BAC Information

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BAC

Clone NameB6Ng01-207J18
Chromosome3 (Build37)
Map Location 82,775,891 - 82,776,639
singlet/doubletsinglet
Overlap genenone
Upstream geneTdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940, EG633285, Lrat
Downstream geneFgg, Fga, Fgb, Plrg1, EG627094, Dchs2, 1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207J18.bB6Ng01-207J18.g
ACCGA026710GA026711
length749887
definitionB6Ng01-207J18.b B6Ng01-207J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtagagaacca
ccctcggcatatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacagttggaag
cttggtgcctagtgtggctctgttgagatgacaagaactgatgtggggcg
aaggggaagataattatgtcaaggcaggcaccaccctcctgaatggtcaa
ttctgccttgtgggaaaggtcaggttttagggactctcctgagagaatgg
gctgctgatgtgttcagctgtctctgctttcttttccatgcctgctcctt
cagtaagaagtggttccattttctttttctgccatgtattgatatagtca
aggagtcgtcaccaagacacagagactgtgctatttagaatctccggacc
tcagaacaattaacaactgtaatctttcaatgttgtccaccatcagatac
tgtactacagcaataccagacaaagaaacatatacctcagtagtattttc
cagaaaacattgatatttttattttgagacaggatctctctatgtagtcc
aagaactcactatgtagaacaggctgaccttgaacttgcagagatctgtc
tgcctctggctcccaagctgctggaattataggtatactctaccatgtc
gaattcagtaagaatgttgcttattcagtgacattcagaattgcctctag
tattgtaagagacagtgaaagaaatcaggctttactatctactacataga
gttcagggcaagcttagcaatgtaagtttagaattcttattaaagttatg
tatggcagactacattagttattagtaagatgtccccccacactatcact
tagaataaaagccaagtcgctcccatatacaggaatttacaatggtttag
gaagtagatcgggctgtggttttagagtattgcattattcatgagaaggt
tagctagagcagaactccctaattagaaccatgacttgggtgtgaaagcc
cttgccctaggagtgtaaagacctcactcctggattctaagactatagct
gaccttagatagagctcactttgtctcagttgttttattgcccagttcct
gccagtctttgtgtttacattcctctgttttgtgtaagagtcattaagca
ttggtaacctcatttgtaccttgctgatatgtcacctaacttccctattt
tcttctgtataaaaagtttgatgctaaatttgaaaaactacattcagatt
ctacacaatctcatgtgttgcttctgtttgtcatttattcgccgactcct
tgtccacctgcaaccagagacctcttctacacagacagagaccaaaaagg
gtctgcggcatacatggtatatactcacttataagtgggtattagccata
aaatacaggatacccatgcttcaatctacaaacacaaagaagctaaacag
gaagaatgccccaagcaagaatgtttgaatggttgtaagaggtagatgaa
aggaaaggaactggggtggggagagggagtgaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_82775891_82776639
seq2: B6Ng01-207J18.b_48_796 (reverse)

seq1  GGCATGGTAGAGTATACCTCTAATTCCAGCAGCTTGGGAGCCAGAGGCAG  50
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GACATGGTAGAGTATACCTATAATTCCAGCAGCTTGGGAGCCAGAGGCAG  50

seq1  ACAGATCTCTGCAAGTTCAAGGTCAGCCTGTTCTACATAGTGAGTTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTCTGCAAGTTCAAGGTCAGCCTGTTCTACATAGTGAGTTCTTG  100

seq1  GACTACATAGAGAGATCCTGTCTCAAAATAAAAATATCAATGTTTTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACATAGAGAGATCCTGTCTCAAAATAAAAATATCAATGTTTTCTGG  150

seq1  AAAATACTACTGAGGTATATGTTTCTTTGTCTGGTATTGCTGTAGTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTACTGAGGTATATGTTTCTTTGTCTGGTATTGCTGTAGTACAG  200

seq1  TATCTGATGGTGGACAACATTGAAAGATTACAGTTGTTAATTGTTCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATGGTGGACAACATTGAAAGATTACAGTTGTTAATTGTTCTGAG  250

seq1  GTCCGGAGATTCTAAATAGCACAGTCTCTGTGTCTTGGTGACGACTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGGAGATTCTAAATAGCACAGTCTCTGTGTCTTGGTGACGACTCCTT  300

seq1  GACTATATCAATACATGGCAGAAAAAGAAAATGGAACCACTTCTTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATATCAATACATGGCAGAAAAAGAAAATGGAACCACTTCTTACTGA  350

seq1  AGGAGCAGGCATGGAAAAGAAAGCAGAGACAGCTGAACACATCAGCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGGCATGGAAAAGAAAGCAGAGACAGCTGAACACATCAGCAGCC  400

seq1  CATTCTCTCAGGAGAGTCCCTAAAACCTGACCTTTCCCACAAGGCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCAGGAGAGTCCCTAAAACCTGACCTTTCCCACAAGGCAGAAT  450

seq1  TGACCATTCAGGAGGGTGGTGCCTGCCTTGACATAATTATCTTCCCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTCAGGAGGGTGGTGCCTGCCTTGACATAATTATCTTCCCCTTC  500

seq1  GCCCCACATCAGTTCTTGTCATCTCAACAGAGCCACACTAGGCACCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACATCAGTTCTTGTCATCTCAACAGAGCCACACTAGGCACCAAGC  550

seq1  TTCCAACTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTG  600

seq1  ACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGT  650

seq1  GGTTCTCTACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCTACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGA  700

seq1  TGGGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAGAATTC  749
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAGAATTC  749