BAC Information

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BAC

Clone NameB6Ng01-204A03
Chromosome3 (Build37)
Map Location 114,245,162 - 114,245,996
singlet/doubletsinglet
Overlap genenone
Upstream geneAmy1, Rnpc3, Col11a1, LOC100043220
Downstream geneOlfm3, EG546808
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204A03.bB6Ng01-204A03.g
ACCGA024070GA024071
length1,0471,183
definitionB6Ng01-204A03.b B6Ng01-204A03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatactcacaatcacacagaccagctcacaaccacctatactga
caactataggatccaatgccttcagtttctggatgcacctgtacttatgc
atatatacccacacagagaaagaataattaaaataaaatgtatctttaaa
attaataaatacagatatcagcattaattttatatggtgtaacatttcaa
aaattattaccctgttcatattcacatatatgtttgtggaattatacaaa
tgagaagaaatatatgagtttgtctttttgtgtctgggttacttcactca
aaaagattgtttcctcagaacccttttaaaaataactttatctaggttac
caaatacatctttgtagctaaatttgactgttaatttataactactcatt
ttattgaatattcattagccttcattaaaatgtattagtctgtctctaaa
agtacaggttcagtacacttttaaaggcacagtactgtcttaatttcctt
ctgatcatgctttaggcctcttctcaagttcaatgaagttgtaaacaaaa
aaagaagtcatggcctctactttttgtgtctttcaaaatggtaaatgttt
atagagccttggggctaagtcagtgactccttgtgtgacttttaaattct
ttacttattcctcggttggccccatgtggcttatgaaacaaaatactatc
tcagcactaatgaattccaatgtgtgtaaccatccctaaccttggcctta
aatggaaattgagaaatccattatttgagatgatgaatttacttggaaaa
taactatgtttcaagcttgacataccaagatttttaactttgaattttaa
gcacttatagcgtgcttctctctacagcataaattttccgtttaaaggat
atcaacatgtatccatccactcaaaggccgatcccacatctgattcaacc
ccaagagcaaataatgggcaaatcccatggactctgcaaacagagtacat
ctaaaatgcatgtacagtccacgtgtttaccttttttcattggtcaa

gaattcctaggaaagaaattaggagccatagatgcaagcatcacaaacag
aatacaagagatggaagagagaatctcagatacagaagattccatagaaa
acatggactcaacaatcaaagaaaataaaaaatgcaaaaggatcctaaat
caaaaattccaggaaatccaggacacaatgagaagaccaaacctatggat
aataggtatagatgagaaggaagatgttcaacttaaagagccagtaaata
tcttctacaaatttatagaagaaaatgtccttaacctaaagaaagagatg
tacatgaacataaaaggagcctacagaactcaaaatagactggacctgaa
aggaaattccttctgtcacataaaattaaaacatgaaatgcactaaacaa
tgaagaatattaaaagcagcgagggaaaaaagtcaagtaacatataaacg
gagattcattagaattacaccagattgctcaccagagactatgaaagtca
gatgatcctgggcagatgtcatataaacacaaagagaaaaagaaaaaaat
tgccagctcaggctacaataccctgcaaagctctcaatcaccatagatgg
acaaaccaaagtattccaagacaaaaccaaatttacacaatatctttcca
caaaagcccttcaaaggataataaagggaaaactccaacacaaagaggga
aactacaccctagaaaaaaacaagaaaataatctttcaacaaacctaaaa
gaaaatagccacatgaacaaaaaacaactctaacaataaaaacataagga
agcaacaatgacttttccttaatatctcttattatcaatggactcaatcc
ccccccaaaaggcatagactaacagattgattatgtaaacatgacccaat
atcttgcttcatataggaaacccacctcagtgacaaaagacatatactag
ctcagagttaaaaggctgaaaaacattttcaaagcaaatggtcccaagaa
aacaggctcgagtagccattctatatggaatgaatttactttcaccctaa
ggtatatttatttaaaacgaaacaagactaactacaacaaacagaagacc
ttcatagtcatgaagtaagtctactagatggactctccaattctgaacaa
ttcataatggcctcccaaaatgctaggagggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114245162_114245996
seq2: B6Ng01-204A03.b_49_883

seq1  GAATTCAATACTCACAATCACACAGACCAGCTCACAACCACCTATACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACTCACAATCACACAGACCAGCTCACAACCACCTATACTGA  50

seq1  CAACTATAGGATCCAATGCCTTCAGTTTCTGGATGCACCTGTACTTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATAGGATCCAATGCCTTCAGTTTCTGGATGCACCTGTACTTATGC  100

seq1  ATATATACCCACACAGAGAAAGAATAATTAAAATAAAATGTATCTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACCCACACAGAGAAAGAATAATTAAAATAAAATGTATCTTTAAA  150

seq1  ATTAATAAATACAGATATCAGCATTAATTTTATATGGTGTAACATTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAATACAGATATCAGCATTAATTTTATATGGTGTAACATTTCAA  200

seq1  AAATTATTACCCTGTTCATATTCACATATATGTTTGTGGAATTATACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTACCCTGTTCATATTCACATATATGTTTGTGGAATTATACAAA  250

seq1  TGAGAAGAAATATATGAGTTTGTCTTTTTGTGTCTGGGTTACTTCACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAAATATATGAGTTTGTCTTTTTGTGTCTGGGTTACTTCACTCA  300

seq1  AAAAGATTGTTTCCTCAGAACCCTTTTAAAAATAACTTTATCTAGGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTGTTTCCTCAGAACCCTTTTAAAAATAACTTTATCTAGGTTAC  350

seq1  CAAATACATCTTTGTAGCTAAATTTGACTGTTAATTTATAACTACTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATCTTTGTAGCTAAATTTGACTGTTAATTTATAACTACTCATT  400

seq1  TTATTGAATATTCATTAGCCTTCATTAAAATGTATTAGTCTGTCTCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAATATTCATTAGCCTTCATTAAAATGTATTAGTCTGTCTCTAAA  450

seq1  AGTACAGGTTCAGTACACTTTTAAAGGCACAGTACTGTCTTAATTTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGTTCAGTACACTTTTAAAGGCACAGTACTGTCTTAATTTCCTT  500

seq1  CTGATCATGCTTTAGGCCTCTTCTCAAGTTCAATGAAGTTGTAAACAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATGCTTTAGGCCTCTTCTCAAGTTCAATGAAGTTGTAAACAAAA  550

seq1  AAAGAAGTCATGGCCTCTACTTTTTGTGTCTTTCAAAATGGTAAATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTCATGGCCTCTACTTTTTGTGTCTTTCAAAATGGTAAATGTTT  600

seq1  ATAGAGCCTTGGGGCTAAGTCAGTGACTCCTTGTGTGACTTTTAAATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCCTTGGGGCTAAGTCAGTGACTCCTTGTGTGACTTTTAAATTCT  650

seq1  TTACTTATTCCTCGGTTGGCCCCATGTGGCTTATGAAACAAAATACTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTCCTCGGTTGGCCCCATGTGGCTTATGAAACAAAATACTATC  700

seq1  TCAGCACTAATGAATTCCAATGTGTGTAACCATCCCTAACCTTGGCCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTAATGAATTCCAATGTGTGTAACCATCCCTAACCTTGGCCTTA  750

seq1  AATGGAAATTGAGAAATCCATTATTTGAGATGATGAATTTACTTGGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATTGAGAAATCCATTATTTGAGATGATGAATTTACTTGGAAAA  800

seq1  TAACTATGTTTCAAGCTTGACATACCAAGATTTTT  835
      |||||||||||||||||||||||||||||||||||
seq2  TAACTATGTTTCAAGCTTGACATACCAAGATTTTT  835


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