BAC Information

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BAC

Clone NameB6Ng01-206C19
Chromosome3 (Build37)
Map Location 150,100,070 - 150,101,196
singlet/doubletsinglet
Overlap geneLOC100040455
Upstream geneLOC100040620, LOC100040633
Downstream geneLOC100040463, LOC623554, Eltd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206C19.g
ACCGA025658
length1,125
definitionB6Ng01-206C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagggcaccaggaaaatgagagtattgagacttgaatactttc
ctctgatctccacatacttgccatggcacagcatgtccacacttgcacac
acatgtcttaccccaacttatttctatcttataactcatatgcattttct
ctatgtcactctttcttattcatactaattaacaatactataattaaagt
attgcttattctttgaaaaatatataatatctactatatataataaaagt
atatatacatttatatatatgtgtatacacacacacacacacacacacac
acacacacacacacacacacacacacacatgaaaggaactgagtgctgca
ccagcttgtaaaactcaacttcacaccaaagaacctctttatgactcctg
gatgaagaaaaaaatattttctgatataaatcaaatgctaaactaggagg
actctttgggaaacaaaacaatgaacatctcagattgcttatcattttgt
aggggcaatgatcatctcgttgcaacaaagggaaaataagtttattcttt
gggtgtggtgatatagtttaaactgtttgctttgggacaccctgaaaatt
taaaatgaattgtggtgctatgaatggagttccagaatgcaccagagacc
tgggaggtgagagactctcaggactcaaaagaagggaccttagaagaaat
gcccaacagactggagagggaaattatagaacccacctccagtaggaaga
cagggcatcaagtgagggattgggttgccatcccataatcagaactttaa
cccatatttgtttctgtctgaaagatctgcagaaatggaaatggagagga
gcctgaggaaaagaggtccagcaagatgttcaagtgggatccagctcaag
gggaggtcccaagccttgacactattactgaggctatggagctctcacaa
aaaaagggatcctatcatgattgtactctgggagacacaccaaagcagct
gaagagtcagatgcagctatttgcaatcaacgaataagacaggagcacta
cctcctggtggttaaataaggaaagggctgaagagctgatgaggaagcac
cctagttaggaggacgtcttcaatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150100070_150101196
seq2: B6Ng01-206C19.g_67_1191

seq1  GAATTCACAGGGCACCAGGAAAATGAGAGTATTGAGACTTGAATACTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGGCACCAGGAAAATGAGAGTATTGAGACTTGAATACTTTC  50

seq1  CTCTGATCTCCACATACTTGCCATGGCACAGCATGTCCACACTTGCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATCTCCACATACTTGCCATGGCACAGCATGTCCACACTTGCACAC  100

seq1  ACATGTCTTACCCCAACTTATTTCTATCTTATAACTCATATGCATTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTTACCCCAACTTATTTCTATCTTATAACTCATATGCATTTTCT  150

seq1  CTATGTCACTCTTTCTTATTCATACTAATTAACAATACTATAATTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCACTCTTTCTTATTCATACTAATTAACAATACTATAATTAAAGT  200

seq1  ATTGCTTATTCTTTGAAAAATATATAATATCTACTATATATAATAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATTCTTTGAAAAATATATAATATCTACTATATATAATAAAAGT  250

seq1  ATATATACATTTATATATATGTGTATACACACACACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATTTATATATATGTGTATACACACACACACACACACACACAC  300

seq1  ACACACACACACACACACACACACACACATGAAAGGAACTGAGTGCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATGAAAGGAACTGAGTGCTGCA  350

seq1  CCAGCTTGTAAAACTCAACTTCACACCAAAGAACCTCTTTATGACTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGTAAAACTCAACTTCACACCAAAGAACCTCTTTATGACTCCTG  400

seq1  GATGAAGAAAAAAATATTTTCTGATATAAATCAAATGCTAAACTAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGAAAAAAATATTTTCTGATATAAATCAAATGCTAAACTAGGAGG  450

seq1  ACTCTTTGGGAAACAAAACAATGAACATCTCAGATTGCTTATCATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGGGAAACAAAACAATGAACATCTCAGATTGCTTATCATTTTGT  500

seq1  AGGGGCAATGATCATCTCGTTGCAACAAAGGGAAAATAAGTTTATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAATGATCATCTCGTTGCAACAAAGGGAAAATAAGTTTATTCTTT  550

seq1  GGGTGTGGTGATATAGTTTAAACTGTTTGCTTTGGGACACCCTGAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGTGATATAGTTTAAACTGTTTGCTTTGGGACACCCTGAAAATT  600

seq1  TAAAATGAATTGTGGTGCTATGAATGGAGTTCCAGAATGCACCAGAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAATTGTGGTGCTATGAATGGAGTTCCAGAATGCACCAGAGACC  650

seq1  TGGGAGGTGAGAGACTCTCAGGACTCAAAAGAAGGGACCTTAGAAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTGAGAGACTCTCAGGACTCAAAAGAAGGGACCTTAGAAGAAAT  700

seq1  GCCCAACAGACTGGAGAGGGAAATTATAGAACCCACCTCCAGTAGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACAGACTGGAGAGGGAAATTATAGAACCCACCTCCAGTAGGAAGA  750

seq1  CAGGGCATCAAGTGAGGGATTGGGTTGCCATCCCATAATCAGAACTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATCAAGTGAGGGATTGGGTTGCCATCCCATAATCAGAACTTTAA  800

seq1  CCCATATTTGTTTCTGTCTGAAAGATCTGCAGAAATGGAAATGGAGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTGTTTCTGTCTGAAAGATCTGCAGAAATGGAAATGGAGAGGA  850

seq1  GCCTGAGGAAAAGAAGGTCCAGCAAGATGTTCAAAGTGGGATCCAGCTCA  900
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  GCCTGAGGAAAAG-AGGTCCAGCAAGATGTTC-AAGTGGGATCCAGCTCA  898

seq1  AGGGGAGGTCCCAAGCCCTGACACTATTACTGAGGCTATGGAGCTCTCAC  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGGGAGGTCCCAAGCCTTGACACTATTACTGAGGCTATGGAGCTCTCAC  948

seq1  AAAAAAAGGGA-CCTATCATGATTGTACTCTGGAAGACACACC-AAGCAG  998
      ||||||||||| ||||||||||||||||||||| ||||||||| ||||||
seq2  AAAAAAAGGGATCCTATCATGATTGTACTCTGGGAGACACACCAAAGCAG  998

seq1  CTGAAAGAGTCAGATGCAGCTATTTGCATCCAACGAAT-AGACAGAAGCA  1047
      ||| ||||||||||||||||||||||||  |||||||| |||||| ||| 
seq2  CTG-AAGAGTCAGATGCAGCTATTTGCAATCAACGAATAAGACAGGAGC-  1046

seq1  ACTAACCCCT-GTGGTTAAATTAAGGAAA-GGCTGAAAGAAGCTGATGAG  1095
      |||| | ||| ||||||||| |||||||| |||||||   ||||||||||
seq2  ACTACCTCCTGGTGGTTAAA-TAAGGAAAGGGCTGAA--GAGCTGATGAG  1093

seq1  GAAGGCAACCCAG-TAGGAGGACAGTC-TCAATT  1127
      ||| ||| || || ||||||||| ||| ||||||
seq2  GAA-GCACCCTAGTTAGGAGGAC-GTCTTCAATT  1125


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