BAC Information

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BAC

Clone NameB6Ng01-201L24
Chromosome3 (Build37)
Map Location 19,114,935 - 19,115,997
singlet/doubletsinglet
Overlap geneMtfr1
Upstream geneCyp7b1, LOC622921, LOC100040153, Armc1
Downstream genePde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201L24.g
ACCGA022434
length1,067
definitionB6Ng01-201L24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgcattttgaagcattcccatcgactggttgtccgacttcagg
gaacaacggttccattgtacgcactatgactttggggggaagagaaaaat
gacatgaaccattcccctctcctttcggctttttacatgtggatggatta
ctaggttcccgtttgccttgattgacgtgcttaagattaccttagatttg
ttggtactaaagggatttaccatgaccctaatctttggctcatacattct
ctgatgaagctcttggggacccatactctgttgcaaatatgaagaggctt
ttattgattatcgacttgaccggctcaaaactcaactatgccaaccgcct
cctttcctcttgacgagggtggaggagcacttaggtctgggatgggggag
tgatggggggatggctggcatacagctggggaatagtgacttgtgtgata
ccctgatgagcagtgtgtaggtgtctgtctattcaggtctccttcacagc
ctgtgatggccacctttatgctttccttgcagggcagaagtcagttccaa
gcctcctcatgaggatgaccctccttgctttgagaagcccccaagcaggc
acacttccttcccaagcctgtctcaagacaagccttctccagagaggacg
ctggccagcgaggaggccctgcagaagatctctgcccttgagaatgagct
tgctgcccttagagctcagattgccaagattgtgaccctgcaggagcaac
agagtccaagtgcaggtatgtggcccctgaagtggcttgttgtgactgga
cagtgcaagctgtgtcttctctagtcttgcctaagacagcacaaaacccg
atgatgtctgtgtgactttaatttgagaagagtagggaaaaaaatctgct
tggcaaactctgaaatgcctgcatttgaagtgggctgttgtgaatggctg
ctttatgggaagtttagattcccccatctggataaccactcctctcagaa
cacgagatgttacgtggaccttgttgttctggtgaacggaacttgtttct
tgggtaaggaccttgtg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19114935_19115997
seq2: B6Ng01-201L24.g_62_1128

seq1  GAATTCTTGCATTTTGAAGCATTCCCAGCGACTGGCATGTCCGACTTCAG  50
      |||||| |||||||||||||||||||| |||||||  |||||||||||||
seq2  GAATTCCTGCATTTTGAAGCATTCCCATCGACTGG-TTGTCCGACTTCAG  49

seq1  GGAGCAGTGTTTCCAGTGTTCAGACTTTGACAGTGTGGGCTTGAGAGAAA  100
      ||| ||  | ||||| ||| |  ||| ||||  || |||   |||| |||
seq2  GGAACAACGGTTCCATTGTACGCACTATGACTTTGGGGGGAAGAGAAAAA  99

seq1  TGACATTAACGATTCCCCTCTCCTTTCGGCTTCTGGGATGTGGTTGGATT  150
      |||||| ||| ||||||||||||||||||||| |   |||||| ||||||
seq2  TGACATGAACCATTCCCCTCTCCTTTCGGCTTTTTACATGTGGATGGATT  149

seq1  ACATGGTTCCCATATTTCTTGTTTGATGTGCTTAGTCAAACACAGGAATT  200
      ||  ||||||| | |  |||| |||| |||||||     ||    || ||
seq2  ACTAGGTTCCCGTTTGCCTTGATTGACGTGCTTAAGATTACCTTAGATTT  199

seq1  GCTGGTACTAGAAGGCAAAGCCAGGACCCTACAGAAGGGCTCAGACATTC  250
      | |||||||| | ||     ||| |||||||      |||||| ||||||
seq2  GTTGGTACTAAAGGGATTTACCATGACCCTAATCTTTGGCTCATACATTC  249

seq1  TCGGTTTGAGCTTCCCGGTGGTTATGATTAGATTGCAATTTGGAAGATGA  300
      || | |  ||| ||  || |      | |   |||||| |  ||||| | 
seq2  TCTGATGAAGC-TCTTGGGGACCCATACTCTGTTGCAAATATGAAGAGG-  297

seq1  AATTTTTTAGGTGA-AGACAAAAACAAAAGAAAACAAAACAAAACCAATC  349
        |||| | | | |  |||   | |     |||||  ||| |  |||| |
seq2  -CTTTTATTGATTATCGACTTGACCGGCTCAAAACTCAACTATGCCAA-C  345

seq1  GGCAGCCTTTCCTCTTGACAGTGGTGGAGGAGCAACAGGCTCTGTAGACA  399
       ||  ||||||||||||||   ||||||||||||    | ||||  ||  
seq2  CGCCTCCTTTCCTCTTGACGAGGGTGGAGGAGCACTTAGGTCTG-GGATG  394

seq1  GGAAAG-GAGTGGGGCAGTGCTGGCATACAGCTGGGGAATAGTGACTTGT  448
      ||  || ||  |||| |  |||||||||||||||||||||||||||||||
seq2  GGGGAGTGATGGGGGGATGGCTGGCATACAGCTGGGGAATAGTGACTTGT  444

seq1  GTGATACCCTGATGAGCAGTGTGTAGGTGTCTGTCTATTCAGGTCTCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACCCTGATGAGCAGTGTGTAGGTGTCTGTCTATTCAGGTCTCCTT  494

seq1  CACAGCCTGTGATGGCCACCTTTATGCTTTCCTTGCAGGGCAGAAGTCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTGTGATGGCCACCTTTATGCTTTCCTTGCAGGGCAGAAGTCAG  544

seq1  TTCCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGCCTCCTCATGAGGATGACCCTCCTTGCTTTGAGAAGCCCCCAA  594

seq1  GCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCACACTTCCTTCCCAAGCCTGTCTCAAGACAAGCCTTCTCCAGAG  644

seq1  AGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGCTGGCCAGCGAGGAGGCCCTGCAGAAGATCTCTGCCCTTGAGAA  694

seq1  TGAGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGCTGCCCTTAGAGCTCAGATTGCCAAGATTGTGACCCTGCAGG  744

seq1  AGCAACAGAGTCCAAGTGCAGGTATGTGGCCCCTGAAGTGGCTTGTTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGAGTCCAAGTGCAGGTATGTGGCCCCTGAAGTGGCTTGTTGTG  794

seq1  ACTGGACAGTGCAAGCTGTGTCTTCTCTAGTCTTGCCTAAGACAGCACAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAGTGCAAGCTGTGTCTTCTCTAGTCTTGCCTAAGACAGCACAA  844

seq1  AACCCGATGATGTCTGTGTGACTTTAATTTGAGAAGAGTAGGGAAAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGATGATGTCTGTGTGACTTTAATTTGAGAAGAGTAGGGAAAAAAA  894

seq1  TCTGCTTGGCAAACTCTGAAATGCCTGCATTTGAAGTGGGCTGTTGTGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGGCAAACTCTGAAATGCCTGCATTTGAAGTGGGCTGTTGTGAA  944

seq1  TGGCTGCTTTATGGGAAGTTTAGATTCCCCCATCT-GATAACCACTCCTC  997
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGCTGCTTTATGGGAAGTTTAGATTCCCCCATCTGGATAACCACTCCTC  994

seq1  TCAG-ACACGAGGATGTAACGT-GACTTTGT--GTCTGGTGAAAGGAAC-  1042
      |||| |||||| ||||| |||| ||| ||||   ||||||||| ||||| 
seq2  TCAGAACACGA-GATGTTACGTGGACCTTGTTGTTCTGGTGAACGGAACT  1043

seq1  TGTTTC-TGGGT-AGGA-CTTGTG  1063
      |||||| ||||| |||| ||||||
seq2  TGTTTCTTGGGTAAGGACCTTGTG  1067