MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-201H08
Chromosome	3 (Build37)
Map Location	19,272,042 - 19,273,223
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC622921, LOC100040153, Armc1, Mtfr1, Pde7a
Downstream gene	Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC622921 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Armc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74252 MGI:1921502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtfr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67472 MGI:1914722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18583 MGI:1202402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66326 MGI:1913576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	Trim55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665002 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039304 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Cp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12807 MGI:2153839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hltf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gyg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27357 MGI:1351614
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12873 MGI:88479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664965 MGI:3647720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	LOC100040283 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cpb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76703 MGI:1923953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agtr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11608 MGI:87965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Armc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542136 GeneID:74252 MGI:1921502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 1 transcript_id : NM_028840.2

name	Mtfr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363119 GeneID:67472 MGI:1914722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial fission regulator 1 transcript_id : NM_026182.4

name	Pde7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679246 GeneID:18583 MGI:1202402
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 7A transcript_id : NM_008802.1

name	Dnajc5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475999 GeneID:66326 MGI:1913576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : NM_025489.2

name	EG620290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369437 GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : predicted gene, EG620290 transcript_id : XM_884597.2

name	Trim55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486876 GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 55 transcript_id : NM_001081281.1

name	Crh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45429989 GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone transcript_id : NM_205769.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815852 GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_001042611.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347563 GeneID:12870 MGI:88476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_007752.2

name	Hps3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385576 GeneID:12807 MGI:2153839
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 3 homolog (human) transcript_id : NM_080634.3

name	Hltf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67763823 GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase-like transcription factor transcript_id : NM_009210.2

name	Hltf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67763821 GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase-like transcription factor transcript_id : NM_144959.2

name	Gyg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326475 GeneID:27357 MGI:1351614
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycogenin transcript_id : NM_013755.2

name	Cpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680998 GeneID:12873 MGI:88479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A3, mast cell transcript_id : NM_007753.1

name	Cpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56550070 GeneID:76703 MGI:1923953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase B1 (tissue) transcript_id : NM_029706.1

name	Agtr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341262 GeneID:11608 MGI:87965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiotensin II receptor, type 1b transcript_id : NM_175086.2

name	Armc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312676 CCDS:CCDS17255.1 GeneID:74252 MGI:1921502
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : armadillo repeat containing protein product : armadillo repeat-containing protein protein_id : NP_083116.1

name	Mtfr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267450 CCDS:CCDS17256.1 GeneID:67472 MGI:1914722
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : mitochondrial fission regulator 1 protein_id : NP_080458.1

name	Pde7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679247 GeneID:18583 MGI:1202402
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphodiesterase 7A protein_id : NP_032828.1

name	Dnajc5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476000 CCDS:CCDS17257.1 GeneID:66326 MGI:1913576
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein_id : NP_079765.2

name	EG620290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800464 GeneID:620290 MGI:3646012
definition	codon_start : 1 product : similar to bcl-10 protein_id : XP_889690.1

name	Trim55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486877 GeneID:381485 MGI:3036269
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : ring finger protein 29 product : tripartite motif-containing 55 protein_id : NP_001074750.1

name	Crh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45429990 CCDS:CCDS17258.1 GeneID:12918 MGI:88496
definition	GO_process : GO:0006954 - inflammatory response [Evidence IMP] codon_start : 1 note : corticoliberin; corticotropin releasing factor product : corticotropin releasing hormone protein_id : NP_991338.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815853 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : ceruloplasmin isoform a protein_id : NP_001036076.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347564 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : ceruloplasmin isoform b protein_id : NP_031778.2

name	Hps3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560001 CCDS:CCDS17260.1 GeneID:12807 MGI:2153839
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_process : GO:0006996 - organelle organization and biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : cocoa product : Hermansky-Pudlak syndrome 3 homolog protein_id : NP_542365.2

name	Hltf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67763824 CCDS:CCDS17261.1 GeneID:20585 MGI:1196437
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016887 - ATPase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; helicase-like transcription factor-like protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 isoform 1 protein_id : NP_033236.2

name	Hltf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67763822 GeneID:20585 MGI:1196437
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016887 - ATPase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; helicase-like transcription factor-like protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 isoform 2 protein_id : NP_659208.2

name	Gyg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305121 GeneID:27357 MGI:1351614
definition	GO_function : GO:0008466 - glycogenin glucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA]; GO:0005978 - glycogen biosynthesis [Evidence IEA] codon_start : 1 product : glycogenin 1 protein_id : NP_038783.1

name	Cpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680999 CCDS:CCDS17262.1 GeneID:12873 MGI:88479
definition	GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : mast cell carboxypeptidase A product : carboxypeptidase A3, mast cell protein_id : NP_031779.1

name	Cpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56550071 CCDS:CCDS17263.1 GeneID:76703 MGI:1923953
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0050425 - carboxypeptidase B activity [Evidence ISS] GO_process : GO:0006508 - proteolysis [Evidence ISS] [Evidence IEA] codon_start : 1 product : carboxypeptidase B1 protein_id : NP_083982.1

name	Agtr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201972 CCDS:CCDS17264.1 GeneID:11608 MGI:87965
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004947 - bradykinin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IGI]; GO:0002035 - brain renin-angiotensin system [Evidence IMP]; GO:0042756 - drinking behavior [Evidence IGI] [Evidence IMP]; GO:0001822 - kidney development [Evidence IGI]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0001991 - regulation of blood pressure by circulatory renin-angiotensin [Evidence IGI]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : angiotensin receptor 1b protein_id : NP_780295.1

name	LOC622921 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622921
definition	number : 1 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 1 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 2 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 3 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 4 pseudo : _no_value

name	LOC665002 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665002
definition	number : 1 pseudo : _no_value

name	LOC100039304 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039304
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 2 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 3 pseudo : _no_value

name	LOC100040283 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040283
definition	number : 1 pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250841 GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : RIKEN cDNA 4632415L05 gene transcript_id : XR_035234.1

name	EG664965 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369442 GeneID:664965 MGI:3647720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : predicted gene, EG664965 pseudo : _no_value transcript_id : XR_001700.1

clone name	MSMg01-177I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-337P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543P12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-179E18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-201H08.b	B6Ng01-201H08.g
ACC	GA022222	GA022223
length	1,240	1,182
definition	B6Ng01-201H08.b	B6Ng01-201H08.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttaaaggggcagagaggaataggaatattagaaacttggttag acttaagaaagctagctttagcatctgttatccagtctctgtatgcttag aaggctcagggcttgactgaagttctgactggatccatctgaaaagttgg atgaggccaaatgatctggaatcaggagcaattctaaagctgttctggaa acaagtgtctggatagcatcaagagcaggaggctgaacagcaggtcagtt cagtatctttgaggataaatcttgtcaaagttgtacattttgtaatatat gattctcacaaccaaaattttagaacctttaagatttttgtatggattgt gcaggatgcacagatcagataaggatggatttttttgtttgtttgagcag gtgaaaaaaactgttttgttattaattaatttctcggtaaccatttgtaa taattcttcatttatgccttatgaaggagggcacaaagaatcttaaagat tccataaccaataagatttattgactcattttagctgaagttttggctag agacatttttatgtctaagccagtttctgggctgtttctatatccaggaa tcagtagatcaatttacctgtcttgcttgattttctcaaaaatttttgag atcttcaggtggccttcctctgtcatatctgatccatattactctgaaag ggatccagagccttttctcctatcctgtcaacacaaaacagatactttct cccaaaatagcatgttcttggtccagtaactggaaaccattgagggtata gcttgacctagctctcagaggaactttaacataaccaccaaactcataac cacactcatttttgataataaaaacaattcagggctggtgagatggctca gtgggtaagagcacctgactgctcttccaaaggtccagagttcaaatccc agccaaccacatggtggctcacaaccatctgtaatgagatctgactcatc ttcttgggaatgtcttgacgacagctacaggtgtacctacatataataat agtcatcctttaaaaaaaacaattcaaaagcataaagtcattgtaaacaa ttagtatcctgttggggtaacagtggcttctactgtccctgggccaatct tcatggaagagaccaagcctcattatttatcatctgtggttaactctaga tgtgacacccactgctggagatatattccatcactgctgc	gaattcagagaggcagcatggggattgagtttctaggagctttaagttga taggagccatttttaaaaactacacaatgccaggcagtggtggcacacac ctttaatcccagcactcagaaggcagaggcaggtggatttctgagttcaa ggccagcctggtctaaaaaatgagttccaggacagccagggctacacaga gaaaccctgtctcataaaaccaaaaaacaaacaaacaaaaaacaaaaacc aaaaaagaaaaaaaaaaacaagaaaacaaaaacaaaaaaagtacacaact tcctttctatctttttgcattgttattatttttattctggtaacatggtg acagtctgaaatttgaaactttacaaggcagtaaaatatatttgaactgt cagataatttaggctaagtaaaccctatacacaaatatgtaattaggtga attactgctattgctgttggaatgtaactcctcatccagtaaaagctaaa ggtgtgccccaattaatgtcttttaaatatgtgatgatgcttgtataatt atgatgctgtaattatattcacatggatttgtggttcttgggagggaaca catagctgtagaagatatactgctgctgaaatgattttcactgtttattt atgatacagtatgttttactcagacagtgttaacagtcagataaagtgaa ctgttgatagaattgttgaaaatgtttactacactataagttgcttctgt tactagaaaatccacatttgttacattctgctgaaaaagtgttttttcac aagttaggtggtgtactgggctagttttgtgtcaacttgacacaggctgg agttatcacagagaaagggagcttcagttggggaaatgcctccacaagat ccagctgcaaggcattttctcaattagtgatccagggagggagttcccct tgtggggtggtagtcttgggttctatgcaggctgagctagtcagggaaat gcaagccagttaagaacatccttcaatgcctctgcatcaactcctgcctt tctgacctgctgggttgccagacctgactttctgtgatgatcagaagtat ggaagtgtaagcttgattaccctttttgtccacacctgtgctctagactt gaatttgtgcgggaaatgagacttgactaaga
quality values	Open. Hide. 47 47 27 33 62 62 54 62 62 40 36 31 56 62 62 47 56 56 56 49 44 35 62 62 62 43 43 62 59 62 62 51 59 44 26 29 27 25 33 34 56 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 59 59 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 38 62 62 62 62 62 62 62 62 58 58 54 58 58 58 54 45 58 58 58 58 58 58 54 58 58 58 58 58 45 42 54 49 54 58 58 42 52 52 58 58 58 58 45 49 58 58 58 58 45 39 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 54 51 58 54 58 58 54 39 58 58 58 51 42 58 51 54 58 58 40 51 50 51 58 58 51 58 54 50 58 58 58 58 51 58 58 58 58 52 58 54 58 49 49 58 58 53 58 58 51 40 58 58 58 38 39 58 58 54 58 58 58 53 54 49 52 54 58 49 21 34 58 53 44 36 32 51 51 54 53 46 53 53 52 58 51 50 35 51 53 51 51 50 54 53 38 50 47 31 52 51 44 23 50 39 54 53 49 41 51 58 40 34 58 50 28 26 37 49 37 51 58 32 52 52 51 58 58 50 45 45 49 40 47 41 44 35 39 52 53 39 41 29 53 49 37 52 39 33 25 35 49 34 30 26 33 30 42 32 54 52 52 49 39 54 24 28 49 44 16 31 37 28 52 42 34 49 20 37 42 31 54 49 51 28 53 40 40 32 39 20 35 40 38 37 54 44 54 19 26 53 37 51 37 53 53 17 54 54 34 34 35 33 34 45 53 31 42 21 16 52 40 39 33 45 40 45 34 34 37 30 47 35 36 40 41 34 34 53 53 23 45 32 26 39 21 20 27 33 30 31 35 25 51 51 30 31 32 28 31 31 26 29 27 14 38 23 35 42 32 26 29 51 51 51 17 16 31 21 9 20 32 31 51 40 40 28 31 21 30 38 23 38 27 13 46 25 31 25 15 33 30 35 31 18 25 18 21 41 29 38 31 26 27 31 31 46 35 12 13 32 25 37 11 30 13 18 26 11 24 30 25 21 27 25 31 31 24 36 16 31 29 38 30 23 44 31 25 33 19 11 41 17 9 19 22 14 39 22 25 28 48 32 25 18 17 14 29 11 31 37 20 17 6 25 36 38 11 13 33 16 28 25 6 6 13 21 21 32 27 31 11 11 26 13 11 18 18 25 13 9 18 25 21 23 32 34 24 25 44 15 14 31 33 13 12 5 7 22 48 10 29 33 11 34 24 15 8 11 21 33 19 25 11 25 21 21 24 21 22 34 8 6 11 11 26 24 10 7 8 39 17 16 5 7 5 11 23 19 13 20 17 9 4 3 6 3 3 4 10 19 28 29 15 15 38 32 21 18 30 28 11 4 4 9 27 27 24 13 26 25 21 20 13 15 5 5 30 15 8 4 6 29 16 9 11 18 8 38 18 13 6 15 4 11 7 7 7 6 6 7 11 12 11 7 9 7 4 6 8 7 8 4 6 10 11 5 12 5 12 9 9 7 6 5 9 5 6 5 10 14 16 9 3 4 4 8 7 6 12 7 7 2 3 6 4 5 11 5 5 3 5 10 5 8 8 11 10 7 3 3 1 5 5 6 7 7 5 9 12 4 10 5 7 4 5 6 5 6 3 7 8 4 5 13 10 8 6 5 16 17 10 6 4 6 7 21 7 7 4 15 16 5 3 2 1 4 4 5 7 6 6 6 11 7 4 3 6 4 2 3 3 6 5 3 4 7 18 5 10 14 14 3	Open. Hide. 62 35 56 47 62 59 59 51 62 44 43 43 46 50 27 27 28 27 50 59 62 54 62 59 59 62 62 62 62 62 62 62 62 59 59 62 54 54 59 62 62 62 59 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 54 54 49 49 62 59 59 56 56 62 62 62 59 62 62 59 62 62 59 59 62 62 59 59 56 62 59 59 59 54 54 62 62 62 62 59 59 62 59 62 59 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 54 56 59 56 46 54 40 54 62 59 59 59 59 59 59 56 59 62 62 59 62 56 43 43 54 59 59 49 50 50 48 50 56 59 59 56 54 43 48 59 56 62 59 59 59 59 59 62 62 59 59 62 54 56 62 62 59 56 54 56 56 62 59 62 62 62 62 56 62 62 59 62 56 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 51 51 62 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 45 62 62 62 62 52 62 62 62 62 52 62 62 51 62 62 62 62 62 62 62 62 62 62 54 46 58 58 58 54 58 54 58 58 54 58 58 58 41 41 58 58 54 58 58 58 58 58 58 58 54 58 58 58 45 54 54 58 58 54 58 52 58 54 58 48 58 58 58 58 54 58 58 43 47 54 54 54 58 58 58 50 48 52 58 58 58 42 49 58 58 58 54 58 45 38 58 58 58 58 58 47 47 58 38 41 39 58 51 35 50 49 50 54 58 53 54 58 51 50 47 34 58 58 46 58 31 53 52 51 51 51 58 51 58 58 49 58 51 58 58 54 50 58 50 41 58 58 58 50 46 51 46 58 37 58 50 53 53 58 53 53 47 40 54 46 53 53 53 52 38 39 37 58 40 58 58 53 51 46 53 53 39 49 58 42 41 53 42 58 46 52 50 53 53 34 52 37 52 50 31 52 39 58 58 58 39 50 53 53 54 45 42 54 24 54 50 49 29 52 42 51 54 32 53 51 38 38 37 53 54 54 53 32 51 21 54 32 25 35 35 42 37 33 53 53 42 39 39 52 40 51 54 39 44 28 25 47 26 51 41 25 30 37 30 26 29 54 54 54 45 33 53 38 30 30 37 53 54 47 53 41 30 22 30 16 34 45 40 34 45 32 45 40 53 52 47 47 34 31 31 32 15 52 52 47 40 40 34 22 33 29 31 22 15 32 33 29 45 15 27 28 15 46 20 21 28 30 27 46 12 16 30 31 21 16 51 51 48 22 19 31 24 34 25 28 42 31 35 31 31 28 16 31 26 10 51 26 36 28 30 26 8 29 26 30 34 31 29 31 31 14 41 16 31 46 44 16 46 13 30 16 42 31 26 36 28 18 33 30 33 46 46 16 43 46 31 29 35 37 32 31 27 38 16 26 23 27 20 25 18 37 11 12 27 32 31 32 27 22 11 19 33 18 11 11 48 48 37 31 30 27 16 17 33 8 7 19 16 28 23 11 6 11 44 10 41 21 23 29 44 16 20 8 6 24 31 48 48 23 31 20 33 8 7 24 21 25 18 18 33 20 29 19 31 32 20 15 11 48 16 33 16 34 22 26 21 21 24 15 10 24 19 17 24 32 17 24 9 19 8 15 21 7 7 34 19 10 25 28 5 8 9 7 11 7 7 18 12 8 9 7 15 11 12 25 21 15 5 11 23 20 14 17 13 6 13 14 10 18 19 6 14 20 15 11 20 27 28 13 14 21 21 17 29 16 28 12 10 30 33 10 18 16 20 27 12 19 18 28 14 30 11 40 25 5 13 9 5 13 6 5 17 11 11 6 6 29 9 5 19 9 7 3 5 5 9 21 14 10 23 15 9 4 4 6 9 7 6 4 11 9 6 14 16 7 4 6 7 11 14 10 7 9 9 5 20 4 4 20 8 16 12 7 17 16 24 13 4 1 4 3 5 7 22 6 6 9 7 4 6 4 9 5 6 1 3 3 2 4 4 14 8 6 6 22 10 5 4 5 13 11 14 5 7 10 8 7 6 6 5 3 3 2 3 5 14 5 8 6 6 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_19272042_19273223
seq2: B6Ng01-201H08.g_68_1249

seq1  GAATTCAGAGAGGCAGCATGGGGATTGAGTTTCTAGGAGCTTTAAGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGGCAGCATGGGGATTGAGTTTCTAGGAGCTTTAAGTTGA  50

seq1  TAGGAGCCATTTTTAAAAACTACACAATGCCAGGCAGTGGTGGCACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCATTTTTAAAAACTACACAATGCCAGGCAGTGGTGGCACACAC  100

seq1  CTTTAATCCCAGCACTCAGAAGGCAGAGGCAGGTGGATTTCTGAGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGCACTCAGAAGGCAGAGGCAGGTGGATTTCTGAGTTCAA  150

seq1  GGCCAGCCTGGTCTAAAAAATGAGTTCCAGGACAGCCAGGGCTACACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTAAAAAATGAGTTCCAGGACAGCCAGGGCTACACAGA  200

seq1  GAAACCCTGTCTCATAAAACCAAAAAACAAACAAACAAAAAACAAAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCTCATAAAACCAAAAAACAAACAAACAAAAAACAAAAACC  250

seq1  AAAAAAGAAAAAAAAAAACAAGAAAACAAAAACAAAAAAAGTACACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAAAAAAAACAAGAAAACAAAAACAAAAAAAGTACACAACT  300

seq1  TCCTTTCTATCTTTTTGCATTGTTATTATTTTTATTCTGGTAACATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTATCTTTTTGCATTGTTATTATTTTTATTCTGGTAACATGGTG  350

seq1  ACAGTCTGAAATTTGAAACTTTACAAGGCAGTAAAATATATTTGAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGAAATTTGAAACTTTACAAGGCAGTAAAATATATTTGAACTGT  400

seq1  CAGATAATTTAGGCTAAGTAAACCCTATACACAAATATGTAATTAGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATTTAGGCTAAGTAAACCCTATACACAAATATGTAATTAGGTGA  450

seq1  ATTACTGCTATTGCTGTTGGAATGTAACTCCTCATCCAGTAAAAGCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCTATTGCTGTTGGAATGTAACTCCTCATCCAGTAAAAGCTAAA  500

seq1  GGTGTGCCCCAATTAATGTCTTTTAAATATGTGATGATGCTTGTATAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCCCCAATTAATGTCTTTTAAATATGTGATGATGCTTGTATAATT  550

seq1  ATGATGCTGTAATTATATTCACATGGATTTGTGGTTCTTGGGAGGGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTGTAATTATATTCACATGGATTTGTGGTTCTTGGGAGGGAACA  600

seq1  CATAGCTGTAGAAGATATACTGCTGCTGAAATGATTTTCACTGTTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTGTAGAAGATATACTGCTGCTGAAATGATTTTCACTGTTTATTT  650

seq1  ATGATACAGTATGTTTTACTCAGACAGTGTTAACAGTCAGATAAAGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAGTATGTTTTACTCAGACAGTGTTAACAGTCAGATAAAGTGAA  700

seq1  CTGTTGATAGAATTGTTGAAAATGTTTACTACACTATAAGTTGCTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGATAGAATTGTTGAAAATGTTTACTACACTATAAGTTGCTTCTGT  750

seq1  TACTAGAAAATCCACATTTGTTACATTCTGCTGAAAAAGTGTTTTTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAAAATCCACATTTGTTACATTCTGCTGAAAAAGTGTTTTTTCAC  800

seq1  AAGTTAGGTGGTGTACT-GGCTAGTTTTGTGTCAACTTGACACAGGCTGG  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGTTAGGTGGTGTACTGGGCTAGTTTTGTGTCAACTTGACACAGGCTGG  850

seq1  AGTTATCACAGAGAAA-GGAGCTTCAGTTGGGGAAATGCCTCCACAAGAT  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTATCACAGAGAAAGGGAGCTTCAGTTGGGGAAATGCCTCCACAAGAT  900

seq1  CCAGCTGCAAGGCATTTTCTCAATTAGTGAT-CAAGGAGGGAGTTCCCCT  947
      ||||||||||||||||||||||||||||||| || |||||||||||||||
seq2  CCAGCTGCAAGGCATTTTCTCAATTAGTGATCCAGGGAGGGAGTTCCCCT  950

seq1  TGT-GGGTGGTAGTCTT-GGTTCTATGCAGGCTGAGCAAGTCAGGGAAA-  994
      ||| ||||||||||||| ||||||||||||||||||| ||||||||||| 
seq2  TGTGGGGTGGTAGTCTTGGGTTCTATGCAGGCTGAGCTAGTCAGGGAAAT  1000

seq1  GCAAGCCAGTAAAGAACATCCTTCCATGCCCTCTGCATCAACTCCTG-CT  1043
      |||||||||| ||||||||||||| ||| |||||||||||||||||| ||
seq2  GCAAGCCAGTTAAGAACATCCTTCAATG-CCTCTGCATCAACTCCTGCCT  1049

seq1  TTCTGACCTGCTTGGGTTG-CAGACCTGACTTCCTTGGTGATGATCAGAA  1092
      ||||||||||| ||||||| |||||||||||| ||  |||||||||||||
seq2  TTCTGACCTGC-TGGGTTGCCAGACCTGACTTTCT--GTGATGATCAGAA  1096

seq1  GTATGAAAGTGTAAGCTGAATAAACCCTTTTGCTCCACAACT-TGCTTCT  1141
      ||||| |||||||||||  ||  ||||||||  |||||| || ||||   
seq2  GTATGGAAGTGTAAGCTTGAT-TACCCTTTTTGTCCACACCTGTGCT--C  1143

seq1  TGGTCCTGATATTTGTGCGGGAATAGAAACCCTGACTAAGA  1182
      | | | ||| |||||||||||||  || | | |||||||||
seq2  TAGACTTGA-ATTTGTGCGGGAAATGAGA-CTTGACTAAGA  1182

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information