BAC Information

Click to search

BAC

Clone NameB6Ng01-207C08
Chromosome3 (Build37)
Map Location 38,229,766 - 38,230,857
singlet/doubletsinglet
Overlap genenone
Upstream geneFgf2, LOC100040649, Nudt6, Spata5, LOC665778, Spry1, EG381438, LOC100038875, LOC100041338, EG626367, 4930556A17Rik, LOC665811, EG665821, LOC100041366, LOC100040785
Downstream geneLOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824, Fat4, LOC100041432
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207C08.bB6Ng01-207C08.g
ACCGA026377GA026378
length1,1001,047
definitionB6Ng01-207C08.b B6Ng01-207C08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgataaaattatattcacagttgcactttaatcacgtttctatt
ttgcttctgaatgttatcataatttcaaagcttagatgatgatttgtatt
ttttaattttattttgcttttaggaaatggttttttttttcctcttactc
aatgaatggattttgatgaaaatggctttcagaaataattgtaaaagtta
gattcttatgcataatcataagccagccttttacattttaatgcaagctt
tccttcaatccatctgcctagctcaaaatgttactcacaattcaaacaaa
agtgctattaattaaaacaggacagggttcttgacataaacaataaatgc
agaaatattctaaacaaaacacaaagggatatctgatgtcctttgtggtc
tagccctacttgggctcagggcataattttaaatggtttgatatccaaca
acagcagtgaaggagtcattccaagttcccctttcccatgtataaataaa
tatttcatgagtatcagagtgtcagaaattcaatctcattccatatcctg
tcttttagagtcactgcctgtgccagtcagggaccacagcaacacagagc
agacaaatgaagaagagtgtgcagccacctgctgtgttcctttgtttcct
gtcccaccagaactcaggtctaatgagcctatctaggcccttgaaccagg
caaactgtcatggactatttttaaagcaaaaaatggtcttatcatctctg
ctgctatccatttgatgcaagagtcactagagtcacctttgggactgcag
tcctcaacacttggaggtggagacttcctttatgatacatccatccatct
ctgggtactactggaagctttctatggtttgagatgaaatttggaccttt
ttaaaagttgggaaattgcacttaattttagtctaagagagttgaaggga
taattaacttctttcttgaccttgaacactgtgggacttcatctagggta
actgagaaatcttgcattttatagcccttggtgattaatagtattatgta
tgggcaattactgcttttggtggactcatatatgaatacctgaacattaa

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggggacatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccccttttcatttctgattttgttga
ttaggattttgtccctttgccctctagtgagtctagctaagggtttatct
tatcttgttgattttctcaaagaaccaactcctcgtttggtttatttctt
tgaatagtcttcttgtttcccacttggttaattttcacccctgagtttga
ttatttccctgccgtctactcctcttgggtgaatttgcttcctttttttc
tagagcctttagatgtgttgtcaggcctgtctagtatgttgcttctcttc
ccgtttctttcttgggaggtacctcagagcttctgagttccctcttagaa
atgctttcatgtgttccaaaggtttgggtacgtggtggccttcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_38229766_38230857
seq2: B6Ng01-207C08.b_44_1142 (reverse)

seq1  TAATG-TCAGGTA-TCATA-ATGAGTC--ACAAAAGCAGTAATGCCCCAT  45
      ||||| ||||||| ||||| |||||||   |||||||||||||  |||||
seq2  TAATGTTCAGGTATTCATATATGAGTCCACCAAAAGCAGTAATTGCCCAT  50

seq1  AACATAATTACTTATTAATTCAACCAAAGGCTAT-AAATGCAAGATTTTC  94
       |||||| ||| |||||||   ||||| |||||| |||||||||| ||||
seq2  -ACATAA-TAC-TATTAAT--CACCAAGGGCTATAAAATGCAAGA-TTTC  94

seq1  TCAG-TACCCTAAGATGAAGTCCCACAGTGTTCAGGGTCAAG-AAGAGTT  142
      |||| |||||| |||||||||||||||||||||| ||||||| ||||  |
seq2  TCAGTTACCCT-AGATGAAGTCCCACAGTGTTCAAGGTCAAGAAAGAAGT  143

seq1  TAATT-TTCCTTC-ACTCTCTTAGACTAAAATTAAGTGCAATTTCCCAAC  190
      ||||| | ||||| ||||||||||||||||||||||||||||||||||||
seq2  TAATTATCCCTTCAACTCTCTTAGACTAAAATTAAGTGCAATTTCCCAAC  193

seq1  TTTT-AAAAGGT-CAAATTTCATCTCAAACCATAGAAAAGCTTCCAGTAG  238
      |||| ||||||| |||||||||||||||||||||| ||||||||||||||
seq2  TTTTAAAAAGGTCCAAATTTCATCTCAAACCATAG-AAAGCTTCCAGTAG  242

seq1  TACCCAGAGATGGATGGATGTATCAT-AAGGAAGTCTCCACCTCCAAGTG  287
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACCCAGAGATGGATGGATGTATCATAAAGGAAGTCTCCACCTCCAAGTG  292

seq1  TTGAGGACTGCAGTCCC-AAGGTGACTCTAGTGACTCTTGCATCAAATGG  336
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGAGGACTGCAGTCCCAAAGGTGACTCTAGTGACTCTTGCATCAAATGG  342

seq1  ATAGCAGCAGAGATGATAAGACCATTTTTTGCTTTAAAAATAGTCCATGA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGCAGAGATGATAAGACCATTTTTTGCTTTAAAAATAGTCCATGA  392

seq1  CAGTTTGCCTGGTTCAAGGGCCTAGATAGGCTCATTAGACCTGAGTTCTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCCTGGTTCAAGGGCCTAGATAGGCTCATTAGACCTGAGTTCTG  442

seq1  GTGGGACAGGAAAC-AAGGAACACAGCAGGTGGCTGCACACTCTTCTTCA  485
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGGGACAGGAAACAAAGGAACACAGCAGGTGGCTGCACACTCTTCTTCA  492

seq1  TTTGTCTGCTCTGTGTTGCTGTGGTCCCTGACTGGCACAGGCAGTGACTC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGCTCTGTGTTGCTGTGGTCCCTGACTGGCACAGGCAGTGACTC  542

seq1  TAAAAGACAGGATATGGAATGAGATTGAATTTCTGACACTCTGATACTCA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACAGGATATGGAATGAGATTGAATTTCTGACACTCTGATACTCA  592

seq1  TGAAATATTTATTTATACATGGGAAAGGGGAACTTGGAATGACTCCTTCA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTTATTTATACATGGGAAAGGGGAACTTGGAATGACTCCTTCA  642

seq1  CTGCTGTTGTTGGATATCAAACCATTTAAAATTATGCCCTGAGCCCAAGT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTGTTGGATATCAAACCATTTAAAATTATGCCCTGAGCCCAAGT  692

seq1  AGGGCTAGACCACAAAGGACATCAGATATCCCTTTGTGTTTTGTTTAGAA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAGACCACAAAGGACATCAGATATCCCTTTGTGTTTTGTTTAGAA  742

seq1  TATTTCTGCATTTATTGTTTATGTCAAGAACCCTGTCCTGTTTTAATTAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGCATTTATTGTTTATGTCAAGAACCCTGTCCTGTTTTAATTAA  792

seq1  TAGCACTTTTGTTTGAATTGTGAGTAACATTTTGAGCTAGGCAGATGGAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTTTTGTTTGAATTGTGAGTAACATTTTGAGCTAGGCAGATGGAT  842

seq1  TGAAGGAAAGCTTGCATTAAAATGTAAAAGGCTGGCTTATGATTATGCAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAAGCTTGCATTAAAATGTAAAAGGCTGGCTTATGATTATGCAT  892

seq1  AAGAATCTAACTTTTACAATTATTTCTGAAAGCCATTTTCATCAAAATCC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTAACTTTTACAATTATTTCTGAAAGCCATTTTCATCAAAATCC  942

seq1  ATTCATTGAGTAAGAGGAAAAAAAAAACCATTTCCTAAAAGCAAAATAAA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGAGTAAGAGGAAAAAAAAAACCATTTCCTAAAAGCAAAATAAA  992

seq1  ATTAAAAAATACAAATCATCATCTAAGCTTTGAAATTATGATAACATTCA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAATACAAATCATCATCTAAGCTTTGAAATTATGATAACATTCA  1042

seq1  GAAGCAAAATAGAAACGTGATTAAAGTGCAACTGTGAATATAATTTTATC  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAAATAGAAACGTGATTAAAGTGCAACTGTGAATATAATTTTATC  1092

seq1  AGAATTC  1092
      |||||||
seq2  AGAATTC  1099