BAC Information

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BAC

Clone NameB6Ng01-196G12
Chromosome3 (Build37)
Map Location 14,882,624 - 14,883,751
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3
Downstream geneCar2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196G12.bB6Ng01-196G12.g
ACCGA018559GA018560
length1,0961,107
definitionB6Ng01-196G12.b B6Ng01-196G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcaatcttacagcacatgccattgctgtt
ctgttcaggaacttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaatggaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagacg
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccattc
ttctgagatcttctttaatatctttcttcagagatttgaagttttatcat
acagatcttttcactcccttagttagaagtcatgccaagatattttgata
ttattttgtgactatttgagaaaggggttgcttccctaaatttctttcct
caagcctgtttattctttgttgtagagaaaggccaattgactttgttgaa
gttattttaatatcccagcttactctcaccggagcctgtttactca
gaattccagccgtgccaatgagtgtgaagctcgagagccagggatgaggc
agagtggcacaggataagaggccactctcacaccgagagtcctagaagcc
ctgctgaaggaagcccttaaagaaccagtaaggaaggaccaggaacagaa
cagctcacatacaagaagtcagtataaaagcctgctcaaagaagtttcta
gctttatcactgggatgaagaaaaagaagacaagcagtgacatcagccag
gcaggacttgcagccagaagggcagtacagaccactgtaccaaggagagg
ttttctgtttaagtgtacaaggaagccaggggacagatgcaaaggagaga
ataacacagactagaactaagacaattaggagctttaggcaatctaattc
atctcttcattttacagacaagacggagggtctgggtgactcttgctacc
tgtgcctttctgtgtgtctttctaagaattacttccagaaaaagatccaa
gtccctttgatatggaaactctggctctggcttcccttttggcctgtgaa
cctaccagcattcctcttaaggaatgagagccaggttttgtggatttgta
ctgtgtctctaggtcttaccttctacataagcctgcatgatttgttctag
tcttcaagcctccatgttcatgtgtggaatacatatagcatacccagggc
tgctgagtgataaatttcacttatgtggcttagctgtggcttcctgtgtt
attaactcctctgttagtgtccctgttatcatcgggagaagtccccattt
gtgaaattagatttaagctttcagtgtgagtggagtccacgatagggctt
cagtatagccctgagcaacataggcagtctcttgcaacttcccctgctcc
attgtaaactgatgagggagaattctactccagaatatcattatagaaag
agggttctggagatctcaaggccttgcatggtttcacgtctgaataataa
tatatgattatataatacttttcactaaaaaatatagttgtctttttctg
gtgcactactgatgaaaagagcattaattctgtgtgagtttacattctaa
ctactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14882624_14883751
seq2: B6Ng01-196G12.g_65_1171 (reverse)

seq1  TTAGTAAGTTTAGAATGTAAAAACTCAAACACACTAATTAAATGCTCCTT  50
      ||||||   |||||||||  ||||||| |||    |||| |||||| |||
seq2  TTAGTA--GTTAGAATGT--AAACTCACACA---GAATT-AATGCT-CTT  41

seq1  TTCCATTCAAGTTAGTGGCACAG-AAAAGACAAACTATTATTTTTTTAGT  99
      |||   |||   |||||   ||| ||||||| ||||||   |||||||||
seq2  TTC--ATCA--GTAGTGCACCAGAAAAAGAC-AACTAT--ATTTTTTAGT  84

seq1  GAAAAAGTATTATAATAATCATTATATTATTTATTCAGACGTGAAACCAT  149
      | ||||||||||| ||||||| ||||||| ||||||||||||||||||||
seq2  G-AAAAGTATTAT-ATAATCA-TATATTA-TTATTCAGACGTGAAACCAT  130

seq1  GCCAGGCCTTTGAGATCTTCCAG-ACCCTCTTTCTTATAATGATATTCTG  198
      || ||||| |||||||| ||||| |||||||||| |||||||||||||||
seq2  GCAAGGCC-TTGAGATC-TCCAGAACCCTCTTTC-TATAATGATATTCTG  177

seq1  GAGTAGAATTCTCCCTCATCAGTTTACAATGGAGCAGGGGAAGTTGCAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAATTCTCCCTCATCAGTTTACAATGGAGCAGGGGAAGTTGCAAG  227

seq1  AGACTGCCTATGTTGCTCAGGGCTATACTGAAGCCCTATCGTGGACTCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCCTATGTTGCTCAGGGCTATACTGAAGCCCTATCGTGGACTCCA  277

seq1  CTCACACTGAAAGCTTAAATCTAATTTCACAAATGGGGACTTCTCCCGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACTGAAAGCTTAAATCTAATTTCACAAATGGGGACTTCTCCCGAT  327

seq1  GATAACAGGGACACTAACAGAGGAGTTAATAACACAGGAAGCCACAGCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGGGACACTAACAGAGGAGTTAATAACACAGGAAGCCACAGCTA  377

seq1  AGCCACATAAGTGAAATTTATCACTCAGCAGCCCTGGGTATGCTATATGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATAAGTGAAATTTATCACTCAGCAGCCCTGGGTATGCTATATGT  427

seq1  ATTCCACACATGAACATGGAGGCTTGAAGACTAGAACAAATCATGCAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACACATGAACATGGAGGCTTGAAGACTAGAACAAATCATGCAGGC  477

seq1  TTATGTAGAAGGTAAGACCTAGAGACACAGTACAAATCCACAAAACCTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGAAGGTAAGACCTAGAGACACAGTACAAATCCACAAAACCTGG  527

seq1  CTCTCATTCCTTAAGAGGAATGCTGGTAGGTTCACAGGCCAAAAGGGAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTCCTTAAGAGGAATGCTGGTAGGTTCACAGGCCAAAAGGGAAG  577

seq1  CCAGAGCCAGAGTTTCCATATCAAAGGGACTTGGATCTTTTTCTGGAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCAGAGTTTCCATATCAAAGGGACTTGGATCTTTTTCTGGAAGT  627

seq1  AATTCTTAGAAAGACACACAGAAAGGCACAGGTAGCAAGAGTCACCCAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAGAAAGACACACAGAAAGGCACAGGTAGCAAGAGTCACCCAGA  677

seq1  CCCTCCGTCTTGTCTGTAAAATGAAGAGATGAATTAGATTGCCTAAAGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGTCTTGTCTGTAAAATGAAGAGATGAATTAGATTGCCTAAAGCT  727

seq1  CCTAATTGTCTTAGTTCTAGTCTGTGTTATTCTCTCCTTTGCATCTGTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTGTCTTAGTTCTAGTCTGTGTTATTCTCTCCTTTGCATCTGTCC  777

seq1  CCTGGCTTCCTTGTACACTTAAACAGAAAACCTCTCCTTGGTACAGTGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCCTTGTACACTTAAACAGAAAACCTCTCCTTGGTACAGTGGT  827

seq1  CTGTACTGCCCTTCTGGCTGCAAGTCCTGCCTGGCTGATGTCACTGCTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGCCCTTCTGGCTGCAAGTCCTGCCTGGCTGATGTCACTGCTTG  877

seq1  TCTTCTTTTTCTTCATCCCAGTGATAAAGCTAGAAACTTCTTTGAGCAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTCTTCATCCCAGTGATAAAGCTAGAAACTTCTTTGAGCAGG  927

seq1  CTTTTATACTGACTTCTTGTATGTGAGCTGTTCTGTTCCTGGTCCTTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATACTGACTTCTTGTATGTGAGCTGTTCTGTTCCTGGTCCTTCCT  977

seq1  TACTGGTTCTTTAAGGGCTTCCTTCAGCAGGGCTTCTAGGACTCTCGGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTCTTTAAGGGCTTCCTTCAGCAGGGCTTCTAGGACTCTCGGTG  1027

seq1  TGAGAGTGGCCTCTTATCCTGTGCCACTCTGCCTCATCCCTGGCTCTCGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGGCCTCTTATCCTGTGCCACTCTGCCTCATCCCTGGCTCTCGA  1077

seq1  GCTTCACACTCATTGGCACGGCTGGAATTC  1128
      ||||||||||||||||||||||||||||||
seq2  GCTTCACACTCATTGGCACGGCTGGAATTC  1107