BAC Information

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BAC

Clone NameB6Ng01-205P14
Chromosome3 (Build37)
Map Location 52,283,686 - 52,409,034
singlet/doubletdoublet
Overlap genenone
Upstream geneRab33b, Setd7, LOC100039684, Mgst2, Maml3, LOC433587, LOC100039788, LOC671890, Olfr1398-ps1, Foxo1
Downstream geneLOC100039762, LOC100039832, Cog6, Lhfp, LOC100039808, LOC666413, 8030451K01Rik, 2810046L04Rik, Stoml3, Frem2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205P14.bB6Ng01-205P14.g
ACCGA025512GA025513
length682624
definitionB6Ng01-205P14.b B6Ng01-205P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,283,686 - 52,284,367)(52,408,411 - 52,409,034)
sequence
gaattcccaccttgataactccatgaaggcaaggcactgggcatctcaaa
agcttgctagaggattgtcagttgctcagctagctcacaaagacagctct
taaacagcagagagaaactaccatctaatttgttaggtcctgctttattt
aatggcactcaaagatggggacagtaattggtaagcatgcctgtatttag
atgtggaaaaaaaggtggtggtggggatttttctgggtttactgactagt
cccattttctttcttcctctctctctctctctctctctctctctctctct
ctctctctccccccctcttctgtgataaacaccatgaccaaagcaacttg
ggaatgaatggattccctctcataggctatagtctattacctagaaaatg
taaggcagacacacacaaggtaggagtcagaagcagaaaaccatggagga
acattgcttattggcttgctcccaggctcatgcccagctagttttcttgt
gcatctaaggtctaccagcttagggatggtaccacccacagagaactgag
ccctcctacatcaattagcaatcaagaaaatgccagggctggagagatgg
ctcagtgtttaagagcactgactgttcttccagaagtcctgagttcaatt
cccagcaaccacatggtggctcacaatcatct
gaattctgggaatttgggagggatcctgttcagcatcttggaagaaggga
cttgctagtttgacatcatttgagatccagcagtctgcagatatagctca
gttgctttccgagcacacaaatccctggcacctcataaaaatggtcatgg
tggggtaaggacatcccggataaggacacaggagaaccggaagttcaaag
ccattgtcagctatatagaaaaatataggtcacccagggagacacgaaac
ctggtctgaaagcctgcaggtaggagtctggggacttgaaattgctcagt
ggactagtggataaacacgtgacaataaagagtgaagaccacagttcaga
tccccaagacctttgtacaataaacaggcagtggaggtctgtgatactaa
cattcaaggaggtagagatttaggatcccagagcaagctgacgagctagg
ctagtcagaactgatgagctctgggttctcaataaacaaaatggaaagca
atcagggaagatacttagtgtcaactctaggtctccacagtcacacacac
acacacacacacacacacacacacacacacgagggcacacaagtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_52283686_52284367
seq2: B6Ng01-205P14.b_49_730

seq1  GAATTCCCACCTTGATAACTCCATGAAGGCAAGGCACTGGGCATCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACCTTGATAACTCCATGAAGGCAAGGCACTGGGCATCTCAAA  50

seq1  AGCTTGCTAGAGGATTGTCAGTTGCTCAGCTAGCTCACAAAGACAGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTAGAGGATTGTCAGTTGCTCAGCTAGCTCACAAAGACAGCTCT  100

seq1  TAAACAGCAGAGAGAAACTACCATCTAATTTGTTAGGTCCTGCTTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGCAGAGAGAAACTACCATCTAATTTGTTAGGTCCTGCTTTATTT  150

seq1  AATGGCACTCAAAGATGGGGACAGTAATTGGTAAGCATGCCTGTATTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCACTCAAAGATGGGGACAGTAATTGGTAAGCATGCCTGTATTTAG  200

seq1  ATGTGGAAAAAAAGGTGGTGGTGGGGATTTTTCTGGGTTTACTGACTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAAAAAAGGTGGTGGTGGGGATTTTTCTGGGTTTACTGACTAGT  250

seq1  CCCATTTTCTTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTCTTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  300

seq1  CTCTCTCTCCCCCCCTCTTCTGTGATAAACACCATGACCAAAGCAACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCCCCCCCTCTTCTGTGATAAACACCATGACCAAAGCAACTTG  350

seq1  GGAATGAATGGATTCCCTCTCATAGGCTATAGTCTATTACCTAGAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATGGATTCCCTCTCATAGGCTATAGTCTATTACCTAGAAAATG  400

seq1  TAAGGCAGACACACACAAGGTAGGAGTCAGAAGCAGAAAACCATGGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGACACACACAAGGTAGGAGTCAGAAGCAGAAAACCATGGAGGA  450

seq1  ACATTGCTTATTGGCTTGCTCCCAGGCTCATGCCCAGCTAGTTTTCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTTATTGGCTTGCTCCCAGGCTCATGCCCAGCTAGTTTTCTTGT  500

seq1  GCATCTAAGGTCTACCAGCTTAGGGATGGTACCACCCACAGTGAACTGAG  550
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCATCTAAGGTCTACCAGCTTAGGGATGGTACCACCCACAGAGAACTGAG  550

seq1  CCCTCCTACATCAATTAGCAATCAAGAAAATGCCAGGGCTGGAGAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTACATCAATTAGCAATCAAGAAAATGCCAGGGCTGGAGAGATGG  600

seq1  CTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAAGTCCTGAGTTCAATT  650
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTTTAAGAGCACTGACTGTTCTTCCAGAAGTCCTGAGTTCAATT  650

seq1  CCCAGCAACCACATGGTGGCTCACAACCATCT  682
      |||||||||||||||||||||||||| |||||
seq2  CCCAGCAACCACATGGTGGCTCACAATCATCT  682

seq1: chr3_52408411_52409034
seq2: B6Ng01-205P14.g_65_688 (reverse)

seq1  ACACACACACACACACACACACACACACACACTTGTGTGCCCTCGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACTTGTGTGCCCTCGTGTGT  50

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGGAGACCTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGGAGACCTAGAG  100

seq1  TTGACACTAAGTATCTTCCCTGATTGCTTTCCATTTTGTTTATTGAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACTAAGTATCTTCCCTGATTGCTTTCCATTTTGTTTATTGAGAAC  150

seq1  CCAGAGCTCATCAGTTCTGACTAGCCTAGCTCGTCAGCTTGCTCTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTCATCAGTTCTGACTAGCCTAGCTCGTCAGCTTGCTCTGGGAT  200

seq1  CCTAAATCTCTACCTCCTTGAATGTTAGTATCACAGACCTCCACTGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATCTCTACCTCCTTGAATGTTAGTATCACAGACCTCCACTGCCTG  250

seq1  TTTATTGTACAAAGGTCTTGGGGATCTGAACTGTGGTCTTCACTCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTACAAAGGTCTTGGGGATCTGAACTGTGGTCTTCACTCTTTAT  300

seq1  TGTCACGTGTTTATCCACTAGTCCACTGAGCAATTTCAAGTCCCCAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACGTGTTTATCCACTAGTCCACTGAGCAATTTCAAGTCCCCAGACT  350

seq1  CCTACCTGCAGGCTTTCAGACCAGGTTTCGTGTCTCCCTGGGTGACCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGCAGGCTTTCAGACCAGGTTTCGTGTCTCCCTGGGTGACCTAT  400

seq1  ATTTTTCTATATAGCTGACAATGGCTTTGAACTTCCGGTTCTCCTGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTATATAGCTGACAATGGCTTTGAACTTCCGGTTCTCCTGTGTC  450

seq1  CTTATCCGGGATGTCCTTACCCCACCATGACCATTTTTATGAGGTGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCGGGATGTCCTTACCCCACCATGACCATTTTTATGAGGTGCCAG  500

seq1  GGATTTGTGTGCTCGGAAAGCAACTGAGCTATATCTGCAGACTGCTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGTGTGCTCGGAAAGCAACTGAGCTATATCTGCAGACTGCTGGAT  550

seq1  CTCAAATGATGTCAAACTAGCAAGTCCCTTCTTCCAAGATGCTGAACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGATGTCAAACTAGCAAGTCCCTTCTTCCAAGATGCTGAACAGG  600

seq1  ATCCCTCCCAAATTCCCAGAATTC  624
      ||||||||||||||||||||||||
seq2  ATCCCTCCCAAATTCCCAGAATTC  624