BAC Information

Click to search

BAC

Clone NameB6Ng01-197I07
Chromosome3 (Build37)
Map Location 75,871,693 - 75,872,200
singlet/doubletsinglet
Overlap genenone
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1, Golph4
Downstream geneFstl5, LOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197I07.bB6Ng01-197I07.g
ACCGA019357GA019358
length508372
definitionB6Ng01-197I07.b B6Ng01-197I07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaatttgaaaatcctaagagtctttagaatgtaaaaatatggcgcaaaat
taccatttcacaagtgtaactgaaactatgaaaacagcaaataagaactt
gatgttcagacacaatttcctgttgtagactcccatgtttggagctcttc
ccccatctagtggctaaatttagtattgcataagtggatttatggtcata
cagctccattcgttatttctaggcaattgttaaaacaggttgaagtcaga
aggtgtctcagtactgtgaaggagaaggcatatattgcagaattctactt
gcaatataaatctgctggcaaaggaaaaacaagttttctccaatagacac
ttactgattatattaaccacgctttggtatttttgtagatttttgctttg
gggagaaattttttcttatcagtcttttggtttgctattttgatttcttt
gtttgtgtttatatggggcttgagtgtgtttgttgttttatgttgtggtg
gtgatttg

ttaccatttgttctctgctttctcaataatagctgatcactcaatggtgg
tgcagaagagagaataggatgggacttctgctagccaggggaagaagaaa
gagaaggggagagagagagagagggagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagattcagagt
gagagagagattcagagccattagaaggaatgaagaagttcaatagagct
taactgttcaataaagttcaacaggagcatggaaggacaaaaagataagt
atttaggggatttttgtctgggagccatattcatttagggaattaaaata
gatcaaatgactgtccagggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75871693_75872200
seq2: B6Ng01-197I07.b_54_561 (reverse)

seq1  CAAATCACCACCACAACATAAAACAACAAACACACTCAAGCCCCATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACCACCACAACATAAAACAACAAACACACTCAAGCCCCATATAA  50

seq1  ACACAAACAAAGAAATCAAAATAGCAAACCAAAAGACTGATAAGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACAAAGAAATCAAAATAGCAAACCAAAAGACTGATAAGAAAAAA  100

seq1  TTTCTCCCCAAAGCAAAAATCTACAAAAATACCAAAGCGTGGTTAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCCAAAGCAAAAATCTACAAAAATACCAAAGCGTGGTTAATATA  150

seq1  ATCAGTAAGTGTCTATTGGAGAAAACTTGTTTTTCCTTTGCCAGCAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAGTGTCTATTGGAGAAAACTTGTTTTTCCTTTGCCAGCAGATT  200

seq1  TATATTGCAAGTAGAATTCTGCAATATATGCCTTCTCCTTCACAGTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCAAGTAGAATTCTGCAATATATGCCTTCTCCTTCACAGTACTG  250

seq1  AGACACCTTCTGACTTCAACCTGTTTTAACAATTGCCTAGAAATAACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTTCTGACTTCAACCTGTTTTAACAATTGCCTAGAAATAACGAA  300

seq1  TGGAGCTGTATGACCATAAATCCACTTATGCAATACTAAATTTAGCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGTATGACCATAAATCCACTTATGCAATACTAAATTTAGCCACT  350

seq1  AGATGGGGGAAGAGCTCCAAACATGGGAGTCTACAACAGGAAATTGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGGGAAGAGCTCCAAACATGGGAGTCTACAACAGGAAATTGTGTC  400

seq1  TGAACATCAAGTTCTTATTTGCTGTTTTCATAGTTTCAGTTACACTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATCAAGTTCTTATTTGCTGTTTTCATAGTTTCAGTTACACTTGTG  450

seq1  AAATGGTAATTTTGCGCCATATTTTTACATTCTAAAGACTCTTAGGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTAATTTTGCGCCATATTTTTACATTCTAAAGACTCTTAGGATTT  500

seq1  TCAAATTC  508
      ||||||||
seq2  TCAAATTC  508


| Home | SequenceCutter | Blast | Download |