BAC Information

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BAC

Clone NameB6Ng01-197I14
Chromosome3 (Build37)
Map Location 75,874,134 - 75,987,433
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197I14.bB6Ng01-197I14.g
ACCGA019371GA019372
length1,1501,099
definitionB6Ng01-197I14.b B6Ng01-197I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,874,134 - 75,875,268)(75,986,337 - 75,987,433)
sequence
gaattcctctactgtggatgataggatagaatgtgatttccatttgtaac
atatattggaagttttaaaattaaataccatgattcatggaaaaaaatgt
agtagttacaaactatgtttaaaactaatagtaaccaatgagtttatatt
tcagtactgaagtctagttacctttggaacttgtatttattatatttatc
tatttctttacttggggttacaatgcatggcactggtggataggagaaga
agcactatgagaactggttctctctgccccttgtgtaggtaccagggatt
gaactcaggtcttcaggcttggcaacaacagtcctcagctgctttgccag
ttcctcagccctggaatttctcttcttatatctaaaattgtatctcacaa
ttttaaagaaaacaaacttgaaaatctgtttagaacaacccaatatacac
atatctctgtaaaacagttttgttttaaattttatgttaggtaaagatgt
ttacaaaaaaaaaaaaaaaaaaaccaaaaccctaaatctgtattttcttc
agcaacatggttgtatgtttgagaatctcattggcacaactcatatataa
ctagcaaactacttgaatagcgcattagaatttaatagcacttaaataaa
gcacataaattgactagagagaatagataagaagaaggaaaaagggaagt
tgttagtacaaaaaagaagaaagtataaatttcaaatgccaaacataaaa
tcttttgtatgttgtaattaaggatggggttgttgtaaactggccacaac
acaaaggcataattttaaactctttcttaatgaaattaactggtatactt
aacatatttgaaaatatgcactcttctgatattagaaaggcaatgccatg
atgtcaatgcaacattgagggcatgtgggggacagtgggacattcatgct
atgccatagccttctgattctcttaattaaagaagcttaggatattacga
ctatgagctttcttttttgctttggttcttcttttacattccgtgggact
aagaagatccacaaaagtaagaaagtgccatagaaattctgctgaccaag
caaaacacaatccttccttggcaacaaatgtttgtaaaaaacttgtctta


gaattctaatgaaagcaaaatcatttagacattcactagtttcagaaaag
aaatgggtggagaattaatacaggaaataacaatagaattctactgggta
ctgtattatctaaaaataatcaatagaggatttttataaggatttaatgt
tccatttttatcatttacaatgtgatcaattacctataggtgccaccatc
atgtcctagtctataattgctgaaaatatcagccagtattctttcagagt
catttttcaatttctaacttctttcactctaagattttcctaaggcacac
atgtaacctaagattcaggctagaatatatataatttagcttccatgact
atgttagctcaatgaatattattcagagatgcaccacattgctacttcag
tacatttcctgtgcatataagtggggatatatgcttgtggacatgaaaga
gagaagcagaaatatgataaagtcctatttgtgtacatattaaatggctt
tttaaagaaaaagaaagaaatgacaatgaaagtaatttttaaatgtttgg
gaacacagatttttattattatatttttctctgctaatataaattttata
ttaaagcccatacataaaatataaacatcaagaatagatttgtatttagt
tgattttatatttctatacataaatatactgatatgctaagaactgtctt
tcatttgtagaaatattacatcttcaaaacagaacaaggcaacaccaaaa
cattttagtttcccaagaggaaaatattcaaactgaagaaaggcagcaga
atttgaaaagaaaggcataattaggttacagaaaaaaacatctaagatat
ttctttataaaattttattaatagaatttagaatgatctaagtaaattcg
gtttggccgtaatgctagactacacattggagagcaggaaatcaccactg
ctcttcgggaattatacacaaagattgcattagataagtgtgtaattata
ctttaggaaagtaggaagggattgagatagtcaaacttgatagtagttaa
taagaaagggcaatgtgtttcatgcaattatgggccatgcatgcttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75874134_75875268
seq2: B6Ng01-197I14.b_42_1191

seq1  GAATTCCTCTACTGTGGATGATAGGATAGAATGTGATTTCCATTTGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTACTGTGGATGATAGGATAGAATGTGATTTCCATTTGTAAC  50

seq1  ATATATTGGAAGTTTTAAAATTAAATACCATGATTCATGGAAAAAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGGAAGTTTTAAAATTAAATACCATGATTCATGGAAAAAAATGT  100

seq1  AGTAGTTACAAACTATGTTTAAAACTAATAGTAACCAATGAGTTTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTACAAACTATGTTTAAAACTAATAGTAACCAATGAGTTTATATT  150

seq1  TCAGTACTGAAGTCTAGTTACCTTTGGAACTTGTATTTATTATATTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTGAAGTCTAGTTACCTTTGGAACTTGTATTTATTATATTTATC  200

seq1  TATTTCTTTACTTGGGGTTACAATGCATGGCACTGGTGGATAGGAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTACTTGGGGTTACAATGCATGGCACTGGTGGATAGGAGAAGA  250

seq1  AGCACTATGAGAACTGGTTCTCTCTGCCCCTTGTGTAGGTACCAGGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATGAGAACTGGTTCTCTCTGCCCCTTGTGTAGGTACCAGGGATT  300

seq1  GAACTCAGGTCTTCAGGCTTGGCAACAACAGTCCTCAGCTGCTTTGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGTCTTCAGGCTTGGCAACAACAGTCCTCAGCTGCTTTGCCAG  350

seq1  TTCCTCAGCCCTGGAATTTCTCTTCTTATATCTAAAATTGTATCTCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGCCCTGGAATTTCTCTTCTTATATCTAAAATTGTATCTCACAA  400

seq1  TTTTAAAGAAAACAAACTTGAAAATCTGTTTAGAACAACCCAATATACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAAAACAAACTTGAAAATCTGTTTAGAACAACCCAATATACAC  450

seq1  ATATCTCTGTAAAACAGTTTTGTTTTAAATTTTATGTTAGGTAAAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTGTAAAACAGTTTTGTTTTAAATTTTATGTTAGGTAAAGATGT  500

seq1  TTACAAAAAAAAAAAAAAAAAAACCAAAACCCTAAATCTGTATTTTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAAAAAAAAAAAAAAAAACCAAAACCCTAAATCTGTATTTTCTTC  550

seq1  AGCAACATGGTTGTATGTTTGAGAATCTCATTGGCACAACTCATATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATGGTTGTATGTTTGAGAATCTCATTGGCACAACTCATATATAA  600

seq1  CTAGCAAACTACTTGAATAGCGCATTAGAATTTAATAGCACTTAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAACTACTTGAATAGCGCATTAGAATTTAATAGCACTTAAATAAA  650

seq1  GCACATAAATTGACTAGAGAGAATAGATAAGAAGAAAGGAAAAAGGGAAG  700
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCACATAAATTGACTAGAGAGAATAGATAAGAAG-AAGGAAAAAGGGAAG  699

seq1  TTGTTAGTACAAAAAAGAAGAAAGTATAAATTTCAAATGCCAAACATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTACAAAAAAGAAGAAAGTATAAATTTCAAATGCCAAACATAAA  749

seq1  ATCTTTTGTATGTTGTAATTAAGGATGGGGTTGTTGTAAACTGGCCACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGTATGTTGTAATTAAGGATGGGGTTGTTGTAAACTGGCCACAA  799

seq1  CACAAAGGCATAATTTTAAACTCTTTCTTAATGAAATTAACTGGTATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGCATAATTTTAAACTCTTTCTTAATGAAATTAACTGGTATACT  849

seq1  TAACATATTTGAAAATATGCACTCTTCTGATATTAG-AAGGCAATGCCAT  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAACATATTTGAAAATATGCACTCTTCTGATATTAGAAAGGCAATGCCAT  899

seq1  GATGTCAATGCCACATTGAGGGCATGT-GGGGACAGTGGGACATTCATGC  948
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  GATGTCAATGCAACATTGAGGGCATGTGGGGGACAGTGGGACATTCATGC  949

seq1  TATGCCATAGCCTTCTGATTCTCTTAATT-AAGATGCTTAGGATATTTAC  997
      ||||||||||||||||||||||||||||| |||| |||||||||| ||||
seq2  TATGCCATAGCCTTCTGATTCTCTTAATTAAAGAAGCTTAGGATA-TTAC  998

seq1  GACTATGAGCTTTC-TTTTTGCTTT-GTTC-TCTTTT-CATT-CGTGGGA  1042
      |||||||||||||| |||||||||| |||| |||||| |||| |||||||
seq2  GACTATGAGCTTTCTTTTTTGCTTTGGTTCTTCTTTTACATTCCGTGGGA  1048

seq1  CTAAG-AGAT-CAC-AGAGTAAG-AAGTGC--TAG-ACTTCTGCTTGTCA  1085
      ||||| |||| ||| | |||||| ||||||  ||| | |||||| || | 
seq2  CTAAGAAGATCCACAAAAGTAAGAAAGTGCCATAGAAATTCTGC-TGACC  1097

seq1  CAGC-AAACAC-ATTCTTCCTTTGCAACAAATG-TTGTAAAAGACTTGTC  1132
       ||| |||||| || ||||||| |||||||||| |||||||| |||||||
seq2  AAGCAAAACACAATCCTTCCTTGGCAACAAATGTTTGTAAAAAACTTGTC  1147

seq1  TTA  1135
      |||
seq2  TTA  1150


seq1: chr3_75986337_75987433
seq2: B6Ng01-197I14.g_69_1167 (reverse)

seq1  TTCAAGCATGCATTGCCCCATAA-TGCATG-AACACATTGCCCTTTC-TA  47
      |||||||||||| || ||||||| |||||| |||||||||||||||| ||
seq2  TTCAAGCATGCA-TGGCCCATAATTGCATGAAACACATTGCCCTTTCTTA  49

seq1  TTAACTACTATCAAGTTTGACTATCTCAAATCCCTTCCTACTTTCCTAAA  97
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTAACTACTATCAAGTTTGACTATCTC-AATCCCTTCCTACTTTCCTAAA  98

seq1  GTATAATTACACACTTTATCT-ATGCAATCTTTGTGT-TATATTCCGAAG  145
      |||||||||||||| |||||| ||||||||||||||| ||  | ||||||
seq2  GTATAATTACACAC-TTATCTAATGCAATCTTTGTGTATAATTCCCGAAG  147

seq1  AGCAGTGGTGATTTCCTGCTCTCCATTGTGTAGTCTAGCATTACGGCCAA  195
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCAGTGGTGATTTCCTGCTCTCCAATGTGTAGTCTAGCATTACGGCCAA  197

seq1  ACCGAATTTACTTAGATCATTCTAAATTCTATTAATAAAATTTTATAAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATTTACTTAGATCATTCTAAATTCTATTAATAAAATTTTATAAAG  247

seq1  AAATATCTTAGATGTTTTTTTCTGTAACCTAATTATGCCTTTCTTTTCAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTTAGATGTTTTTTTCTGTAACCTAATTATGCCTTTCTTTTCAA  297

seq1  ATTCTGCTGCCTTTCTTCAGTTTGAATATTTTCCTCTTGGGAAACTAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCTGCCTTTCTTCAGTTTGAATATTTTCCTCTTGGGAAACTAAAA  347

seq1  TGTTTTGGTGTTGCCTTGTTCTGTTTTGAAGATGTAATATTTCTACAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGTGTTGCCTTGTTCTGTTTTGAAGATGTAATATTTCTACAAAT  397

seq1  GAAAGACAGTTCTTAGCATATCAGTATATTTATGTATAGAAATATAAAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGTTCTTAGCATATCAGTATATTTATGTATAGAAATATAAAAT  447

seq1  CAACTAAATACAAATCTATTCTTGATGTTTATATTTTATGTATGGGCTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAATACAAATCTATTCTTGATGTTTATATTTTATGTATGGGCTTT  497

seq1  AATATAAAATTTATATTAGCAGAGAAAAATATAATAATAAAAATCTGTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATTTATATTAGCAGAGAAAAATATAATAATAAAAATCTGTGT  547

seq1  TCCCAAACATTTAAAAATTACTTTCATTGTCATTTCTTTCTTTTTCTTTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACATTTAAAAATTACTTTCATTGTCATTTCTTTCTTTTTCTTTA  597

seq1  AAAAGCCATTTAATATGTACACAAATAGGACTTTATCATATTTCTGCTTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCATTTAATATGTACACAAATAGGACTTTATCATATTTCTGCTTC  647

seq1  TCTCTTTCATGTCCACAAGCATATATCCCCACTTATATGCACAGGAAATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCATGTCCACAAGCATATATCCCCACTTATATGCACAGGAAATG  697

seq1  TACTGAAGTAGCAATGTGGTGCATCTCTGAATAATATTCATTGAGCTAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGTAGCAATGTGGTGCATCTCTGAATAATATTCATTGAGCTAAC  747

seq1  ATAGTCATGGAAGCTAAATTATATATATTCTAGCCTGAATCTTAGGTTAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCATGGAAGCTAAATTATATATATTCTAGCCTGAATCTTAGGTTAC  797

seq1  ATGTGTGCCTTAGGAAAATCTTAGAGTGAAAGAAGTTAGAAATTGAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCCTTAGGAAAATCTTAGAGTGAAAGAAGTTAGAAATTGAAAAA  847

seq1  TGACTCTGAAAGAATACTGGCTGATATTTTCAGCAATTATAGACTAGGAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGAAAGAATACTGGCTGATATTTTCAGCAATTATAGACTAGGAC  897

seq1  ATGATGGTGGCACCTATAGGTAATTGATCACATTGTAAATGATAAAAATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGTGGCACCTATAGGTAATTGATCACATTGTAAATGATAAAAATG  947

seq1  GAACATTAAATCCTTATAAAAATCCTCTATTGATTATTTTTAGATAATAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTAAATCCTTATAAAAATCCTCTATTGATTATTTTTAGATAATAC  997

seq1  AGTACCCAGTAGAATTCTATTGTTATTTCCTGTATTAATTCTCCACCCAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAGTAGAATTCTATTGTTATTTCCTGTATTAATTCTCCACCCAT  1047

seq1  TTCTTTTCTGAAACTAGTGAATGTCTAAATGATTTTGCTTTCATTAGAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTGAAACTAGTGAATGTCTAAATGATTTTGCTTTCATTAGAAT  1097

seq1  TC  1097
      ||
seq2  TC  1099


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