BAC Information

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BAC

Clone NameB6Ng01-203C01
Chromosome3 (Build37)
Map Location 48,247,246 - 48,248,121
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039426, LOC666202, LOC666208
Downstream gene1700018B24Rik, LOC100039404, EG666230, 4932443G14, LOC545519, LOC676568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203C01.bB6Ng01-203C01.g
ACCGA023429GA023430
length87892
definitionB6Ng01-203C01.b B6Ng01-203C01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagttcacctagtagaaacttcaaaatagactttaattgaca
gttttcatagataataatggagttatttgttaaatatataatatattgga
ctgaaaatattagcttgaaatagtaactttagtagtgactagtatatgta
ggaactcttctgatattttactaattttaaataaatgtatataaatggat
caattttagcaatatttagtttacttactttttaagattgaaatttatgg
attattatagaatacaaggactcatttgaagagttttgtcaaccatgatt
cctggttggttggactctttgtaaggcaggctctgcttctaagggtagtt
gagcatcttaactgtatgcactggaaaaaagcaggaaaagaagaaaaaag
gcgtattggagtaggtgggtagggaagtgagcctggagaaggaacatagt
gtagggcttgaggaggataggatcagggacatggcatcagattccctgta
agaattatggatcagaaagtacaaggcaagagaacgtattttcataatca
gtagtggtatcttcaaagtaatcaatttgatgccttgttttttccagtct
atactttttacttagctttaaaaagtaataaactatgataatgatgctta
ctcaatactaaaaataaagaattttttaaacctttgacatgatattattc
aatttataatgagttcaaactgacaaagaattaatgagagtcatctataa
tttattttttaattaaagggatagactgcatatcagtattgaaagcactg
tcatacataacaaacaaacacactctctgacagagagagatgagatatac
ccaatacataaattcaagaaccctaagg

cagggtggggaggcaggagtgggtgggtaggtaggataacacctcataga
aggatggggaatgcagatggaatggggtttgggggaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_48247246_48248121
seq2: B6Ng01-203C01.b_47_923 (reverse)

seq1  CTTA-GGTTCTTGAATTTATGTATATGTGTATATCTCATCTCTCTCTGTC  49
      |||| ||||||||||||||||||| || ||||||||||||||||||||||
seq2  CTTAGGGTTCTTGAATTTATGTAT-TGGGTATATCTCATCTCTCTCTGTC  49

seq1  TGTGAGTGTGTTTGTTTGTTTATGTATGACAGTGCTTTCAATACTGATAT  99
       | ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAGAGTGTGTTTGTTTG-TTATGTATGACAGTGCTTTCAATACTGATAT  98

seq1  GCAGTCTATCCCTTTAATT-AAAAATAAATTATAGATGACTCTCATTAAT  148
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCAGTCTATCCCTTTAATTAAAAAATAAATTATAGATGACTCTCATTAAT  148

seq1  TCTTTGTCAGTTTGAACTCATTATAAATTGAATAATATCATGTCAAAGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCAGTTTGAACTCATTATAAATTGAATAATATCATGTCAAAGGT  198

seq1  TT-AAAAATTCTTTATTTTTAGTATTGAGTAAGCATCATTATCATAGTTT  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATTCTTTATTTTTAGTATTGAGTAAGCATCATTATCATAGTTT  248

seq1  ATTACTTTTTAAAGCTAAGTAAAAAGTATAGACTGGAAAAAACAAGGCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTTTAAAGCTAAGTAAAAAGTATAGACTGGAAAAAACAAGGCAT  298

seq1  CAAATTGATTACTTTGAAGATACCACTACTGATTATGAAAATACGTTCTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGATTACTTTGAAGATACCACTACTGATTATGAAAATACGTTCTC  348

seq1  TTGCCTTGTACTTTCTGATCCATAATTCTTACAGGGAATCTGATGCCATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGTACTTTCTGATCCATAATTCTTACAGGGAATCTGATGCCATG  398

seq1  TCCCTGATCCTATCCTCCTCAAGCCCTACACTATGTTCCTTCTCCAGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATCCTATCCTCCTCAAGCCCTACACTATGTTCCTTCTCCAGGCT  448

seq1  CACTTCCCTACCCACCTACTCCAATACGCCTTTTTTCTTCTTTTCCTGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTACCCACCTACTCCAATACGCCTTTTTTCTTCTTTTCCTGCT  498

seq1  TTTTTCCAGTGCATACAGTTAAGATGCTCAACTACCCTTAGAAGCAGAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAGTGCATACAGTTAAGATGCTCAACTACCCTTAGAAGCAGAGC  548

seq1  CTGCCTTACAAAGAGTCCAACCAACCAGGAATCATGGTTGACAAAACTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTACAAAGAGTCCAACCAACCAGGAATCATGGTTGACAAAACTCT  598

seq1  TCAAATGAGTCCTTGTATTCTATAATAATCCATAAATTTCAATCTTAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAGTCCTTGTATTCTATAATAATCCATAAATTTCAATCTTAAAA  648

seq1  AGTAAGTAAACTAAATATTGCTAAAATTGATCCATTTATATACATTTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTAAACTAAATATTGCTAAAATTGATCCATTTATATACATTTATT  698

seq1  TAAAATTAGTAAAATATCAGAAGAGTTCCTACATATACTAGTCACTACTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAGTAAAATATCAGAAGAGTTCCTACATATACTAGTCACTACTA  748

seq1  AAGTTACTATTTCAAGCTAATATTTTCAGTCCAATATATTATATATTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTATTTCAAGCTAATATTTTCAGTCCAATATATTATATATTTAA  798

seq1  CAAATAACTCCATTATTATCTATGAAAACTGTCAATTAAAGTCTATTTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACTCCATTATTATCTATGAAAACTGTCAATTAAAGTCTATTTTG  848

seq1  AAGTTTCTACTAGGTGAACTAATGAATTC  876
      |||||||||||||||||||||||||||||
seq2  AAGTTTCTACTAGGTGAACTAATGAATTC  877


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