BAC Information

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BAC

Clone NameB6Ng01-205I05
Chromosome3 (Build37)
Map Location 17,851,326 - 17,852,397
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12
Downstream geneLOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205I05.bB6Ng01-205I05.g
ACCGA025174GA025175
length1,127252
definitionB6Ng01-205I05.b B6Ng01-205I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctacactggggcatcaagccttcacaggatcaaaggcccaac
ctcctattaatagccaaaaaggccatcctctgctacatatgcagctgggg
ccatgggttgttccataggtactctttggttggtgattaatccctgggag
ctctggggtgtctagttggttgatattgttcttcctaatgcagcggggtt
gcaaacccgttcagtacctttagtcctttctctaactcatccattgggga
ccctgtgctcagtctaatgattggctataaccatctgcctctgtatttgt
caggctctggcagagcctatcaggagacagctttatcaggatcctgtcag
caaacacttcttatcatcttcaatactgtctgggtttagtgtctgtatat
gggatggatccccaggtagaacagtctctggatggcctttccttcagtct
ctactccacactttgtctctgtatttcctataaacagaagagattctggc
ttaaaattttggagatgagtgagttgacccatccctcatccagtggatgt
gcctaacctctggatatttaaccatgttttctattgaaagcagacacaca
ctcagagaagggtattcaaagcccatgaatagacagtttcctcaggggaa
aagagacccaaaggatctgtgatgacagtttatatagcagaaagaaagct
tttatgtgcttatgggtaggatgagtttctgcttcacttcagaactactt
agtttgggttatcatgaaggtagggggagtattggataatccagacaaag
aactgaaaattggatcctaccaaagaagtcctcccttccctcttgtagaa
tatctgaaagtctcatgcattagttccctccagcaggagaagccacaaac
tctccctcttgataaaatagaaaagcaggaaacagaaattttacatgctt
aagtaaaaaaaatacattaaatgtacctaagacttccttctctgtctctg
ctactgaagaagctgtctgaacactactccttagtgtcagtcatggaaaa
tacttggtagatatttatggaaaaagtgaatctagaatgttctttttaaa
aaggtatctgattatgaataaagatac

agttctataagtactcgaagtgtaggggaatgcaagggaagggaggcagg
agtgggtgggtgggtgagggcacaccctcacgaagcagaagacgggggga
tgggaaagggggtttcccatggagaaattaggcacggggattacattccc
aatgtcaataaataaaagatctaataaaaattgccgcaccgatcttggtg
tcctcacattcccccctttaattccagcatggcggaggcagctgcttgct
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17851326_17852397
seq2: B6Ng01-205I05.b_111_1170

seq1  AAAGGCCATCCTCTGCTACATATGCAGCTGGGGCCATGGGTTGTTCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCATCCTCTGCTACATATGCAGCTGGGGCCATGGGTTGTTCCATA  50

seq1  GGTACTCTTTGGTTGGTGATTAATCCCTGGGAGCTCTGGGGTGTCTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTCTTTGGTTGGTGATTAATCCCTGGGAGCTCTGGGGTGTCTAGTT  100

seq1  GGTTGATATTGTTCTTCCTAATGCAGCGGGGTTGCAAACCCGTTCAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATATTGTTCTTCCTAATGCAGCGGGGTTGCAAACCCGTTCAGTAC  150

seq1  CTTTAGTCCTTTCTCTAACTCATCCATTGGGGACCCTGTGCTCAGTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCCTTTCTCTAACTCATCCATTGGGGACCCTGTGCTCAGTCTAA  200

seq1  TGATTGGCTATAACCATCTGCCTCTGTATTTGTCAGGCTCTGGCAGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGCTATAACCATCTGCCTCTGTATTTGTCAGGCTCTGGCAGAGCC  250

seq1  TATCAGGAGACAGCTTTATCAGGATCCTGTCAGCAAACACTTCTTATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAGACAGCTTTATCAGGATCCTGTCAGCAAACACTTCTTATCAT  300

seq1  CTTCAATACTGTCTGGGTTTAGTGTCTGTATATGGGATGGATCCCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATACTGTCTGGGTTTAGTGTCTGTATATGGGATGGATCCCCAGGT  350

seq1  AGAACAGTCTCTGGATGGCCTTTCCTTCAGTCTCTACTCCACACTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTCTCTGGATGGCCTTTCCTTCAGTCTCTACTCCACACTTTGTC  400

seq1  TCTGTATTTCCTATAAACAGAAGAGATTCTGGCTTAAAATTTTGGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTCCTATAAACAGAAGAGATTCTGGCTTAAAATTTTGGAGATG  450

seq1  AGTGAGTTGACCCATCCCTCATCCAGTGGATGTGCCTAACCTCTGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTGACCCATCCCTCATCCAGTGGATGTGCCTAACCTCTGGATAT  500

seq1  TTAACCATGTTTTCTATTGAAAGCAGACACACACTCAGAGAAGGGTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCATGTTTTCTATTGAAAGCAGACACACACTCAGAGAAGGGTATTC  550

seq1  AAAGCCCATGAATAGACAGTTTCCTCAGGGGAAAAGAGACCCAAAGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCATGAATAGACAGTTTCCTCAGGGGAAAAGAGACCCAAAGGATC  600

seq1  TGTGATGACAGTTTATATAGCAGAAAGAAAGCTTTTATGTGCTTATGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGACAGTTTATATAGCAGAAAGAAAGCTTTTATGTGCTTATGGGT  650

seq1  AGGATGAGTTTCTGCTTCACTTCAGAACTACTTAGTTTGGGTTATCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGTTTCTGCTTCACTTCAGAACTACTTAGTTTGGGTTATCATGA  700

seq1  AGGTAGGGGGAGTATTGGATAATCCAGACAAAGAACTGAAAATTGGATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGGGGAGTATTGGATAATCCAGACAAAGAACTGAAAATTGGATCC  750

seq1  TACCAAAGAAGTCCTCCCTTCCCCCTTGTAGAATATCTGAAAGTCTCATG  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TACCAAAGAAGTCCTCCCTTCCCTCTTGTAGAATATCTGAAAGTCTCATG  800

seq1  CATTAGTTCCCTCCAGCAGGAGAAGCCCACAAACTCTCCCTCTTGATAAA  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTAGTTCCCTCCAGCAGGAGAAG-CCACAAACTCTCCCTCTTGATAAA  849

seq1  ATAGAAAAAGCAGGGAAACAGAAATTTTACATGCTTAAGTAAAAAAAAAT  900
      |||| ||||||| ||||||||||||||||||||||||||| |||||||||
seq2  ATAG-AAAAGCA-GGAAACAGAAATTTTACATGCTTAAGT-AAAAAAAAT  896

seq1  ACATTAAATGTACCTAGAACTTCCTTCTCTGTCTCTGCTTACTGAAG-AG  949
      ||||||||||||||||  |||||||||||||||||||| |||||||| ||
seq2  ACATTAAATGTACCTAAGACTTCCTTCTCTGTCTCTGC-TACTGAAGAAG  945

seq1  CTGTCTGACACCTACTTCCTTAAGTTGGTCAGTTCATTGAAAATACTTGG  999
      ||||||||   |||| ||||| |||  ||||| |||| ||||||||||||
seq2  CTGTCTGAACACTAC-TCCTT-AGT--GTCAG-TCATGGAAAATACTTGG  990

seq1  TAGATATTTATGGAAAAAGTGAATACTAGAATGTACTTTTTAAAAAAGTT  1049
      |||||||||||||||||||||||| ||||||||| |||||| |||||| |
seq2  TAGATATTTATGGAAAAAGTGAAT-CTAGAATGTTCTTTTT-AAAAAGGT  1038

seq1  ATCAGAATATAGAATAAAGATAC  1072
      ||| || ||| ||||||||||||
seq2  ATCTGATTAT-GAATAAAGATAC  1060


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