BAC Information

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BAC

Clone NameB6Ng01-201L19
Chromosome3 (Build37)
Map Location 71,584,488 - 71,670,534
singlet/doubletdoublet
Overlap geneLOC667385
Upstream geneEG625901, EG667377
Downstream geneLOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201L19.bB6Ng01-201L19.g
ACCGA022426GA022427
length3021,108
definitionB6Ng01-201L19.b B6Ng01-201L19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,584,488 - 71,584,789)(71,669,423 - 71,670,534)
sequence
ccacattaattcccaaagctgctggactgatttaaattctttgtatttta
ctgtacatcaattaccataaaataagtgtttgatctatttacaatagttt
taaaaagtcatgtataagtgggtcagaaatgtcatacagcctttagatga
acaaatatcttacatatagaaaagaagaatgttgcactatatgtgagaga
taaaaatgtatgcatagatcttcgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtttaaaaaaagtggtagggaatgaaaaaagaaatatatga
aa

gaattcattgaggatcttacttagtaataaacagcattcaccagtgaaaa
cagatgacatttgtgttttatattatgacagtatatttattattctttat
ttattgattttttattttttatgaagttgcataattttaaagattgtgtg
catttcacatacatcttggaagttagagaagactgttagagtttttctcc
acactggaaaaatatatatagtagtaaccctctcttcattctgatattgg
tggttatggagactggaagcccatgcagttacacagtaggtctctaattg
gtgtaggtctgtttgtgtgtgttatataccttcaagaggtataactctgt
tggcgatagatttttggttttggacagacttgttgcacatactgctttac
ttttcagctatattcatataaaatgtgatcagaatcttcctgctctggcc
actatgtctttttaatccatgaagattctataattttgaatatttcagtc
aacatgaactctttctttttatgttacttttagtcattttatagcataat
aggcaagacaaaaagaatttctcatcttgcattacattgcaaatagcaga
catacatatatcatctaaagctatggctattgtattcaaatgtttttcct
gttcaattttatcttccttgaaatatcacgtgttaatactgactatatga
actgcaaaaaaaaaagttgcaatgatacagttgaagttgtcctaatgtta
gtaatccaagcaaaattaaccgaagcacctgaactttaatgaataagatg
aaatggcactgttttgaatcaagaaagaataaagatctctacaataatta
gggttgtcagcatttcaaaacatctattttgaaaagagaagagactttgg
gcaccagttcatctggatgttaatgaatatggtcctttgaaagaggaatt
agtctctctctttttttttcttgcagctaattaaagaacagttgttaaat
gccacatctgttgttataagcatatgggtttagatttaagcttgcacaga
tcagacgtatttcagtactattatgtgctactgatattgggtggctttat
ctattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71584488_71584789
seq2: B6Ng01-201L19.b_47_348

seq1  CCACATTAATTCCCAAAGCTGCTGGACTGATTTAAATTCTTTGTATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTAATTCCCAAAGCTGCTGGACTGATTTAAATTCTTTGTATTTTA  50

seq1  CTGTACATCAATTACCATAAAATAAGTGTTTGATCTATTTACAATAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATCAATTACCATAAAATAAGTGTTTGATCTATTTACAATAGTTT  100

seq1  TAAAAAGTCATGTATAAGTGGGTCAGAAATGTCATACAGCCTTTAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTCATGTATAAGTGGGTCAGAAATGTCATACAGCCTTTAGATGA  150

seq1  ACAAATATCTTACATATAGAAAAGAAGAATGTTGCACTATATGTGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATCTTACATATAGAAAAGAAGAATGTTGCACTATATGTGAGAGA  200

seq1  TAAAAATGTATGCATAGATCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTATGCATAGATCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTG  250

seq1  TGTGTGTGTGTTTAAAAAAAGTGGTAGGGAATGAAGAAAGAAAGAGATGA  300
      ||||||||||||||||||||||||||||||||||| ||||||| | ||||
seq2  TGTGTGTGTGTTTAAAAAAAGTGGTAGGGAATGAAAAAAGAAATATATGA  300

seq1  AA  302
      ||
seq2  AA  302


seq1: chr3_71669423_71670534
seq2: B6Ng01-201L19.g_64_1171 (reverse)

seq1  AAAAATAGATAAAGCCACCATTAATTCAAGTAGCAACAT-ATAGTACTGA  49
      |||||||||||||||||||   |||   |||||| |||| ||||||||||
seq2  AAAAATAGATAAAGCCACC--CAATATCAGTAGC-ACATAATAGTACTGA  47

seq1  AATACGTCTGATCTGTGCAAGCTTAAATCTTAAAACCATATGCTTTATTA  99
      ||||||||||||||||||||||||||||| |||| ||||||||||   ||
seq2  AATACGTCTGATCTGTGCAAGCTTAAATC-TAAACCCATATGCTT--ATA  94

seq1  ACAACAGATGTGGCATTTAACAACTGTTCTTTAATTAGCTGCAAG-AAAA  148
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACAACAGATGTGGCATTTAACAACTGTTCTTTAATTAGCTGCAAGAAAAA  144

seq1  AAAAGAGAGAGACTAATTCCTCTTTCAAAGGACCATATTCATTAACATCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGAGACTAATTCCTCTTTCAAAGGACCATATTCATTAACATCC  194

seq1  AGATGAACTGGTGCCCAAAGTCTCTTCTCTTTTCAAAATAGATGTTTTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAACTGGTGCCCAAAGTCTCTTCTCTTTTCAAAATAGATGTTTTGA  244

seq1  AATGCTGACAACCCTAATTATTGTAGAGATCTTTATTCTTTCTTGATTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGACAACCCTAATTATTGTAGAGATCTTTATTCTTTCTTGATTCA  294

seq1  AAACAGTGCCATTTCATCTTATTCATTAAAGTTCAGGTGCTTCGGTTAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGCCATTTCATCTTATTCATTAAAGTTCAGGTGCTTCGGTTAAT  344

seq1  TTTGCTTGGATTACTAACATTAGGACAACTTCAACTGTATCATTGCAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGGATTACTAACATTAGGACAACTTCAACTGTATCATTGCAACT  394

seq1  TTTTTTTTTGCAGTTCATATAGTCAGTATTAACACGTGATATTTCAAGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGCAGTTCATATAGTCAGTATTAACACGTGATATTTCAAGGA  444

seq1  AGATAAAATTGAACAGGAAAAACATTTGAATACAATAGCCATAGCTTTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAATTGAACAGGAAAAACATTTGAATACAATAGCCATAGCTTTAG  494

seq1  ATGATATATGTATGTCTGCTATTTGCAATGTAATGCAAGATGAGAAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATATGTATGTCTGCTATTTGCAATGTAATGCAAGATGAGAAATTC  544

seq1  TTTTTGTCTTGCCTATTATGCTATAAAATGACTAAAAGTAACATAAAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTTGCCTATTATGCTATAAAATGACTAAAAGTAACATAAAAAG  594

seq1  AAAGAGTTCATGTTGACTGAAATATTCAAAATTATAGAATCTTCATGGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTCATGTTGACTGAAATATTCAAAATTATAGAATCTTCATGGAT  644

seq1  TAAAAAGACATAGTGGCCAGAGCAGGAAGATTCTGATCACATTTTATATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGACATAGTGGCCAGAGCAGGAAGATTCTGATCACATTTTATATG  694

seq1  AATATAGCTGAAAAGTAAAGCAGTATGTGCAACAAGTCTGTCCAAAACCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCTGAAAAGTAAAGCAGTATGTGCAACAAGTCTGTCCAAAACCA  744

seq1  AAAATCTATCGCCAACAGAGTTATACCTCTTGAAGGTATATAACACACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATCGCCAACAGAGTTATACCTCTTGAAGGTATATAACACACAC  794

seq1  AAACAGACCTACACCAATTAGAGACCTACTGTGTAACTGCATGGGCTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACCTACACCAATTAGAGACCTACTGTGTAACTGCATGGGCTTCC  844

seq1  AGTCTCCATAACCACCAATATCAGAATGAAGAGAGGGTTACTACTATATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCATAACCACCAATATCAGAATGAAGAGAGGGTTACTACTATATA  894

seq1  TATTTTTCCAGTGTGGAGAAAAACTCTAACAGTCTTCTCTAACTTCCAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCCAGTGTGGAGAAAAACTCTAACAGTCTTCTCTAACTTCCAAG  944

seq1  ATGTATGTGAAATGCACACAATCTTTAAAATTATGCAACTTCATAAAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAAATGCACACAATCTTTAAAATTATGCAACTTCATAAAAAA  994

seq1  TAAAAAATCAATAAATAAAGAATAATAAATATACTGTCATAATATAAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATCAATAAATAAAGAATAATAAATATACTGTCATAATATAAAAC  1044

seq1  ACAAATGTCATCTGTTTTCACTGGTGAATGCTGTTTATTACTAAGTAAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTCATCTGTTTTCACTGGTGAATGCTGTTTATTACTAAGTAAGA  1094

seq1  TCCTCAATGAATTC  1112
      ||||||||||||||
seq2  TCCTCAATGAATTC  1108


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