BAC Information

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BAC

Clone NameB6Ng01-203N12
Chromosome3 (Build37)
Map Location 118,432,716 - 118,483,939
singlet/doubletdoublet
Overlap geneDpyd
Upstream geneEG668759, Snx7, LOC100043260
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203N12.bB6Ng01-203N12.g
ACCGA023949GA023950
length1,074896
definitionB6Ng01-203N12.b B6Ng01-203N12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,432,716 - 118,433,783)(118,483,045 - 118,483,939)
sequence
gaattctacatagttgtggcttacatttattggctgttcctcattttagt
tttttaattccatatattttctactcaactaaaaccccatacagtcttct
ttatattgactctttgtgaatttcacatcatgcagtacaatcccactcat
atccccatccctatattgttccattgcccttgctattccccctaaaagaa
aacaaaaataaaattaattcattttaaaaacatctcaccatgacagtctt
taattcactctctctctgtctctgtctctctgcctctgtctgtctgtctg
tctgtctctctctctctgtctctctctctctctctctctctctctctctc
tctctctctctctctctctctctctcttgctctgggtgtgtttgtgtatg
cgtgcacacatgcaaaattataaacacaatatagagtaatttgtatataa
tttatatgtctagaactggaaagtggttaggattaatgagagcttgtgac
cagtcatatctaggcctcttgctttttaaaatgcttacatcatgtcttca
aaatcattctcctattaaaaaatataaatatggcattaaatgcagcatta
tatctctcaggttgcatccaatggacctaggaaacactttaaaaatttta
gtaatttccatttcattttcatgatttatggttgtattcctggtgaagac
ttattttccttaatggagcatactacaaattcagatataaaaagaattgt
cataaggtggcagtatgtttcaatggtaaccaccaatgtagaaaaagttc
ttgtactgggtggtcctttagccaatggttgaagatgattcaaataaagg
attcggctttatttgtaagaaaactgagcagctattacttaggagatagg
aagagttagtggacatactgcagtttgggttttattcgtttacatcttct
aatgcccgcggatcatgagcaaatagatctgttactttcattaacctaca
cttcataaggaaagccaatgccttcccattacaggctgtccacggttaca
taactaggtaaataaaggcaccta

gaattcaaataaactttagattttttcattagaataaaatctttgttggg
tttatgtggttatcataagtgtgccttgcttgcacaaagggtgaagagga
gagttatgtgcagatagagtttgttgttcacagtggcagtgtcatggttt
ttgtttttgaattatttttaatgcaacacatagtgaaagagtttaatttt
gtgaaaaaagatttcctaaaaagttctttgaaaatgctgtcaaaaagcag
ggtcgtctaagcactaattctattccagcctgaaaatttggggccatgtt
ggtggtgctccaaaagatattttctttatttacatttcaaatgttatcct
ctttcattttgtttagtggttcttccttatttccgcagtcctttgatttg
attccttctgatcatctctaacacctcactgtggaaagtggactaatgaa
aaacattctaaactattagcagacaaaaatataaacacctggaagttatg
ataaaatggtaagtggtgtgcttacaaacagggccctatcataactgccc
tatgaaaagcccaacaagcagctgaaaaagtcagatgcaaatattctcac
ccaaccaatggacaaaagctgctgacccctgtggttgaattagggaaaag
ctgaaagaagatgtggagggcgaccccataagaagaccaatagtctcaac
taccctagactcttcgggtctctcagacactgagccactaaccagacagc
atacaccagctgatatgaggcccgcaagacatatacagcagagaactgct
gggtcaggactcagtcagaaaagatgcaactaatccttttagagaattga
ggccccaggaagtggggaggtctggtggggtgagtgggatggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118432716_118433783
seq2: B6Ng01-203N12.b_45_1118

seq1  GAATTCTACATAGTTGTGGCTTACATTTATTGGCTGTTCCTCATTTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATAGTTGTGGCTTACATTTATTGGCTGTTCCTCATTTTAGT  50

seq1  TTTTTAATTCCATATATTTTCTACTCAACTAAAACCCCATACAGTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTCCATATATTTTCTACTCAACTAAAACCCCATACAGTCTTCT  100

seq1  TTATATTGACTCTTTGTGAATTTCACATCATGCAGTACAATCCCACTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGACTCTTTGTGAATTTCACATCATGCAGTACAATCCCACTCAT  150

seq1  ATCCCCATCCCTATATTGTTCCATTGCCCTTGCTATTCCCCCTAAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATCCCTATATTGTTCCATTGCCCTTGCTATTCCCCCTAAAAGAA  200

seq1  AACAAAAATAAAATTAATTCATTTTAAAAACATCTCACCATGACAGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATAAAATTAATTCATTTTAAAAACATCTCACCATGACAGTCTT  250

seq1  TAATTCACTCTCTCTCTGTCTCTGTCTCTCTGCCTCTGTCTGTCTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACTCTCTCTCTGTCTCTGTCTCTCTGCCTCTGTCTGTCTGTCTG  300

seq1  TCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  350

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTGGGTGTGTTTGTGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTGGGTGTGTTTGTGTATG  400

seq1  CGTGCACACATGCAAAATTATAAACACAATATAGAGTAATTTGTATATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCACACATGCAAAATTATAAACACAATATAGAGTAATTTGTATATAA  450

seq1  TTTATATGTCTAGAACTGGAAAGTGGTTAGGATTAATGAGAGCTTGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTCTAGAACTGGAAAGTGGTTAGGATTAATGAGAGCTTGTGAC  500

seq1  CAGTCATATCTAGGCCTCTTGCTTTTTAAAATGCTTACATCATGTCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATATCTAGGCCTCTTGCTTTTTAAAATGCTTACATCATGTCTTCA  550

seq1  AAATCATTCTCCTATTAAAAAATATAAATATGGCATTAAATGCAGCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTCTCCTATTAAAAAATATAAATATGGCATTAAATGCAGCATTA  600

seq1  TATCTCTCAGGTTGCATCCAATGGACCTAGGAAACACTTTAAAAATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCAGGTTGCATCCAATGGACCTAGGAAACACTTTAAAAATTTTA  650

seq1  GTAATTTCCATTTCATTTTCATGATTTATGGTTGTATTCCTGGTGAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTCCATTTCATTTTCATGATTTATGGTTGTATTCCTGGTGAAGAC  700

seq1  TTATTTTCCTTAATGGAGCATACTACAAATTCAGATATAAAAAGAATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCTTAATGGAGCATACTACAAATTCAGATATAAAAAGAATTGT  750

seq1  CATAAGGTGGCAGTATGTTTCAATGGTAACCACCAATGTAGAAAAAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTGGCAGTATGTTTCAATGGTAACCACCAATGTAGAAAAAGTTC  800

seq1  TTGTACTGGGTGGTCCTTTAGCCAATGG-TGAAGATGATTCAAATAAAGG  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGTACTGGGTGGTCCTTTAGCCAATGGTTGAAGATGATTCAAATAAAGG  850

seq1  ATTCGGCTTTATTTGTAAGAAAACTGAGCAGCTATTACTTAGGAGATAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGCTTTATTTGTAAGAAAACTGAGCAGCTATTACTTAGGAGATAGG  900

seq1  AAGAGTTAGTGGACATACTGCAGTTTGGGTTTTTATTCGTTTTAATCTTT  949
      ||||||||||||||||||||||||||||| ||||||||||||  ||| ||
seq2  AAGAGTTAGTGGACATACTGCAGTTTGGG-TTTTATTCGTTTACATC-TT  948

seq1  CTAATGCCAG-GGATCATGAGCAAATAGATCTATTACTTTCATT-AGCTA  997
      |||||||| | ||||||||||||||||||||| ||||||||||| | |||
seq2  CTAATGCCCGCGGATCATGAGCAAATAGATCTGTTACTTTCATTAACCTA  998

seq1  CAACTCAT-AGGAAAGCCAGTGCCTTCCCATTAC-GGCTGTCCACAG-TA  1044
      ||  |||| |||||||||| |||||||||||||| |||||||||| | ||
seq2  CACTTCATAAGGAAAGCCAATGCCTTCCCATTACAGGCTGTCCACGGTTA  1048

seq1  CAT-AGTAGTTAAATAAA-GCACCTA  1068
      ||| | ||| |||||||| |||||||
seq2  CATAACTAGGTAAATAAAGGCACCTA  1074


seq1: chr3_118483045_118483939
seq2: B6Ng01-203N12.g_63_958 (reverse)

seq1  TTCCCCATCCCACTCACCCCACCAGACCTCCCCACTTCCTGGGGCCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATCCCACTCACCCCACCAGACCTCCCCACTTCCTGGGGCCTCAA  50

seq1  TTCTCT-AAAGGATTAGTTGCATCTTTTCTGACTGAGTCCTGACCCAGCA  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAAAGGATTAGTTGCATCTTTTCTGACTGAGTCCTGACCCAGCA  100

seq1  GTTCTCTGCTGTATATGTCTTGCGGGCCTCATATCAGCTGGTGTATGCTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGCTGTATATGTCTTGCGGGCCTCATATCAGCTGGTGTATGCTG  150

seq1  TCTGGTTAGTGGCTCAGTGTCTGAGAGACCCGAAGAGTCTAGGGTAGTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTAGTGGCTCAGTGTCTGAGAGACCCGAAGAGTCTAGGGTAGTTG  200

seq1  AGACTATTGGTCTTCTTATGGGGTCGCCCTCCACATCTTCTTTCAGCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATTGGTCTTCTTATGGGGTCGCCCTCCACATCTTCTTTCAGCTTT  250

seq1  TCCCTAATTCAACCACAGGGGTCAGCAGCTTTTGTCCATTGGTTGGGTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAATTCAACCACAGGGGTCAGCAGCTTTTGTCCATTGGTTGGGTGA  300

seq1  GAATATTTGCATCTGACTTTTTCAGCTGCTTGTTGGGCTTTTCATAGGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTGCATCTGACTTTTTCAGCTGCTTGTTGGGCTTTTCATAGGGC  350

seq1  AGTTATGATAGGGCCCTGTTTGTAAGCACACCACTTACCATTTTATCATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGATAGGGCCCTGTTTGTAAGCACACCACTTACCATTTTATCATA  400

seq1  ACTTCCAGGTGTTTATATTTTTGTCTGCTAATAGTTTAGAATGTTTTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGGTGTTTATATTTTTGTCTGCTAATAGTTTAGAATGTTTTTCA  450

seq1  TTAGTCCACTTTCCACAGTGAGGTGTTAGAGATGATCAGAAGGAATCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCACTTTCCACAGTGAGGTGTTAGAGATGATCAGAAGGAATCAAA  500

seq1  TCAAAGGACTGCGGAAATAAGGAAGAACCACTAAACAAAATGAAAGAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGACTGCGGAAATAAGGAAGAACCACTAAACAAAATGAAAGAGGA  550

seq1  TAACATTTGAAATGTAAATAAAGAAAATATCTTTTGGAGCACCACCAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTGAAATGTAAATAAAGAAAATATCTTTTGGAGCACCACCAACA  600

seq1  TGGCCCCAAATTTTCAGGCTGGAATAGAATTAGTGCTTAGACGACCCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCAAATTTTCAGGCTGGAATAGAATTAGTGCTTAGACGACCCTGC  650

seq1  TTTTTGACAGCATTTTCAAAGAACTTTTTAGGAAATCTTTTTTCACAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGACAGCATTTTCAAAGAACTTTTTAGGAAATCTTTTTTCACAAAA  700

seq1  TTAAACTCTTTCACTATGTGTTGCATTAAAAATAATTCAAAAACAAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCTTTCACTATGTGTTGCATTAAAAATAATTCAAAAACAAAAAC  750

seq1  CATGACACTGCCACTGTGAACAACAAACTCTATCTGCACATAACTCTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACTGCCACTGTGAACAACAAACTCTATCTGCACATAACTCTCCT  800

seq1  CTTCACCCTTTGTGCAAGCAAGGCACACTTATGATAACCACATAAACCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCCTTTGTGCAAGCAAGGCACACTTATGATAACCACATAAACCCA  850

seq1  ACAAAGATTTTATTCTAATGAAAAAATCTAAAGTTTATTTGAATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATTTTATTCTAATGAAAAAATCTAAAGTTTATTTGAATTC  896


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