BAC Information

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BAC

Clone NameB6Ng01-207B02
Chromosome3 (Build37)
Map Location 134,536,642 - 134,707,570
singlet/doubletdoublet
Overlap geneTacr3, LOC229837
Upstream geneLOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234
Downstream geneLOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207B02.bB6Ng01-207B02.g
ACCGA026317GA026318
length7051,088
definitionB6Ng01-207B02.b B6Ng01-207B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,706,866 - 134,707,570)(134,536,642 - 134,537,719)
sequence
gaattccatcttttctcttaatctgacattgatagtacacttactaaaat
atttctagtataaatgaacaagaaagtgagtaaaattctgttctaaagct
acagcgaatactgaaagggagaataagaaatagtgagtgttttacattct
gataaaatttgccccagagtcactaaaaatttggatcagcactttgcata
ttcagtttccaagatacacaaggaaaggtctttggaagaatgatagatgt
tagaacaggaacttcagcagcaagtgttgtgtttgtggtaggacattctc
ttttcttctggaagcaaggaggatgagctgaaggccaaagagaaagaata
gattgaaagtagacttgtgtgcaagaaaaaagcctggtctttcatgctaa
gagggtgaccttgactgacccacccttatttatttatttttaacaaatcg
ggataaacaaacactatagtaggaggggaaaaaattgagcaaatttgtga
agatgtctagggctctcataaatctaacaatgacagccagggttaattta
agttcactgaccatatgcatctaaaagggtgggtggccaggattatgcaa
ggctggttgggtacaaggctaagatatgttgaaaaaaaaatgtatctaca
attagattacttcacttcatttactgtggagaatctacgtacgtacgtgt
gtgtg
gaattctttgtttagctctgtacgccccccccccgacataatagggtcta
cctgagtccccactcccactggaaagagccagttagctgcttcaaagctt
tggggctcggtttgagaaacaatctctgtctctccctgggttgtaccatg
agcataaattactgagaaggcatatctgggatcagtacagaaagttaatg
tcttcccttttattaatttaagtgtttttaagtctgagattttatttcag
ctgaaatgctggaggatcagaagcttttgcctcagtatgaagacaccact
gcataatcaacccaatgtgggccattaattataaaattattctagctgac
aaccatacattttaacatcttcacaggcttattctgaatatccatttagt
ttgaatttgccaaatttatgagttcttggaaatgatgcattagcagctct
gatgacatctcattaactgttaagcaaggttttactgtctagggaggact
ggagcagatatctggatcagatactgctaccttcagctgcttgagaacat
tagctgggtgtgatgtcataactgccctgtaagggaaggaagcatctgag
aagtgggcactcagcaacaggaaaactcttagctgtaagacttttgagcc
aattttacaagtcagaggctcaacaaaccatttaacttgcctctcttgct
atccctcaacactgtgttccctctctgttgtgtgtcctttttggtagtca
acatagagtatgtgtttctaaaattgagtagtggtatcatttttttattt
tatttatttattgttttgtttgagatagtttctttttttttaattagatg
ttttccttatttacatttcaaatgttatacccttacctgggtttcactct
gaaacctcctattcccctatcccctccccttactcacaaccattggttat
tactttttaacaagtattatggtatatggaaagtcccaggactctttcac
tagagatccacatttgggctaagctacggtaatggggtagcccttgttct
cctcatccacatcactggtatctgccttaaggaaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134706866_134707570
seq2: B6Ng01-207B02.b_48_752 (reverse)

seq1  CACACACACGTACGTACGTAGATTCTCCACAGTAAATGAAGTGAAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACGTACGTACGTAGATTCTCCACAGTAAATGAAGTGAAGTAAT  50

seq1  CTAATTGTAGATACATTTTTTTTTCAACATATCTTAGCCTTGTACCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTAGATACATTTTTTTTTCAACATATCTTAGCCTTGTACCCAAC  100

seq1  CAGCCTTGCATAATCCTGGCCACCCACCCTTTTAGATGCATATGGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGCATAATCCTGGCCACCCACCCTTTTAGATGCATATGGTCAGT  150

seq1  GAACTTAAATTAACCCTGGCTGTCATTGTTAGATTTATGAGAGCCCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAAATTAACCCTGGCTGTCATTGTTAGATTTATGAGAGCCCTAGA  200

seq1  CATCTTCACAAATTTGCTCAATTTTTTCCCCTCCTACTATAGTGTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCACAAATTTGCTCAATTTTTTCCCCTCCTACTATAGTGTTTGTT  250

seq1  TATCCCGATTTGTTAAAAATAAATAAATAAGGGTGGGTCAGTCAAGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCGATTTGTTAAAAATAAATAAATAAGGGTGGGTCAGTCAAGGTCA  300

seq1  CCCTCTTAGCATGAAAGACCAGGCTTTTTTCTTGCACACAAGTCTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTAGCATGAAAGACCAGGCTTTTTTCTTGCACACAAGTCTACTTT  350

seq1  CAATCTATTCTTTCTCTTTGGCCTTCAGCTCATCCTCCTTGCTTCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATTCTTTCTCTTTGGCCTTCAGCTCATCCTCCTTGCTTCCAGAA  400

seq1  GAAAAGAGAATGTCCTACCACAAACACAACACTTGCTGCTGAAGTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGAATGTCCTACCACAAACACAACACTTGCTGCTGAAGTTCCTG  450

seq1  TTCTAACATCTATCATTCTTCCAAAGACCTTTCCTTGTGTATCTTGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACATCTATCATTCTTCCAAAGACCTTTCCTTGTGTATCTTGGAAA  500

seq1  CTGAATATGCAAAGTGCTGATCCAAATTTTTAGTGACTCTGGGGCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATGCAAAGTGCTGATCCAAATTTTTAGTGACTCTGGGGCAAATT  550

seq1  TTATCAGAATGTAAAACACTCACTATTTCTTATTCTCCCTTTCAGTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGAATGTAAAACACTCACTATTTCTTATTCTCCCTTTCAGTATTC  600

seq1  GCTGTAGCTTTAGAACAGAATTTTACTCACTTTCTTGTTCATTTATACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGCTTTAGAACAGAATTTTACTCACTTTCTTGTTCATTTATACTA  650

seq1  GAAATATTTTAGTAAGTGTACTATCAATGTCAGATTAAGAGAAAAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTTTAGTAAGTGTACTATCAATGTCAGATTAAGAGAAAAGATGG  700

seq1  AATTC  705
      |||||
seq2  AATTC  705

seq1: chr3_134536642_134537719
seq2: B6Ng01-207B02.g_65_1152

seq1  GAATTCTTTGTTTAGCTCTGTACGCCCCCCCCCCGACATAATAGGGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACGCCCCCCCCCCGACATAATAGGGTCTA  50

seq1  CCTGAGTCCCCACTCCCACTGGAAAGAGCCAGTTAGCTGCTTCAAAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCCCCACTCCCACTGGAAAGAGCCAGTTAGCTGCTTCAAAGCTT  100

seq1  TGGGGCTCGGTTTGAGAAACAATCTCTGTCTCTCCCTGGGTTGTACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTCGGTTTGAGAAACAATCTCTGTCTCTCCCTGGGTTGTACCATG  150

seq1  AGCATAAATTACTGAGAAGGCATATCTGGGATCAGTACAGAAAGTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAATTACTGAGAAGGCATATCTGGGATCAGTACAGAAAGTTAATG  200

seq1  TCTTCCCTTTTATTAATTTAAGTGTTTTTAAGTCTGAGATTTTATTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTTTTATTAATTTAAGTGTTTTTAAGTCTGAGATTTTATTTCAG  250

seq1  CTGAAATGCTGGAGGATCAGAAGCTTTTGCCTCAGTATGAAGACACCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGCTGGAGGATCAGAAGCTTTTGCCTCAGTATGAAGACACCACT  300

seq1  GCATAATCAACCCAATGTGGGCCATTAATTATAAAATTATTCTAGCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATCAACCCAATGTGGGCCATTAATTATAAAATTATTCTAGCTGAC  350

seq1  AACCATACATTTTAACATCTTCACAGGCTTATTCTGAATATCCATTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACATTTTAACATCTTCACAGGCTTATTCTGAATATCCATTTAGT  400

seq1  TTGAATTTGCCAAATTTATGAGTTCTTGGAAATGATGCATTAGCAGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTGCCAAATTTATGAGTTCTTGGAAATGATGCATTAGCAGCTCT  450

seq1  GATGACATCTCATTAACTGTTAAGCAAGGTTTTACTGTCTAGGGAGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATCTCATTAACTGTTAAGCAAGGTTTTACTGTCTAGGGAGGACT  500

seq1  GGAGCAGATATCTGGATCAGATACTGCTACCTTCAGCTGCTTGAGAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGATATCTGGATCAGATACTGCTACCTTCAGCTGCTTGAGAACAT  550

seq1  TAGCTGGGTGTGATGTCATAACTGCCCTGTAAGGGAAGGAAGCATCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGGTGTGATGTCATAACTGCCCTGTAAGGGAAGGAAGCATCTGAG  600

seq1  AAGTGGGCACTCAGCAACAGGAAAACTCTTAGCTGTAAGACTTTTGAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCACTCAGCAACAGGAAAACTCTTAGCTGTAAGACTTTTGAGCC  650

seq1  AATTTTACAAGTCAGAGGCTCAACAAACCATTTAACTTGCCTCTCTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACAAGTCAGAGGCTCAACAAACCATTTAACTTGCCTCTCTTGCT  700

seq1  ATCCCTCAACACTGTGTTCCCTCTCTGTTGTGTGTCCTTTTTGGTAGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCAACACTGTGTTCCCTCTCTGTTGTGTGTCCTTTTTGGTAGTCA  750

seq1  ACATAGAGTATGTGTTTCTAAAATTGAGTAGTGGTATCATTTTTTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGTATGTGTTTCTAAAATTGAGTAGTGGTATCATTTTTTTATTT  800

seq1  TATTTATTTATTGTTTTGTTTGAGATAGTTTCTTTTTTTTTAATTAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTGTTTTGTTTGAGATAGTTTCTTTTTTTTTAATTAGATG  850

seq1  TTTTCTTTATTTACATTTCAAATGTTATACCCTTACCT-GGTTTCACTCT  899
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTCCTTATTTACATTTCAAATGTTATACCCTTACCTGGGTTTCACTCT  900

seq1  GAAAACCTCCTA-TCCCCTATCCCCTCCCCCTACTCACCAACCCATTGG-  947
      | |||||||||| ||||||||||||||||| |||||||  | ||||||| 
seq2  G-AAACCTCCTATTCCCCTATCCCCTCCCCTTACTCAC--AACCATTGGT  947

seq1  TATTACTTTT--ACAAGTATTATGGTATTATGGTAAG--CCAGGACTC-T  992
      ||||||||||  ||||||||||||||| ||||| |||  ||||||||| |
seq2  TATTACTTTTTAACAAGTATTATGGTA-TATGGAAAGTCCCAGGACTCTT  996

seq1  TCACAGAAGATCCACA-TTGTGCTAAAGCAACGG-AATGGGG-AGCCCT-  1038
      ||||   ||||||||| ||| ||| |||| |||| ||||||| |||||| 
seq2  TCACTAGAGATCCACATTTGGGCT-AAGCTACGGTAATGGGGTAGCCCTT  1045

seq1  -GTCTC--CATCCACATCAATTGTATCTGCTTTAAGGAGAGAG  1078
        ||||  ||||||||||| | |||||||| ||||||| ||||
seq2  GTTCTCCTCATCCACATCACTGGTATCTGCCTTAAGGAAAGAG  1088