BAC Information

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BAC

Clone NameB6Ng01-198O08
Chromosome3 (Build37)
Map Location 49,768,384 - 49,769,281
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18
Downstream geneLOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O08.bB6Ng01-198O08.g
ACCGA020373GA020374
length942899
definitionB6Ng01-198O08.b B6Ng01-198O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaactagatgatcatgcggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagggagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgtgctttttttggctgggagactattgataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgatttttttaat
taggatttttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttttcaaagaaccaactccctcgtttggttaattcttt
gaataattcttcttgtttccacttggtttgatttcacccctgagtttgat
tatttcctgccgtctactccttcttgggtgatttgcttcctttttttcta
gagcttttggatgtgatgtcaagctgctagtatgtgcctctc
gaattcttctctcatctctttaaatactgactgtctgtttgaatgtcaaa
cagagtgagtgttctatctgtcagggtccttcccaccaaatgcttgcaac
tacactagtacactgggacccagattattcatttcaataactcctgattc
ttatttcctctgcactcacatgtttgaaaacacttggatgtctatcttct
ctcaagggaaagcaactggaaattaaaaccaccactgaataatctataaa
gtttatttaaagaatctaaaaagatgggaaaggaggagaaaaagtgtttt
tggaatttcctgtatgagttgagcagcatgcttgcgctgaagtctttttt
cctgagtacttcagtgaattctgtatctccatgaaaagcaactgacttag
aaagccaatgtgtgtagcctgtcagtggtggtgcacgcctttaatcctag
cacttgggagtcagaggcaggcagatttctgagttcaaggccagcctggt
ctacaaagtgagttccaggacaaccagggctatacaaagaaaccctgtct
tgaaaaacaaaacacaacaaaacaaaacaaaacaaaacaaaacaaacaaa
caaacaaaaaaagccaatgtgtgtgaaatgcttttttcagctttcaaaca
gcctcagagcacttgattttgaaatacaagaaacatgttcacagaactct
acattgagacttcaatatgatttgctataaggaggcaacaacactatgtc
tcccatgttttaatcattattttccataaagaaaatgccttctattaaca
tttgatccaatgttaagatccacttgttaaggtttttgtcttgttttatg
catgtattctccttccttctttccttccttccttccttccttccattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49768384_49769281
seq2: B6Ng01-198O08.g_63_961 (reverse)

seq1  GGAA-GGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAGAATACATGC  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAGAATACATGC  50

seq1  ATAAAACAAGACAAAAACCTTAACAAGTGGATCTTAACATTGGATCAAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAAGACAAAAACCTTAACAAGTGGATCTTAACATTGGATCAAAT  100

seq1  GTTAATAGAAGGCATTTTCTTTATGGAAAATAATGATTAAAACATGGGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGAAGGCATTTTCTTTATGGAAAATAATGATTAAAACATGGGAG  150

seq1  ACATAGTGTTGTTGCCTCCTTATAGCAAATCATATTGAAGTCTCAATGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTGTTGTTGCCTCCTTATAGCAAATCATATTGAAGTCTCAATGTA  200

seq1  GAGTTCTGTGAACATGTTTCTTGTATTTCAAAATCAAGTGCTCTGAGGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGTGAACATGTTTCTTGTATTTCAAAATCAAGTGCTCTGAGGCT  250

seq1  GTTTGAAAGCTGAAAAAAGCATTTCACACACATTGGCTTTTTTTGTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGCTGAAAAAAGCATTTCACACACATTGGCTTTTTTTGTTTGT  300

seq1  TTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTGTGTTTTGTTTTTCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTGTGTTTTGTTTTTCAA  350

seq1  GACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTGGAACTCACTTTGTAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTGGAACTCACTTTGTAGA  400

seq1  CCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGACTCCCAAGTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGACTCCCAAGTGC  450

seq1  TAGGATTAAAGGCGTGCACCACCACTGACAGGCTACACACATTGGCTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTAAAGGCGTGCACCACCACTGACAGGCTACACACATTGGCTTTC  500

seq1  TAAGTCAGTTGCTTTTCATGGAGATACAGAATTCACTGAAGTACTCAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAGTTGCTTTTCATGGAGATACAGAATTCACTGAAGTACTCAGGA  550

seq1  AAAAAGACTTCAGCGCAAGCATGCTGCTCAACTCATACAGGAAATTCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACTTCAGCGCAAGCATGCTGCTCAACTCATACAGGAAATTCCAA  600

seq1  AAACACTTTTTCTCCTCCTTTCCCATCTTTTTAGATTCTTTAAATAAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTTTTCTCCTCCTTTCCCATCTTTTTAGATTCTTTAAATAAACT  650

seq1  TTATAGATTATTCAGTGGTGGTTTTAATTTCCAGTTGCTTTCCCTTGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATTATTCAGTGGTGGTTTTAATTTCCAGTTGCTTTCCCTTGAGA  700

seq1  GAAGATAGACATCCAAGTGTTTTCAAACATGTGAGTGCAGAGGAAATAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGACATCCAAGTGTTTTCAAACATGTGAGTGCAGAGGAAATAAG  750

seq1  AATCAGGAGTTATTGAAATGAATAATCTGGGTCCCAGTGTACTAGTGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGAGTTATTGAAATGAATAATCTGGGTCCCAGTGTACTAGTGTAG  800

seq1  TTGCAAGCATTTGGTGGGAAGGACCCTGACAGATAGAACACTCACTCTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCATTTGGTGGGAAGGACCCTGACAGATAGAACACTCACTCTGT  850

seq1  TTGACATTCAAACAGACAGTCAGTATTTAAAGAGATGAGAGAAGAATTC  898
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTCAAACAGACAGTCAGTATTTAAAGAGATGAGAGAAGAATTC  899