BAC Information

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BAC

Clone NameB6Ng01-205G04
Chromosome3 (Build37)
Map Location 119,600,420 - 119,737,767
singlet/doubletdoublet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205G04.bB6Ng01-205G04.g
ACCGA025078GA025079
length1,075930
definitionB6Ng01-205G04.b B6Ng01-205G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,600,420 - 119,601,481)(119,736,847 - 119,737,767)
sequence
gaattcaaacagaagctttgaacaattaaacaaacaaacaaacaaataaa
taaaatcatttgctgccttgcacacccagatgacttcagagaaggtaccc
tcactgaggaccccttcccatactgctggtgtcaggcacggccactccac
cccagcactgtaccttcctttctctggctttccgttccttggcacagagt
ttccactcaagccccttcccacatgctcttcttgaacattttttaaagca
aatattgaggtttcgagatgaaaaccttcttataccatttgcaacgaaac
aagcgttagtcaaggggagtgagggagaagcagcaagatgctgggtggtg
ccttggaggagttcagggtttgcttgaagaaatgtaatgatgggaactca
cattcctgtgggaggcttgtcaagaaaacattatctcaaatgtgtagctg
ctacatcactcacaattacagagaggggaagaaccctaaaatcctcctcc
ttgttgcctgcaagttatgtaggctatgagttattttattgagcagtgtt
aagtgcaatcctgttggaaaaatgaagaacttattaattatctgaagttt
gaagtaattaagccaggcactgtcaggctgacacagttttctcagcagga
ggcaggattctttcagcagagtgaaggagggttttttttttcccagcccc
atatgttaggctacaggtgagccagttggtaaatatgtggcaccttttaa
ttatacctccgtgcaagctgtagcttgccttatgattccttgatcctgtg
tggctctcttggaaaagacgatgacatgggatgagtttccttcaggaagg
gaggaggagagcaaagtgggtctatagaaagctgggaaaccccaaggctg
tagtagggtgctgtttcactatgcttcactacgtaataggacctgacccc
atacactggagacggggttctattctgtgctggctgagtctgaccccaag
gatgttgagaagtcaagcttgcaagtgggagttcactggcagagcatggc
atattgcctcttggggttaaacaaa

gaattctccttagtgcccaggtttgtgatgcctaggatgctgcccactgc
acaacaatgacagttccatgtcattaactagctctttgtctattcacctt
gtctaggacagaaatgaaggcgatggcacaggatgtctctaagtaaagat
gccgaggtgcagctgcgctcacttgacttgtctcatcgactcctttgcat
ccatttatttaatttcactttacagtatttgcaagaagactattacagca
tttgttcttttagattcacatccaaattacttatcagtgttcattttaga
tttttctaatgctctctggaaaagaaatagtcaggagatggcttctgtat
ttaagaaaaattgactcatatacaaaggaataaagtttcttcacaaatat
gagaacagttaggtaaaatatattctactatcactgtggccttaaagaaa
agctgaatcaaatggcttatggggaaaaaggcttagcataagtatgtata
tatatatatatatatatatatatatatatatatatatatatatatattaa
catatttactgtccagggatcagcaatattaacaaagaattttcaaacaa
agctttgattttcatttgctggtatggaccagagtctgaaatgtcacagc
tcaataaaactaggtatttttccataataaatttattgttttagtattga
ttttctagattttaaaagatgagcaagagagaaaaagaaagaaaaaacaa
ttttctaaaaaagaaaaaatgtccactaagtgattattttctttaaacag
atttgttcctttacaatgatgatgccatttctgttttatcatttatgtaa
acacagcctaaggggaggggatataataggtgattgtgcagttagcaagc
atttccacaaaaatgttccttatgactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119600420_119601481
seq2: B6Ng01-205G04.b_46_1120

seq1  GAATTCAAACAGAAGCTTTGAACAATTAAACAAACAAACAAACAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGAAGCTTTGAACAATTAAACAAACAAACAAACAAATAAA  50

seq1  TAAAATCATTTGCTGCCTTGCACACCCAGATGACTTCAGAGAAGGTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATTTGCTGCCTTGCACACCCAGATGACTTCAGAGAAGGTACCC  100

seq1  TCACTGAGGACCCCTTCCCATACTGCTGGTGTCAGGCACGGCCACTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAGGACCCCTTCCCATACTGCTGGTGTCAGGCACGGCCACTCCAC  150

seq1  CCCAGCACTGTACCTTCCTTTCTCTGGCTTTCCGTTCCTTGGCACAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTGTACCTTCCTTTCTCTGGCTTTCCGTTCCTTGGCACAGAGT  200

seq1  TTCCACTCAAGCCCCTTCCCACATGCTCTTCTTGAACATTTTTTAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCAAGCCCCTTCCCACATGCTCTTCTTGAACATTTTTTAAAGCA  250

seq1  AATATTGAGGTTTCGAGATGAAAACCTTCTTATACCATTTGCAACGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAGGTTTCGAGATGAAAACCTTCTTATACCATTTGCAACGAAAC  300

seq1  AAGCGTTAGTCAAGGGGAGTGAGGGAGAAGCAGCAAGATGCTGGGTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTTAGTCAAGGGGAGTGAGGGAGAAGCAGCAAGATGCTGGGTGGTG  350

seq1  CCTTGGAGGAGTTCAGGGTTTGCTTGAAGAAATGTAATGATGGGAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGGAGTTCAGGGTTTGCTTGAAGAAATGTAATGATGGGAACTCA  400

seq1  CATTCCTGTGGGAGGCTTGTCAAGAAAACATTATCTCAAATGTGTAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGTGGGAGGCTTGTCAAGAAAACATTATCTCAAATGTGTAGCTG  450

seq1  CTACATCACTCACAATTACAGAGAGGGGAAGAACCCTAAAATCCTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCACTCACAATTACAGAGAGGGGAAGAACCCTAAAATCCTCCTCC  500

seq1  TTGTTGCCTGCAAGTTATGTAGGCTATGAGTTATTTTATTGAGCAGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCCTGCAAGTTATGTAGGCTATGAGTTATTTTATTGAGCAGTGTT  550

seq1  AAGTGCAATCCTGTTGGAAAAATGAAGAACTTATTAATTATCTGAAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCAATCCTGTTGGAAAAATGAAGAACTTATTAATTATCTGAAGTTT  600

seq1  GAAGTAATTAAGCCAGGCACTGTCAGGCTGACACAGTTTTCTCAGCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATTAAGCCAGGCACTGTCAGGCTGACACAGTTTTCTCAGCAGGA  650

seq1  GGCAGGATTCTTTCAGCAGAGTGAAGGAGGGTTTTTTTTTTCCCAGCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATTCTTTCAGCAGAGTGAAGGAGGGTTTTTTTTTTCCCAGCCCC  700

seq1  ATATGTTAGGCTACAGGTGAGCCAGTTGGTAAATATGTGGCACCTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTAGGCTACAGGTGAGCCAGTTGGTAAATATGTGGCACCTTTTAA  750

seq1  TTATACCTCCGTGCAAGCTGTAGCTTGCCTTATGATTCCTTGATCCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTCCGTGCAAGCTGTAGCTTGCCTTATGATTCCTTGATCCTGTG  800

seq1  TGGCTCTCTTGGAAAAGACGATGACAT-GGATGAGTTTCC-TCAGGAAGG  848
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TGGCTCTCTTGGAAAAGACGATGACATGGGATGAGTTTCCTTCAGGAAGG  850

seq1  GAGGAGGAGAGCAAAGTGGGTCTATAGAAAGCTGGGAAACCCCAAGGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGAGCAAAGTGGGTCTATAGAAAGCTGGGAAACCCCAAGGCTG  900

seq1  TAGTA-GGTGCTGTTTCACTATGCTTCACTACGTAATAGGACCTGACCCC  947
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGGTGCTGTTTCACTATGCTTCACTACGTAATAGGACCTGACCCC  950

seq1  ATACACTGGAGACGGGGTTCTA-TCTGTGCTGGCTGAG-CTGA-CCCAAG  994
      |||||||||||||||||||||| ||||||||||||||| |||| ||||||
seq2  ATACACTGGAGACGGGGTTCTATTCTGTGCTGGCTGAGTCTGACCCCAAG  1000

seq1  GATGTTGAG-AGTCAAGC-TGCAGGT-GGAGTTCAGTGGCAGAGCAT-GC  1040
      ||||||||| |||||||| |||| || |||||||| ||||||||||| ||
seq2  GATGTTGAGAAGTCAAGCTTGCAAGTGGGAGTTCACTGGCAGAGCATGGC  1050

seq1  ATA-TGGCTCT--GGGGTAAACAAA  1062
      ||| || ||||  ||| ||||||||
seq2  ATATTGCCTCTTGGGGTTAAACAAA  1075


seq1: chr3_119736847_119737767
seq2: B6Ng01-205G04.g_66_995 (reverse)

seq1  TTCAG-CATAA-GAACATTTCTGTGG-AATGCTTACTAACTTGACAATCA  47
      ||||| ||||| |||||||| ||||| ||||||| ||||||  |||||||
seq2  TTCAGTCATAAGGAACATTTTTGTGGAAATGCTTGCTAACTGCACAATCA  50

seq1  GCTATTATTATCCCTCCCCTTAGGCTGTGTTTACAT-AATGATAAAACAG  96
       |||||||   ||||||||||||||||||||||||| |||||||||||||
seq2  CCTATTATATCCCCTCCCCTTAGGCTGTGTTTACATAAATGATAAAACAG  100

seq1  AAATGGCATCATCATTGTAAAGGAAC-AATCTGTTTAAAGAAAATAATCA  145
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAATGGCATCATCATTGTAAAGGAACAAATCTGTTTAAAGAAAATAATCA  150

seq1  CTTAGTGGACATTTCT--CTTTTTAG-AAATTGTTTTTTCTTTTCTTTTC  192
      |||||||||||||| |   ||||||| ||||||||||||||||  |||||
seq2  CTTAGTGGACATTTTTTCTTTTTTAGAAAATTGTTTTTTCTTTCTTTTTC  200

seq1  TCTTCTTGCTCATCTTTTAAAATCTAGAAAATCAATACTAAAACAAT-AA  241
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TC-TCTTGCTCATCTTTTAAAATCTAGAAAATCAATACTAAAACAATAAA  249

seq1  TTTATTATGGAAAAATACCTAGTTTTATTGAGCTGTGACA-TTCAGACTC  290
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTATTATGGAAAAATACCTAGTTTTATTGAGCTGTGACATTTCAGACTC  299

seq1  TGGTCCATACCAGCAAATGAAAATCAAAGCTTTGTTTGAAAATTCTTTGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCATACCAGCAAATGAAAATCAAAGCTTTGTTTGAAAATTCTTTGT  349

seq1  TAATATTGCTGATCCCTGGACAGTAAAATGGATAATATATATATATATAT  390
      |||||||||||||||||||||||||||   | ||||||||||||||||||
seq2  TAATATTGCTGATCCCTGGACAGTAAATATGTTAATATATATATATATAT  399

seq1  ATATATATATATATATATATATATATATATATATACATACTTATGCTAAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATACATACTTATGCTAAG  449

seq1  CCTTTTTCCCCATAAGCCATTTGATTCAGCTTTTCTTTAAGGCCACAGTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCCCCATAAGCCATTTGATTCAGCTTTTCTTTAAGGCCACAGTG  499

seq1  ATAGTAGAATATATTTTACCTAACTGTTCTCATATTTGTGAAGAAACTTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGAATATATTTTACCTAACTGTTCTCATATTTGTGAAGAAACTTT  549

seq1  ATTCCTTTGTATATGAGTCAATTTTTCTTAAATACAGAAGCCATCTCCTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTGTATATGAGTCAATTTTTCTTAAATACAGAAGCCATCTCCTG  599

seq1  ACTATTTCTTTTCCAGAGAGCATTAGAAAAATCTAAAATGAACACTGATA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCTTTTCCAGAGAGCATTAGAAAAATCTAAAATGAACACTGATA  649

seq1  AGTAATTTGGATGTGAATCTAAAAGAACAAATGCTGTAATAGTCTTCTTG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTGGATGTGAATCTAAAAGAACAAATGCTGTAATAGTCTTCTTG  699

seq1  CAAATACTGTAAAGTGAAATTAAATAAATGGATGCAAAGGAGTCGATGAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTGTAAAGTGAAATTAAATAAATGGATGCAAAGGAGTCGATGAG  749

seq1  ACAAGTCAAGTGAGCGCAGCTGCACCTCGGCATCTTTACTTAGAGACATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCAAGTGAGCGCAGCTGCACCTCGGCATCTTTACTTAGAGACATC  799

seq1  CTGTGCCATCGCCTTCATTTCTGTCCTAGACAAGGTGAATAGACAAAGAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCATCGCCTTCATTTCTGTCCTAGACAAGGTGAATAGACAAAGAG  849

seq1  CTAGTTAATGACATGGAACTGTCATTGTTGTGCAGTGGGCAGCATCCTAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTAATGACATGGAACTGTCATTGTTGTGCAGTGGGCAGCATCCTAG  899

seq1  GCATCACAAACCTGGGCACTAAGGAGAATTC  921
      |||||||||||||||||||||||||||||||
seq2  GCATCACAAACCTGGGCACTAAGGAGAATTC  930


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