BAC Information

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BAC

Clone NameB6Ng01-205O20
Chromosome3 (Build37)
Map Location 10,853,707 - 10,854,832
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4, 1700008G05Rik, Impa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564
Downstream geneLOC383826, EG667978, LOC667999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205O20.bB6Ng01-205O20.g
ACCGA025476GA025477
length1,1251,138
definitionB6Ng01-205O20.b B6Ng01-205O20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatcctcataagtcattccagatagtaatggagccatttacaa
tgtgctctagtatccacatttgatctaattatctgtaagtaaataaataa
attaattaattaattaattaattttaaaaaaaggttgaatacctcttcca
ttctactgcatctcaatactgctgagtcaggtgatttgtcaaaaagttct
gttgattgtattagctacctaggggctgtttgtttttcagataaatttag
tattgttcttccaaggtctataaagaattgtgtcaggattttgatgggga
ttgcattaaatggaaactcccctgtatctatgagggttaccataactaag
actcttagcaatgagtgatagagaacctgaaataggcacctcatataacc
aggcaagacttccaatggagagatggggacaccaaccaagccacaaaacc
ttcagccctaaatttgtcatgccttctagatgtgtaggaataaagatgga
gcagaaattgaaggaatggccaacgaatgactggcccaacttgagaacca
agccttgaaagtagcatttatactctgctatacttgcagacaagagccta
gcaaaactgtcatctgagacttcactcagaaagtgacggaaacggatgca
gagacccatggccatacattaggcagaacgaggggaatcctgtggaagag
gggtgggggaagaatggagaatccagcagggtcaaggacaccataagaac
gccttcagaatctactaagctggtcccattgaagctcatagagactgaat
caccaaccagaaagcatgcttggggctagacttatgccctctgtacataa
cagatgtgcagctttggtcttcatgtaggaccttctaaccgcaggagtag
gagctgtcattgactctttctgccttggattctttccctttaactggggt
tcctttccaggctcagtatagaaatgcaccttggcatactgcaacttgat
atgccaaggctgattgatatccacgggaaggactcttcttttcttgaaag
aacagggagatggaattgagctacggaagaagatggcatggcaatggtaa
agacaaatgacgcagctgctgggtc
gaattccatggaatgctgaggaagcaagtgccaggtccacgtagctatga
ctgaagacagagctgcctcaagggtgtggttgaagtaaaaacagtctcca
acacatatggatgggcaagtatgttcagttttaatttatccagcaactac
tctaaatagaaagatggctattttgttaaattttcttaaagcaattaagt
tttgctttaagagatactaagtaatatgaagaaaagaacccagtgtttag
gaatttgttaattttcttcttaatttatttaattgaaaatagactttttc
ctcacataatatatccttattacagtttcccttccctctactcttcacaa
ctcctccctatctccccttccacctggatctgtcccctttctgtctctca
ttagaaaacaaacaggctaccagggaataatagtgaaataacatataaca
taataagataaaacaaacacattagcataggacaatataaacattcataa
ggaaaggatctcaagaaaaagcacaagtaagagatataagtgcagaaacc
cacacagtcagaaattccttaataatacaaagctgaaatatataatctat
atcaaagaacctggaaggtaaaaagagaactatatgcaaacttttaaaaa
ttatataagctctgacatgacattatgagacaaggaacatcaattgagtt
tgtttgtttgtttgtttctgctgatatcttactgctgggtataaaaccca
ccccttaaggataatctgtttcctcagtgagacttccctagaggaaacta
aacttttatttgcaaattgttatcagttggtgataggtgcatctggcaaa
tttttgaagcagatatgaagaactttaatgtgcatgtagtcaatgatgtt
gacttagtgctaccaggcctaatattgtgatatttttcccacatcttatg
aaaataccattcccagtgaagacttctctttttattctcatgaccttgga
ttttgagctaataaattgaacaaatgctgggggtatccagtcttaaatct
tggctcaccccacccctgtccattagtaatgccccagggcagagtctccc
aattggggcacttggtatgaacccttctaatttccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10853707_10854832
seq2: B6Ng01-205O20.g_72_1209

seq1  GAATTCCATGGAATGCTGAGGAAGCAAGTGCCAGGTCCACGTAGCTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGAATGCTGAGGAAGCAAGTGCCAGGTCCACGTAGCTATGA  50

seq1  CTGAAGACAGAGCTGCCTCAAGGGTGTGGTTGAAGTAAAAACAGTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACAGAGCTGCCTCAAGGGTGTGGTTGAAGTAAAAACAGTCTCCA  100

seq1  ACACATATGGATGGGCAAGTATGTTCAGTTTTAATTTATCCAGCAACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGGATGGGCAAGTATGTTCAGTTTTAATTTATCCAGCAACTAC  150

seq1  TCTAAATAGAAAGATGGCTATTTTGTTAAATTTTCTTAAAGCAATTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAGAAAGATGGCTATTTTGTTAAATTTTCTTAAAGCAATTAAGT  200

seq1  TTTGCTTTAAGAGATACTAAGTAATATGAAGAAAAGAACCCAGTGTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTAAGAGATACTAAGTAATATGAAGAAAAGAACCCAGTGTTTAG  250

seq1  GAATTTGTTAATTTTCTTCTTAATTTATTTAATTGAAAATAGACTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTTAATTTTCTTCTTAATTTATTTAATTGAAAATAGACTTTTTC  300

seq1  CTCACATAATATATCCTTATTACAGTTTCCCTTCCCTCTACTCTTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATAATATATCCTTATTACAGTTTCCCTTCCCTCTACTCTTCACAA  350

seq1  CTCCTCCCTATCTCCCCTTCCACCTGGATCTGTCCCCTTTCTGTCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCTATCTCCCCTTCCACCTGGATCTGTCCCCTTTCTGTCTCTCA  400

seq1  TTAGAAAACAAACAGGCTACCAGGGAATAATAGTGAAATAACATATAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAACAAACAGGCTACCAGGGAATAATAGTGAAATAACATATAACA  450

seq1  TAATAAGATAAAACAAACACATTAGCATAGGACAATATAAACATTCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGATAAAACAAACACATTAGCATAGGACAATATAAACATTCATAA  500

seq1  GGAAAGGATCTCAAGAAAAAGCACAAGTAAGAGATATAAGTGCAGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATCTCAAGAAAAAGCACAAGTAAGAGATATAAGTGCAGAAACC  550

seq1  CACACAGTCAGAAATTCCTTAATAATACAAAGCTGAAATATATAATCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTCAGAAATTCCTTAATAATACAAAGCTGAAATATATAATCTAT  600

seq1  ATCAAAGAACCTGGAAGGTAAAAAGAGAACTATATGCAAACTTTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAACCTGGAAGGTAAAAAGAGAACTATATGCAAACTTTTAAAAA  650

seq1  TTATATAAGCTCTGACATGACATTATGAGACAAGGAACATCAATTGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGCTCTGACATGACATTATGAGACAAGGAACATCAATTGAGTT  700

seq1  TGTTTGTTTGTTTGTTTCTGCTGATATC-TACTGCTGGGTATAAAACCCA  749
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTCTGCTGATATCTTACTGCTGGGTATAAAACCCA  750

seq1  -CCCTTAAGGATAATCTGTTTCCTCAGTGAGACTTCCCTAGAGGAAACTA  798
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTAAGGATAATCTGTTTCCTCAGTGAGACTTCCCTAGAGGAAACTA  800

seq1  AACTTTTATTTGCAAATTGTTATCAGTTGGTGATAGGTGCATCTGGCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATTTGCAAATTGTTATCAGTTGGTGATAGGTGCATCTGGCAAA  850

seq1  -TTTTGAAGCAGATTATGAAGAACTTTAATGTGCATGTAGTCAATGATGT  897
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAGCAGA-TATGAAGAACTTTAATGTGCATGTAGTCAATGATGT  899

seq1  GAACTTAGTGCTACCAGG-CTAATA-TGTGATA-TTTTCCCACATC-TAT  943
        |||||||||||||||| |||||| ||||||| |||||||||||| |||
seq2  TGACTTAGTGCTACCAGGCCTAATATTGTGATATTTTTCCCACATCTTAT  949

seq1  GAAAATACCA-TCCCAGTGAAGACCTACTCTTTTTATTCTTCATGA-CTT  991
      |||||||||| |||||||||||| || |||||||||||| |||||| |||
seq2  GAAAATACCATTCCCAGTGAAGA-CTTCTCTTTTTATTC-TCATGACCTT  997

seq1  TGATTTTGAGCTAATAAAATGAACAAAATGCT-GGGGTA-CCAGTCATAA  1039
       ||||||||||||||||| ||||| ||||||| |||||| |||||| |||
seq2  GGATTTTGAGCTAATAAATTGAAC-AAATGCTGGGGGTATCCAGTCTTAA  1046

seq1  TATCTTTGC-CACCC--ACCCTGTCCATTAGTTATG-CCCAGGGCAGAG-  1084
       ||||| || |||||   |||||||||||||| ||| |||||||||||| 
seq2  -ATCTTGGCTCACCCCACCCCTGTCCATTAGTAATGCCCCAGGGCAGAGT  1095

seq1  CTCCCA--TTGGGCAC-TAGAATTGACCCTTCTTTATTTTCCTTC  1126
      ||||||  | |||||| | | ||  |||||||  || ||||||||
seq2  CTCCCAATTGGGGCACTTGGTATGAACCCTTC--TAATTTCCTTC  1138