BAC Information

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BAC

Clone NameB6Ng01-202J23
Chromosome14 (Build37)3 (Build37)
Map Location 89,875,919 - 89,876,55671,331,250 - 71,331,372
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG328451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202J23.bB6Ng01-202J23.g
ACCGA023068GA023069
length1,002772
definitionB6Ng01-202J23.b B6Ng01-202J23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(89,875,919 - 89,876,556)(71,331,250 - 71,331,372)
sequence
gaattcaagtagaacacataatgaaataggacatgagtaaacataaaaat
tatttttagcattgtctttactcttaaactatctggtaatgttattttta
ttattgaagttccaaatggttaaagttatgtttttagtatagtgatattg
atgtcatttaagggagaacactcaacaattagttatcctcagtacataac
aagctaaaacttcaaggactaaacatcacacactaccaaaaaaaaaaagt
ttttctgatcaagcctgtgaaaaacattaatatagtggtataaatggata
tacttggaaggtcttttgattcaacaacatttcagtttagtaatgcctac
ataagcaaataaataatggtagtatgttcagcaatagggtctttggcatc
ctcagctaagggcttttgacccagtttatagtataagacatgacttctct
attattcagcagacctgaaattcactctgaaaattttttgttacccccct
aaggatcataacaccactgcacatgtgggaatattttaccttagaggtta
tgatgtagatcacagtattcatagttagagagaccaatgttggcatttct
cctacatcaccctaagtagtatcttctactttcatttcctcagaaaattg
gaaatagttttacctgaatacccagcaatcgcacttctgggtacccgaaa
ggtgttcctccatacacaaagacatgtactcctctatgctcatagcagcc
tatttgtagtcaaaaacgggaaggaacccagatgtctgtcaacagaagaa
tggatatagaaaatgtggttcatttacacagtagaatactatttagctaa
tgaaaaccaggtcattatgaattttacaggcaaatggatggaactagtaa
atataatcctgactgaagtaatccagacctaaaggaaaatgcatggcatt
tattcactggtatgtgcagattggcccatagtatgatagattaagccata
ac
gaattcattatagataaacatgctccaggtccatggatttaacattaaaa
tagtcatattctatggagaaggtttatttacattttttcattcactttca
taaagaaaattaaaaaatagcctctatacagggatgtcaatagcgtattg
tttagtctacatgaaaattacttcatagagattttccagttttggctttt
gtagtagaactgaacatttttttaatttccttggtttctgttgttatgtc
tccccttttcatttcttgttttgttaatttggctactctctctgtgctct
ctggttagtgtggctaagggtttatctatcttgttgattttctcacagaa
ccagctcctggtttggttgattctttgtacagttcttttagtttctactt
ggttgattttagccctgagtttgattgtttcctgacatctactcaccttg
catgtatttgcttctttttgttctagagctttccagtgtgctgtcaagct
gctagtacatgctttctttggtttcttttaggagtctctcagagctatga
gttttcttcttaggactgctttcattgtattccataagtttgggtatgtt
gtgccttcattttcattaaattctaaagagtctttaatttcttttccttc
tttcttccttgatcaaatttttattcagtagagagttttttctactttca
ggtgtaagtgggctttctgttgtatttgttgttattgaagaacatcctta
gtccattgtgattattccaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89875919_89876556
seq2: B6Ng01-202J23.b_48_685

seq1  GAATTCAAGTAGAACACATAATGAAATAGGACATGAGTAAACATAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAGAACACATAATGAAATAGGACATGAGTAAACATAAAAAT  50

seq1  TATTTTTAGCATTGTCTTTACTCTTAAACTATCTGGTAATGTTATTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGCATTGTCTTTACTCTTAAACTATCTGGTAATGTTATTTTTA  100

seq1  TTATTGAAGTTCCAAATGGTTAAAGTTATGTTTTTAGTATAGTGATATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAGTTCCAAATGGTTAAAGTTATGTTTTTAGTATAGTGATATTG  150

seq1  ATGTCATTTAAGGGAGAACACTCAACAATTAGTTATCCTCAGTACATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTAAGGGAGAACACTCAACAATTAGTTATCCTCAGTACATAAC  200

seq1  AAGCTAAAACTTCAAGGACTAAACATCACACACTACCAAAAAAAAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAAACTTCAAGGACTAAACATCACACACTACCAAAAAAAAAAAGT  250

seq1  TTTTCTGATCAAGCCTGTGAAAAACATTAATATAGTGGTATAAATGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGATCAAGCCTGTGAAAAACATTAATATAGTGGTATAAATGGATA  300

seq1  TACTTGGAAGGTCTTTTGATTCAACAACATTTCAGTTTAGTAATGCCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGAAGGTCTTTTGATTCAACAACATTTCAGTTTAGTAATGCCTAC  350

seq1  ATAAGCAAATAAATAATGGTAGTATGTTCAGCAATAGGGTCTTTGGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAATAAATAATGGTAGTATGTTCAGCAATAGGGTCTTTGGCATC  400

seq1  CTCAGCTAAGGGCTTTTGACCCAGTTTATAGTATAAGACATGACTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAGGGCTTTTGACCCAGTTTATAGTATAAGACATGACTTCTCT  450

seq1  ATTATTCAGCAGACCTGAAATTCACTCTGAAAATTTTTTGTTACCCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAGCAGACCTGAAATTCACTCTGAAAATTTTTTGTTACCCCCCT  500

seq1  AAGGATCATAACACCACTGCACATGTGGGAATATTTTACCTTAGAGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCATAACACCACTGCACATGTGGGAATATTTTACCTTAGAGGTTA  550

seq1  TGATGTAGATCACAGTATTCATAGTTAGAGAGACCAATGTTGGCATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGATCACAGTATTCATAGTTAGAGAGACCAATGTTGGCATTTCT  600

seq1  CCTACATCACCCTAAGTAGTATCTTCTACTTTCATTTC  638
      ||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCACCCTAAGTAGTATCTTCTACTTTCATTTC  638

seq1: chr3_71331250_71331372
seq2: B6Ng01-202J23.g_301_440 (reverse)

seq1  AAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATA  50
      ||||||| |||||||| ||||| ||||||| |||||||||||||||||||
seq2  AAAGAATCAACCAAACCAGGAGCTGGTTCTGTGAGAAAATCAACAAGATA  50

seq1  GATAAACCCTTAGCTAGACTCACTA----------------AATCCTAAT  84
      |||||||||||||| | ||| || |                 | || |||
seq2  GATAAACCCTTAGCCACACTAACCAGAGAGCACAGAGAGAGTAGCCAAAT  100

seq1  TAACAAAATCAGAAATGAAAA-GGGAGACATAACAACAGA  123
      ||||||||  ||||||||||| ||||||||||||||||||
seq2  TAACAAAACAAGAAATGAAAAGGGGAGACATAACAACAGA  140