BAC Information

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BAC

Clone NameB6Ng01-201L22
Chromosome3 (Build37)
Map Location 19,114,935 - 19,116,042
singlet/doubletsinglet
Overlap geneMtfr1
Upstream geneCyp7b1, LOC622921, LOC100040153, Armc1
Downstream genePde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201L22.bB6Ng01-201L22.g
ACCGA022430GA022431
length1,2001,101
definitionB6Ng01-201L22.b B6Ng01-201L22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggattgaaagcaagcatatttacatactgagtcttttcaacag
tcctgttatcctaacttcctatttccattagattttttccatcagcatat
tgatttctttcatctgtagcccacttctccctccaaccactgccccaggt
ttttgaccccttctaaacgctttctatattgatgtttcttccatttttat
atactgatgtttctaactcctctggaacaatacacagtagtaactgatct
gactggttgcctggggcctggaagcaacaaagctgaaaattcagactaga
tgatctggtgtgacggttggtcttgattgtatcaactttatgggattcag
actcacctaggaagcacaattctgagtgtgtctgtgagtacagttacaaa
ttaaatgactggtaatattggcccttagaatgtgtgtcatctgccagaga
tccacccagatataaagaggtctgagggaaaagcagtgcttcctgcctgc
ccttgctcatgttgttggtgaacagatcaatattagtttgccttctattt
caataaaaaaaaaagattaaacaccatgaccaaaagtaagttgtgataaa
tggatttatttggtttacataactcatcacagttcatcactgagagaagt
catggcaagaacataagaagggcagcaacctggaggcaggaactgaagca
gagcccatggaggatgctgtttactgacttgcttctcctgggttgcccga
tttgctttcttatataccccacgaccacctgcccagagagggcaccatcc
tcagtgaaatggtcccttctacaccaatcatcagtcaagaaaaggcctcc
tcaaagttgcctactgaccagtgtggtagacgccttttttttctattgga
ttccctcttctcagatgactctagcttgtctcatgttgccaaaataaact
aaccaacacatttgagccctttacaacgtgacataaaaattaatctctat
caaccataaactttcccttttttgttgtccctatatttcatggtaatatc
aatatcgcaatattaaagtatagttataggcttaaagtcacagtcttaca
cattttaaaccacctttcaaaggttcaatcttttgaaaattcaagcttca
attccagagtcttcaattcgatcttgtgtcagaaaaacttacataatcta

gaattcttgcattttgaagcattcccagcgactggcatgtccgacttcag
ggagcagtgtttccagtgttcagactttgacagtgtgggcttgagagaaa
tgacattaacgattcccctctcctttcggcttctgggatgtggttggatt
acatggttcccatatttcttgtttgatgtgcttagtcaaacacaggaatt
gctggtactagaaggcaaagccaggaccctacagaagggctcagacattc
tcggtttgagcttcccggtggttatgattagattgcaatttggaagatga
aattttttaggtgaagacaaaaacaaaagaaaacaaaacaaaaccaatcg
gcagcctttcctcttgacagtggtggaggagcaacaggctctgtagacag
gaaaggagtggggcagtgctggcatacagctggggaatagtgacttgtgt
gataccctgatgagcagtgtgtaggtgtctgtctattcaggtctccttca
cagcctgtgatggccacctttatgctttccttgcagggcagaagtcagtt
ccaagcctcctcatgaggatgaccctccttgctttgagaagcccccaagc
aggcacacttccttcccaagcctgtctcaagacaagccttctccagagag
gacgctggccagcgaggaggccctgcagaagatctctgcccttgagaatg
agcttgctgcccttagagctcagattgccaagattgtgaccctgcaggag
caacagagtccaagtgcaggtatgtggcccctgaagtggcttgttgtgac
tggacagtgcaagctgtgtcttctctagtcttgcctaagacagcacaaaa
cccgatgatgtctgtgtgactttaatttgagaagagtagggaaaaaatct
gcttggcaaactctgaatgcctgcatttgaagtggctgttgtgaatggct
gctttatgggaagtttagattcctccatctgataccactcctctcagaca
cgagatgtacgtgactttgtgttctggtgaaagactgtttctggtagact
tggtgaaaaggctatttacacatgcaaggactggaggtaacatctgatgg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19114935_19116042
seq2: B6Ng01-201L22.g_65_1165

seq1  GAATTCTTGCATTTTGAAGCATTCCCAGCGACTGGCATGTCCGACTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCATTTTGAAGCATTCCCAGCGACTGGCATGTCCGACTTCAG  50

seq1  GGAGCAGTGTTTCCAGTGTTCAGACTTTGACAGTGTGGGCTTGAGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTGTTTCCAGTGTTCAGACTTTGACAGTGTGGGCTTGAGAGAAA  100

seq1  TGACATTAACGATTCCCCTCTCCTTTCGGCTTCTGGGATGTGGTTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTAACGATTCCCCTCTCCTTTCGGCTTCTGGGATGTGGTTGGATT  150

seq1  ACATGGTTCCCATATTTCTTGTTTGATGTGCTTAGTCAAACACAGGAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTCCCATATTTCTTGTTTGATGTGCTTAGTCAAACACAGGAATT  200

seq1  GCTGGTACTAGAAGGCAAAGCCAGGACCCTACAGAAGGGCTCAGACATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACTAGAAGGCAAAGCCAGGACCCTACAGAAGGGCTCAGACATTC  250

seq1  TCGGTTTGAGCTTCCCGGTGGTTATGATTAGATTGCAATTTGGAAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTTGAGCTTCCCGGTGGTTATGATTAGATTGCAATTTGGAAGATGA  300

seq1  AATTTTTTAGGTGAAGACAAAAACAAAAGAAAACAAAACAAAACCAATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTAGGTGAAGACAAAAACAAAAGAAAACAAAACAAAACCAATCG  350

seq1  GCAGCCTTTCCTCTTGACAGTGGTGGAGGAGCAACAGGCTCTGTAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTTCCTCTTGACAGTGGTGGAGGAGCAACAGGCTCTGTAGACAG  400

seq1  GAAAGGAGTGGGGCAGTGCTGGCATACAGCTGGGGAATAGTGACTTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGTGGGGCAGTGCTGGCATACAGCTGGGGAATAGTGACTTGTGT  450

seq1  GATACCCTGATGAGCAGTGTGTAGGTGTCTGTCTATTCAGGTCTCCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCTGATGAGCAGTGTGTAGGTGTCTGTCTATTCAGGTCTCCTTCA  500

seq1  CAGCCTGTGATGGCCACCTTTATGCTTTCCTTGCAGGGCAGAAGTCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTGATGGCCACCTTTATGCTTTCCTTGCAGGGCAGAAGTCAGTT  550

seq1  CCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAAGC  600

seq1  AGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAGAG  650

seq1  GACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGAATG  700

seq1  AGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGGAG  750

seq1  CAACAGAGTCCAAGTGCAGGTATGTGGCCCCTGAAGTGGCTTGTTGTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGTCCAAGTGCAGGTATGTGGCCCCTGAAGTGGCTTGTTGTGAC  800

seq1  TGGACAGTGCAAGCTGTGTCTTCTCTAGTCTTGCCTAAGACAGCACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTGCAAGCTGTGTCTTCTCTAGTCTTGCCTAAGACAGCACAAAA  850

seq1  CCCGATGATGTCTGTGTGACTTTAATTTGAGAAGAGTAGGGAAAAAAATC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCGATGATGTCTGTGTGACTTTAATTTGAGAAGAGTAGGG-AAAAAATC  899

seq1  TGCTTGGCAAACTCTGAAATGCCTGCATTTGAAGTGGGCTGTTGTGAATG  950
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  TGCTTGGCAAACTCTG-AATGCCTGCATTTGAAGT-GGCTGTTGTGAATG  947

seq1  GCTGCTTTATGGGAAGTTTAGATTCCCCCATCTGATAACCACTCCTCTCA  1000
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  GCTGCTTTATGGGAAGTTTAGATTCCTCCATCTGAT-ACCACTCCTCTCA  996

seq1  GACACGAGGATGTAACGTGACTTTGTG-TCTGGTGAAAGGAACTGTTTCT  1049
      ||||||| ||||| ||||||||||||| |||||||||||  |||||||||
seq2  GACACGA-GATGT-ACGTGACTTTGTGTTCTGGTGAAAG--ACTGTTTCT  1042

seq1  GGGTAGGACTT-GTGAGAA-GCTATTTACACATGCAGGGCCT-GAGGTAA  1096
       |||| ||||| |||| || |||||||||||||||| || || ||||| |
seq2  -GGTA-GACTTGGTGAAAAGGCTATTTACACATGCAAGGACTGGAGGT-A  1089

seq1  ACATCTGATGGT  1108
      ||||||||||||
seq2  ACATCTGATGGT  1101