BAC Information

Click to search

BAC

Clone NameB6Ng01-203B01
Chromosome3 (Build37)
Map Location 78,764,298 - 78,765,465
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626461, LOC667526, LOC626479, LOC100041691, LOC383883, LOC100041748, LOC100041716
Downstream geneLOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203B01.bB6Ng01-203B01.g
ACCGA023385GA023386
length1,0031,183
definitionB6Ng01-203B01.b B6Ng01-203B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaccaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgaacatagtactaccagaggatcccgcaatacctctcctgggc
ttatatccagaagatattccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactgctcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagatac
ttaggatacccaagatataagatacaatttgtgaaactcatgaaactaaa
gaagaatgaagaccaaagtgtggatactttactccttcttagaactgtga
acaaaacacacatggaaggatttacagagacaaagtttggagctgagatg
aaatgatggatcatctagagactgccatatccggggatccatcccataat
cagcctccaaacgctgacaccaaacgctgacactattgcatacactagca
agattttgctgaagagaccctgatatagctgtctcttctgagactatgcc
gaggcctagcaaacacagaagtgaatgctcacatttagctattggatgga
tcacagggcctcctatggaggagctaaggaaagtaccaaggagctaaggg
gat
gaattctctttaatattctttggcttctttccacatatttcgaaaaatag
caagatacgatactgcacacatgagtgcatgaggaacgaagcgaagggat
agatcttgggctcgtttcagctttcagagaacaaccctgccttttcccat
cgagaagtagctgtgaggggctgcagtgttgtggcatgccccatttgctc
tctggacagtctttgattccaggctccttcccttgttgctcaagacctta
aggggtctaagaactgtttttccttactaggaatcaagttgaggttttca
tgagtgctggatgttccttgccagttagcttctcccctgtgcccgtctaa
ggtctgcatgagaagccctactaagcagatctgttccaatacagaggggc
tcaataccacaatccttatctagatcaaaccttccattctattccttgta
ggtttgaattatgttacactgtgatggtcctaagcctgtctcagcactcc
agggtcatctaccacctttaaggctgacaactgctatgttagccatgctt
ctcaattcccctctgccctgtagcacaacatgttcgcaggtgtctcggat
caaaattgctttctttagtgggaggagagggacatctcctgcctaccgcc
aagtgtcatgaatattgggttggtttatacaccagccattatggtgaaag
tcaggcttgtaatgttatcttttattttttgagattataatataactata
ttacatcatatctttctcccttccctttcttccctccaaaccctcccaca
caccccttcttgctctctttcaaactcatggcatctattctccattaatt
gattaatagctctctctcctcacttaaataaataagcacatcctactcgg
tattatttgtgtacattttcaatgcgatttgggatttgaacaaccaatca
ttgtgctctctctgaggaagactgttctccccactccaagtggtccttta
gttgtctgttagaactttgtgtaggttggaggttcttctgggctttcccc
atcctacctttgccattatctgtggaattgggttccttgttcaagcttca
aggctaggcagccatattgatggaatttttatgaccagagctctctgcca
atcatcctagggagacacatcactcgaagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_78764298_78765465
seq2: B6Ng01-203B01.g_61_1243 (reverse)

seq1  TTTTCTCTGAGTG--GTGTCT-CCTAGGAATGAATGGCAGA-AGCTCTGC  46
      ||||||  |||||  |||||| |||||| |||| ||||||| ||||||| 
seq2  TTTTCTTCGAGTGATGTGTCTCCCTAGG-ATGATTGGCAGAGAGCTCTGG  49

seq1  CCATAAAA--TCCATCAATATGGCTGCCTAACCCTG-AGC-TGAACAAG-  91
       |||||||  |||||||||||||||||||| || || ||| |||||||| 
seq2  TCATAAAAATTCCATCAATATGGCTGCCTAGCCTTGAAGCTTGAACAAGG  99

seq1  -AACCAAATCAACAGATAATGCCAAA-GTA-GATGGGGAAAGCCCAGAAG  138
       | |||| || |||||||||| |||| ||| |||||||||||||||||||
seq2  AACCCAATTCCACAGATAATGGCAAAGGTAGGATGGGGAAAGCCCAGAAG  149

seq1  -ACCTCAACCCTACACAAAGTTCT-ACAGACAACT-AAGGACCACTTGGA  185
       ||||| | ||||||||||||||| |||||||||| ||||||||||||||
seq2  AACCTCCAACCTACACAAAGTTCTAACAGACAACTAAAGGACCACTTGGA  199

seq1  GTGGGAGAAACAGTCTTCCTCAGAGAGAGCACAATGATTGGTTGTTCAAA  235
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGAACAGTCTTCCTCAGAGAGAGCACAATGATTGGTTGTTCAAA  249

seq1  T-CCAAATCGCATTGAAAATGTACACAAATAATACCGAGTAGGATGTGCT  284
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAATCGCATTGAAAATGTACACAAATAATACCGAGTAGGATGTGCT  299

seq1  TATTTATTTAAGTGAGGAGAGAGAGCTATTAATCAATTAATGGAGAATAG  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTAAGTGAGGAGAGAGAGCTATTAATCAATTAATGGAGAATAG  349

seq1  ATGCCATGAGTTTGAAAGAGAGCAAGAAGGGGTGTGTGGGAGGGTTTGGA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATGAGTTTGAAAGAGAGCAAGAAGGGGTGTGTGGGAGGGTTTGGA  399

seq1  GGGAAGAAAGGGAAGGGAGAAAGATATGATGTAATATAGTTATATTATAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAAGGGAAGGGAGAAAGATATGATGTAATATAGTTATATTATAA  449

seq1  TCTCAAAAAATAAAAGATAACATTACAAGCCTGACTTTCACCATAATGGC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAAATAAAAGATAACATTACAAGCCTGACTTTCACCATAATGGC  499

seq1  TGGTGTATAAACCAACCCAATATTCATGACACTTGGCGGTAGGCAGGAGA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATAAACCAACCCAATATTCATGACACTTGGCGGTAGGCAGGAGA  549

seq1  TGTCCCTCTCCTCCCACTAAAGAAAGCAATTTTGATCCGAGACACCTGCG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCTCCTCCCACTAAAGAAAGCAATTTTGATCCGAGACACCTGCG  599

seq1  AACATGTTGTGCTACAGGGCAGAGGGGAATTGAGAAGCATGGCTAACATA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTGTGCTACAGGGCAGAGGGGAATTGAGAAGCATGGCTAACATA  649

seq1  GCAGTTGTCAGCCTTAAAGGTGGTAGATGACCCTGGAGTGCTGAGACAGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGTCAGCCTTAAAGGTGGTAGATGACCCTGGAGTGCTGAGACAGG  699

seq1  CTTAGGACCATCACAGTGTAACATAATTCAAACCTACAAGGAATAGAATG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACCATCACAGTGTAACATAATTCAAACCTACAAGGAATAGAATG  749

seq1  GAAGGTTTGATCTAGATAAGGATTGTGGTATTGAGCCCCTCTGTATTGGA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTGATCTAGATAAGGATTGTGGTATTGAGCCCCTCTGTATTGGA  799

seq1  ACAGATCTGCTTAGTAGGGCTTCTCATGCAGACCTTAGACGGGCACAGGG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTGCTTAGTAGGGCTTCTCATGCAGACCTTAGACGGGCACAGGG  849

seq1  GAGAAGCTAACTGGCAAGGAACATCCAGCACTCATGAAAACCTCAACTTG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTAACTGGCAAGGAACATCCAGCACTCATGAAAACCTCAACTTG  899

seq1  ATTCCTAGTAAGGAAAAACAGTTCTTAGACCCCTTAAGGTCTTGAGCAAC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAGTAAGGAAAAACAGTTCTTAGACCCCTTAAGGTCTTGAGCAAC  949

seq1  AAGGGAAGGAGCCTGGAATCAAAGACTGTCCAGAGAGCAAATGGGGCATG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGAGCCTGGAATCAAAGACTGTCCAGAGAGCAAATGGGGCATG  999

seq1  CCACAACACTGCAGCCCCTCACAGCTACTTCTCGATGGGAAAAGGCAGGG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACACTGCAGCCCCTCACAGCTACTTCTCGATGGGAAAAGGCAGGG  1049

seq1  TTGTTCTCTGAAAGCTGAAACGAGCCCAAGATCTATCCCTTCGCTTCGTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCTGAAAGCTGAAACGAGCCCAAGATCTATCCCTTCGCTTCGTT  1099

seq1  CCTCATGCACTCATGTGTGCAGTATCGTATCTTGCTATTTTTCGAAATAT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGCACTCATGTGTGCAGTATCGTATCTTGCTATTTTTCGAAATAT  1149

seq1  GTGGAAAGAAGCCAAAGAATATTAAAGAGAATTC  1168
      ||||||||||||||||||||||||||||||||||
seq2  GTGGAAAGAAGCCAAAGAATATTAAAGAGAATTC  1183