BAC Information

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BAC

Clone NameB6Ng01-199M03
Chromosome3 (Build37)
Map Location 76,622,219 - 76,623,164
singlet/doubletsinglet
Overlap genenone
Upstream geneGolph4, Fstl5
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199M03.bB6Ng01-199M03.g
ACCGA021007GA021008
length1,182950
definitionB6Ng01-199M03.b B6Ng01-199M03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaatatagggatctcaaatattgagaaacacttaagaaatgtt
caacattcttagtcatcatggcaattcaaatcaaaacaacattgagattc
catcttacccttgtaacaatatactagcatcattgtggacaaaagggaac
aagcctgcatttctggtaggaatgcaaatttgcatagtcactatggaaat
caatatggtagttccttagaaaattgggagtcatactccattgtgtaaat
gtaccacattttctgtatccattcctctgttgaggggcatatgggttctt
tccagcttctggctagtataaataaggctgctatgaacatagtggagcat
gtgtccttcttaacggttgggacatcttctggatatatgcccaggagagg
tattgctggatcttccggtagtactatgtccaattttctgaggaaccgcc
agactgatttccagagtggttgtacaagcttgcaatcccaccaacaatgg
aggagtgttcctctttctccacatcctcgccagcatctgctgtcacctga
attttttatcttagccattctgactggtgtgaggtggaatctcagggctg
ttttgatttgcatttccctgatgattaaggatgttgaacattttttcagg
tgcttctctgccattcggtattcctcaggtgagaattctttgttcagttc
tcagccccattttttaatggggttatttgattttctgaagtccaccttct
tgagttctttatatatgttggatattagtcccctatctgatttaggatat
gtaaagatcctttcccaatctgttggtggtctttttgtcttactgacggt
gtcttttgccttgcagaagctttggagtttcatgaggtccatttgtcaat
tctcgatcttacagcacagccattgctgttctattcaggattttttccct
gtgcccatatcttaaagcttttccctactttctcttctgtaagttcagtg
tctctggttttatgtgaagtccttgatcacctcagattgaacttagtaca
gagataggtatggatcgattccatctctacatggataacacttagtgtgc
cacacatttgttgaatgctgcttctccatgaagttagtcttcggaatagg
acctagagtgggtccagtttacaggagctcca

gaattcacttttaatattttctatgaaagagggatattaaatttgactga
tacagcaggggaatgctgtcctgggctgttagttgtaagctagacaaaga
cccattaggagaactcagcatgtctttttgaaataatgcttgttgtttat
tctaaactctgcacatgattttgtctttaccctgcatatccctaagtctt
atcagttgcaatgattgacagtgttcagtactcaatggaaggggttgtat
gactttcttttgtttcaagaacactttttccagcactggagttaatagaa
ccactccttgtattataaaaagctcttagaaatattgtatactaattgtt
tctcagtaatataaaacctatgtgtttccttttggaaatgatagtataat
actacagagccaaattgttttttgttgttgttgttgttgttgttaaaaca
ttagtttttagctatttatttacttctctatctatttttgcagttgtggg
actgatcccaagactgtatgtcacacaatgcaaagacctattaagatata
cactcaacagtttttggtatttatttcttttcccataatctcattgatat
ttgaaatcaatattaataaatttcctggatacaagtattgtagctttgtc
caaagcattacataaacaacacaattaaagtagcacagggtccccatgga
ggaattagagaaagaactgaaggggtttgcaaccccataggaagaacaac
aatatcaaccaaccagatcctccagagctgccaaggactaaaccaccaac
caaagagtacacatggaaggacccatggttccaaccacatatgtagcaaa
ggatggccttgtccggcatcaataggagaagaagcccttggtcctgtgca
agctcccattccccagtgtaaggggaatgcctggggttggtgagatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76622219_76623164
seq2: B6Ng01-199M03.g_66_1015

seq1  GAATTCACTTTTAATATTTTCTATGAAAGAGGGATATTAAATTTGACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTAATATTTTCTATGAAAGAGGGATATTAAATTTGACTGA  50

seq1  TACAGCAGGGGAATGCTGTCCTGGGCTGTTAGTTGTAAGCTAGACAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGGGGAATGCTGTCCTGGGCTGTTAGTTGTAAGCTAGACAAAGA  100

seq1  CCCATTAGGAGAACTCAGCATGTCTTTTTGAAATAATGCTTGTTGTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAGGAGAACTCAGCATGTCTTTTTGAAATAATGCTTGTTGTTTAT  150

seq1  TCTAAACTCTGCACATGATTTTGTCTTTACCCTGCATATCCCTAAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTCTGCACATGATTTTGTCTTTACCCTGCATATCCCTAAGTCTT  200

seq1  ATCAGTTGCAATGATTGACAGTGTTCAGTACTCAATGGAAGGGGTTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTGCAATGATTGACAGTGTTCAGTACTCAATGGAAGGGGTTGTAT  250

seq1  GACTTTCTTTTGTTTCAAGAACACTTTTTCCAGCACTGGAGTTAATAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCTTTTGTTTCAAGAACACTTTTTCCAGCACTGGAGTTAATAGAA  300

seq1  CCACTCCTTGTATTATAAAAAGCTCTTAGAAATATTGTATACTAATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCTTGTATTATAAAAAGCTCTTAGAAATATTGTATACTAATTGTT  350

seq1  TCTCAGTAATATAAAACCTATGTGTTTCCTTTTGGAAATGATAGTATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAATATAAAACCTATGTGTTTCCTTTTGGAAATGATAGTATAAT  400

seq1  ACTACAGAGCCAAATTGTTTTTTGTTGTTGTTGTTGTTGTTGTTAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGAGCCAAATTGTTTTTTGTTGTTGTTGTTGTTGTTGTTAAAACA  450

seq1  TTAGTTTTTAGCTATTTATTTACTTCTCTATCTATTTTTGCAGTTGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTTAGCTATTTATTTACTTCTCTATCTATTTTTGCAGTTGTGGG  500

seq1  ACTGATCCCAAGACTGTATGTCACACAATGCAAAGACCTATTAAGATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCCCAAGACTGTATGTCACACAATGCAAAGACCTATTAAGATATA  550

seq1  CACTCAACAGTTTTTGGTATTTATTTCTTTTCCCATAATCTCATTGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACAGTTTTTGGTATTTATTTCTTTTCCCATAATCTCATTGATAT  600

seq1  TTGAAATCAATATTAATAAATTTCCTGGATACAAGTATTGTAGCTTTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCAATATTAATAAATTTCCTGGATACAAGTATTGTAGCTTTGTC  650

seq1  CAAAGCATTACATAAACAACACAATTAAAGTAGCACAGGGTCCCCATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATTACATAAACAACACAATTAAAGTAGCACAGGGTCCCCATGGA  700

seq1  GGAATTAGAGAAAGAACTGAAGGGGTTTGCAACCCCATAGGAAGAACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAGAGAAAGAACTGAAGGGGTTTGCAACCCCATAGGAAGAACAAC  750

seq1  AATATCAACCAACCAGATCCTCCAGAGCTGCCAAGGACTAAACCACCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAACCAACCAGATCCTCCAGAGCTGCCAAGGACTAAACCACCAAC  800

seq1  CAAAGAGTACACATGGAAGGACCCATGGTTCCAACCACATATGTAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGTACACATGGAAGGACCCATGGTTCCAACCACATATGTAGCAAA  850

seq1  GGATGGCCTTGTCCGGCATCAATAGGAGAAGAAGCCCTTGGTCCTGTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCCTTGTCCGGCATCAATAGGAGAAGAAGCCCTTGGTCCTGTGCA  900

seq1  AGCT-CCATTCCCCAGTGT-AGGGGAATGCC--GGGGTGGTGAGATGGGA  946
      |||| |||||||||||||| |||||||||||  ||| |||||||||||||
seq2  AGCTCCCATTCCCCAGTGTAAGGGGAATGCCTGGGGTTGGTGAGATGGGA  950


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