BAC Information

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BAC

Clone NameB6Ng01-196H10
Chromosome3 (Build37)
Map Location 69,825,334 - 69,826,373
singlet/doubletsinglet
Overlap geneGm414
Upstream geneSmc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik
Downstream geneLOC100041384, LOC625868, LOC670542, EG625901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196H10.bB6Ng01-196H10.g
ACCGA018598GA018599
length6071,044
definitionB6Ng01-196H10.b B6Ng01-196H10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttttactctgtactgcatttttaatagggttatttggttc
tctggagtataactttttgagttctttgtatattttggatattaggcctc
tatcggacgtagggttggtaaagatcccaatctgtggattgctattttgt
cctattgacagtgtcctttgcctttcaaaagcttttcaattttataaggt
cctatttgtcaattctttttttttaaagatttatttatttatttatttat
ttatttatttatttatttattatatgtaagtacactgtagctgtcttcag
acgcaccagaagagggcatcagatctcattaagggtggttgtgagacacc
atgtggttgctggaatttgaactccggaccttcggaagagcagtcgggtg
ctcttacccactgagccatctcaccagccccatttgtcaattcttgatct
tagagcataagccattggtattctgttcaggaaaatttcccctttgacaa
tgtatttgaggttctttcccatttatatgggaggagatgggggagaagaa
cagagggtcaggagtttgaaagtaggcatgtagcagtgggggagagggaa
ctggggg
gaattctctgagaaaataacattaagcaaaaactccatgaaggaattaaa
atttcctgaagtacatttttaaaagacagtgtctttaaacaacaaaggaa
aaacatcacagtgcatccaggtagtggccaaggacggagcctgggggctg
agaggcagggtgggggaggggtcatgcaagtctgacatcagtgtcttctg
attgctgagaagagtcgccgtgagcaagacaatcctcatataactcatga
tgaccgtcatggtaggaagcaaacaggcatagtactgaagcaatacctga
gagctttacaccctgatccccagacagcaggcagagagggagacagactg
ggactggtttgggctttttacacctcaaagcccctgatacacctccccca
atatggctacccttcttaatccttcctatatagttcaccaactgggaact
aagcatgcaaatataacagctgggtgggggggcggctttctcatttcaaa
ccaccacagatacacctattcatccaagcagaccacttatatagagctca
cctaaatctaaattaattattctttctgaaattcatttttatttgcagag
taaaaaaaaaatgccttttacttggaataattcaagactaatttcttcaa
aagtttaccattcagataatcacactcaatgaaatcacaaaattatattt
taattataattaaagctaatgggatataatgaaatagaaatgaaaagaca
ccaaaaaaaattgatggaatgaaaaatcatgttcagtagatttcttcttt
gaaagaaaactgtaaatgttagaagaaaccctttaattaatcgcttgcca
tagagatgagggctgaaaggcaggctcctctgtttgaagagagtcctcat
agcagagagggatagggaacagactgggcagaggaagtgagagcacacaa
gaaagcccaggctttagctgccttcagccatggtgtctcctcaaggtggt
ggttacctgttgatagaaactaccaatccacatgcctgaaatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_69825334_69826373
seq2: B6Ng01-196H10.g_63_1106 (reverse)

seq1  CTATCTCAGGCATGT-GCTTGGTTGTTTCTTTCAACAGTTTAACCA-CAC  48
      |||| |||||||||| | ||||| |||||| |||||||  |||||| |||
seq2  CTATTTCAGGCATGTGGATTGGTAGTTTCTATCAACAG-GTAACCACCAC  49

seq1  CTTTGGAGGAGACA-CATGGCTGAGGGCAAGCTGA--GCTTGGCTTTCTT  95
      |||  ||||||||| ||||||||| ||| |||| |   || |||||||||
seq2  CTT--GAGGAGACACCATGGCTGAAGGC-AGCTAAAGCCTGGGCTTTCTT  96

seq1  GTGTGCTCTCACTTCCTCTGCCCAGTCTG-TCCCTATCCCTCTCTGCTAT  144
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGTGCTCTCACTTCCTCTGCCCAGTCTGTTCCCTATCCCTCTCTGCTAT  146

seq1  GA-GACTCTTCTTCAAACAGAGGAGCCTGCC-TTCAGCCCTCATCTCTAT  192
      || ||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GAGGACTC-TCTTCAAACAGAGGAGCCTGCCTTTCAGCCCTCATCTCTAT  195

seq1  GGCAAGCGATTTATTAAAGGGTTTCTTCTAAACATTTACAGTTTTCTTTC  242
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  GGCAAGCGATTAATTAAAGGGTTTCTTCT-AACATTTACAGTTTTCTTTC  244

seq1  AAAGAGGAATTCTACTGAACATGATTTTTCATTCCATCAATTTTTTTTGG  292
      ||||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAATCTACTGAACATGATTTTTCATTCCATCAATTTTTTTTGG  294

seq1  TGTCTTTTCATTTCTATTTCATTATATCCCATTAGCTTTAATTATAATTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCATTTCTATTTCATTATATCCCATTAGCTTTAATTATAATTA  344

seq1  AAATATAATTTTGTGATTTCATTGAGTGTGATTATCTGAATGGTAAACTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTTTGTGATTTCATTGAGTGTGATTATCTGAATGGTAAACTT  394

seq1  TTGAAGAAATTAGTCTTGAATTATTCCAAGTAAAAGGCA-TTTTTTTTTA  441
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGAAGAAATTAGTCTTGAATTATTCCAAGTAAAAGGCATTTTTTTTTTA  444

seq1  CTCTGCAAATAAAAATGAATTTCAGAAAGAATAATTAATTTAGATTTAGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAATAAAAATGAATTTCAGAAAGAATAATTAATTTAGATTTAGG  494

seq1  TGAGCTCTATATAAGTGGTCTGCTTGGATGAATAGGTGTATCTGTGGTGG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTATATAAGTGGTCTGCTTGGATGAATAGGTGTATCTGTGGTGG  544

seq1  TTTG-AATGAGAAAGCCGCCCCCCCACCCAGCTGTTATATTTGCATGCTT  590
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGAGAAAGCCGCCCCCCCACCCAGCTGTTATATTTGCATGCTT  594

seq1  AGTTCCCAGTTGGTGAACTATATAGGAAGGATTAAGAAGGGTAGCCATAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAGTTGGTGAACTATATAGGAAGGATTAAGAAGGGTAGCCATAT  644

seq1  TGGGGGAGGTGTATCAGGGGCTTTGAGGTGTAAAAAGCCCAAACCAGTCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGTGTATCAGGGGCTTTGAGGTGTAAAAAGCCCAAACCAGTCC  694

seq1  CAGTCTGTCTCCCTCTCTGCCTGCTGTCTGGGGATCAGGGTGTAAAGCTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTCTCCCTCTCTGCCTGCTGTCTGGGGATCAGGGTGTAAAGCTC  744

seq1  TCAGGTATTGCTTCAGTACTATGCCTGTTTGCTTCCTACCATGACGGTCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATTGCTTCAGTACTATGCCTGTTTGCTTCCTACCATGACGGTCA  794

seq1  TCATGAGTTATATGAGGATTGTCTTGCTCACGGCGACTCTTCTCAGCAAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTTATATGAGGATTGTCTTGCTCACGGCGACTCTTCTCAGCAAT  844

seq1  CAGAAGACACTGATGTCAGACTTGCATGACCCCTCCCCCACCCTGCCTCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACACTGATGTCAGACTTGCATGACCCCTCCCCCACCCTGCCTCT  894

seq1  CAGCCCCCAGGCTCCGTCCTTGGCCACTACCTGGATGCACTGTGATGTTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCCAGGCTCCGTCCTTGGCCACTACCTGGATGCACTGTGATGTTT  944

seq1  TTCCTTTGTTGTTTAAAGACACTGTCTTTTAAAAATGTACTTCAGGAAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTTGTTTAAAGACACTGTCTTTTAAAAATGTACTTCAGGAAAT  994

seq1  TTTAATTCCTTCATGGAGTTTTTGCTTAATGTTATTTTCTCAGAGAATTC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCCTTCATGGAGTTTTTGCTTAATGTTATTTTCTCAGAGAATTC  1044