||||||||| |||||| ||||||||| |||
seq2  CAAATAAGCC-ATGATC-TGAGTAAAAAC-ATGAGA-TTGGACTTT-CTA  793

seq1  CACCCCAAGAAATGGTCACTCAAAAACAGTTTGAGTCCTAAAAAATGAAG  846
      |||| | |||||||||||||| ||||||| |||||||   ||||||||  
seq2  CACCTC-AGAAATGGTCACTC-AAAACAG-TTGAGTC--TAAAAATGA--  836

seq1  AACATAGAGGAAGAAAAGACATTTCAACACATACATTCTCACTTCCACAA  896
       |||||||||| |  |||||  ||||   |||||| |||||||  ||| |
seq2  GACATAGAGGAGG--AAGAC--TTCA--CCATACA-TCTCACT--CAC-A  876

seq1  CCTCTTTAAATGACTCGTT  915
      |||||    ||||||||||
seq2  CCTCT----ATGACTCGTT  891