BAC Information

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BAC

Clone NameB6Ng01-207E01
Chromosome3 (Build37)
Map Location 77,318,241 - 77,319,284
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E01.bB6Ng01-207E01.g
ACCGA026459GA026460
length1,1931,050
definitionB6Ng01-207E01.b B6Ng01-207E01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaggtggactccagaaaatcaaataatcccattaaaaaatg
gggctcagagctaaacaaagaattcctctcacctgaggaataccgaatgg
ctgagaagcacctgaaaaaatgctcaggatccttaatcatcagagaaatg
caaatcaaaacagctctgagattccacctcacaccagtcagaatggctaa
gatcaaaaattcaggtgacagcagatgctggtgaggatgtggagaaagag
gaacactcctccattgttggtgggattgcaggcttgtacaaccactctgg
aaatcagtctggcagttcctcagaaaattggacatagtactaccggagga
tcccgcaatacttctcctgggcatatatccagaagatgtcccaacttgta
agaaggacacatgctccactatgttcataacagccttatttataatagcc
agaagctggaaagaacccagatgcccctcaacaggggaatggatacaaaa
atgtggtacatttacacaatggagtactactctggtattaaaaagaatga
atttatgaaattcctaggcaaatggatagacctggagggcatcatcctga
gtgaggtaacacaatcacaaaagaactcaaatgatatgtactcactgata
agtggatattaacccagaaacttagtatacccgagatataagatacaatt
tgcaaaacacatgaaactgaagaagaacataaccaaagtgtgggcacttt
gccccttcttagaattggaaagaatcacccatggaaggagttacagaggc
aaagtttggagctgagacacaaggatggaccatctagagactgccatatc
cagggatccctcccataattagcctccaaacgatgacaccattacataca
ctagcaaccgttggctgaaaggaccctgatatagctgtctcttgtgagac
taggccggggcctagcaaacacataagtggatgctcacagtcagctattg
atggatcacaggccccgatgagagctagagaagtatcagagctaagagat
ctgcaccctgtagtgcaacagcatatgactacagttcccgagctctgact
ctagctgcaatgtatcaagttggctagtcgcattcctggcaagaagtcat
gaactgcacttaatgtcccagatcaagggaaatgtcacaagcg

gaattccatctgtggtgggaaggcaagttgacacacacattttgacatca
acatgccctaaaaaagaaatttgatttacaggaatataaatcagtttaca
aaactctaatattcttgtagaaaataaagttgtaatgctgaattcagtag
agaatgttttatcttaaaggtatttttaaaggctatctcatttggggtga
tgcattccaaatgataggaaatgaaatagcatgtggagtgaatacctgat
ttctgcatgtattataccatgggaatatttgcttacttggcctacatgca
acactagaggttgaacacaaaagtataaaagttttaatggataattaaaa
ggcatattggcttaaacttttaaagaccctttgtacatgcataactgaaa
acttgattgtaggttttctgtgcatagagctggtctttttatttaccaac
ctatggcttctaggagtaacagtatcatctgcaagtgtagcttcaattaa
actcttgtgtgttaaaagttgtgtatgtgtgtatgtttatacatgtgata
catatgtacaaacagaagctcatataaatgtatgttatgtaatagtatat
ttttatagactttacaaaatattcttagtgtttgttgtcctttctctcat
cccctcctctaccaaaacttatcatccattccccattttaacttccctaa
cactgttctcctgtggccctctgtgtcagcagtattatactattcttcaa
caggaaacatgctcttgaaatggaattaatgttaaaatagaaaatgtaac
cagtctaccaaagatgtaaatatgtatggtaaggaagtgaggtgggcaat
atgaaaacaaaaagaacataaaaatattaagacatttcttttacaattga
agccacatggagaagagagtaagaaatattaaaataggatcaaacataca
taacaaatgaccaatcttatttttcaaaaaataaataatcttgatttaat
tgtttttgaaattgtgcatcataggaaactaatgaagttgcagccaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77318241_77319284
seq2: B6Ng01-207E01.g_63_1112 (reverse)

seq1  GAATTTGCTGC-ACTTCATTTAGTTTCCTATGATGCACAATTTCAAAAAC  49
      ||||| ||||| |||||| |||||||||||||||||||||||||||||||
seq2  GAATTGGCTGCAACTTCA-TTAGTTTCCTATGATGCACAATTTCAAAAAC  49

seq1  AATTAAATCAAGATTATTTATTTTT--GAAAATAAGATTGGTCATTTGTT  97
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  AATTAAATCAAGATTATTTATTTTTTGAAAAATAAGATTGGTCATTTGTT  99

seq1  ATTGTATGTTTGATTCT-TTTTTATATTTCTTACTCTCTTCTCCATGTGG  146
      | |||||||||||| || |||| |||||||||||||||||||||||||||
seq2  A-TGTATGTTTGATCCTATTTTAATATTTCTTACTCTCTTCTCCATGTGG  148

seq1  CTTCAA-TGTAAA--GAATGTCTT-ATATTTTTATGTTCTTTTTGTTTTC  192
      |||||| ||||||   |||||||| |||||||||||||||||||||||||
seq2  CTTCAATTGTAAAAGAAATGTCTTAATATTTTTATGTTCTTTTTGTTTTC  198

seq1  ATATTGCCCACCTCACTTCCTTACCATACATATTTACATCTTTGGTAGAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCCCACCTCACTTCCTTACCATACATATTTACATCTTTGGTAGAC  248

seq1  TGGTTACATTTTCTATTTTAACATTAATTCCATTTCAAGAGCATGTTTCC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACATTTTCTATTTTAACATTAATTCCATTTCAAGAGCATGTTTCC  298

seq1  TGTTGAAGAATAGTATAATACTGCTGACACAGAGGGCCACAGGAGAACAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGAATAGTATAATACTGCTGACACAGAGGGCCACAGGAGAACAG  348

seq1  TGTTAGGGAAGTTAAAATGGGGAATGGATGATAAGTTTTGGTAGAGGAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGGAAGTTAAAATGGGGAATGGATGATAAGTTTTGGTAGAGGAGG  398

seq1  GGATGAGAGAAAGGACAACAAACACTAAGAATATTTTGTAAAGTCTATAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGAGAAAGGACAACAAACACTAAGAATATTTTGTAAAGTCTATAA  448

seq1  AAATATACTATTACATAACATACATTTATATGAGCTTCTGTTTGTACATA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACTATTACATAACATACATTTATATGAGCTTCTGTTTGTACATA  498

seq1  TGTATCACATGTATAAACATACACACATACACAACTTTTAACACACAAGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCACATGTATAAACATACACACATACACAACTTTTAACACACAAGA  548

seq1  GTTTAATTGAAGCTACACTTGCAGATGATACTGTTACTCCTAGAAGCCAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTGAAGCTACACTTGCAGATGATACTGTTACTCCTAGAAGCCAT  598

seq1  AGGTTGGTAAATAAAAAGACCAGCTCTATGCACAGAAAACCTACAATCAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGTAAATAAAAAGACCAGCTCTATGCACAGAAAACCTACAATCAA  648

seq1  GTTTTCAGTTATGCATGTACAAAGGGTCTTTAAAAGTTTAAGCCAATATG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGTTATGCATGTACAAAGGGTCTTTAAAAGTTTAAGCCAATATG  698

seq1  CCTTTTAATTATCCATTAAAACTTTTATACTTTTGTGTTCAACCTCTAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATTATCCATTAAAACTTTTATACTTTTGTGTTCAACCTCTAGT  748

seq1  GTTGCATGTAGGCCAAGTAAGCAAATATTCCCATGGTATAATACATGCAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATGTAGGCCAAGTAAGCAAATATTCCCATGGTATAATACATGCAG  798

seq1  AAATCAGGTATTCACTCCACATGCTATTTCATTTCCTATCATTTGGAATG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGTATTCACTCCACATGCTATTTCATTTCCTATCATTTGGAATG  848

seq1  CATCACCCCAAATGAGATAGCCTTTAAAAATACCTTTAAGATAAAACATT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCCAAATGAGATAGCCTTTAAAAATACCTTTAAGATAAAACATT  898

seq1  CTCTACTGAATTCAGCATTACAACTTTATTTTCTACAAGAATATTAGAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTGAATTCAGCATTACAACTTTATTTTCTACAAGAATATTAGAGT  948

seq1  TTTGTAAACTGATTTATATTCCTGTAAATCAAATTTCTTTTTTAGGGCAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACTGATTTATATTCCTGTAAATCAAATTTCTTTTTTAGGGCAT  998

seq1  GTTGATGTCAAAATGTGTGTGTCAACTTGCCTTCCCACCACAGATGGAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGTCAAAATGTGTGTGTCAACTTGCCTTCCCACCACAGATGGAAT  1048

seq1  TC  1044
      ||
seq2  TC  1050


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