BAC Information

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BAC

Clone NameB6Ng01-209B15
Chromosome3 (Build37)
Map Location 119,476,100 - 119,477,087
singlet/doubletsinglet
Overlap genePtbp2
Upstream geneDpyd, LOC100043275, LOC100043278
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209B15.bB6Ng01-209B15.g
ACCGA027808GA027809
length995618
definitionB6Ng01-209B15.b B6Ng01-209B15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttattcgatt
ttctgaagtcctgaatgtaactttttgtttgttttttaaataaggtatgt
gtttttaaaagttgggtgttttaagattttgattaaagtcttttttagtg
ccatagcatgtaccttgtgctacaggtttttctaaaaatgtcaagttttc
taacataatatctattgagtgccagctctgtggaacatagacttgtaaac
agtgtgttgagttgtattccattgttgagttacatattaagtagttctca
gttaatgcataatgactatgaaagtgtcttgggctatgtttataattcat
gaacaatttagcagtaagtaaaaagataaatactgattttattttaccat
attcctatttgttgggatagacaaaagatccagtctgtggagggatcccg
tctctttggagactcaagggtttaagtaaatgccatacagctatggtagg
gttacttttcagtgagagtgggtccttggaaatagtaagctgttcttcct
aggagatgggttgagagacatgggaggcaatgacaagtctgtggtgactg
gcagaaatgcagtcatttagcaccaagtttaatactttgaatggtgtttt
tctccccacccaccctctttctgtaagagtactggtcaacagttttttct
ctcagtctagcaaaacaaaatgaatcaaaatataaaggaatattgttggt
ttttaaacatacactttgttaaatgaaccttattttaatagaaaaaaacc
ctacttagtaacctaccgccattccacctcacccgcattacttcacaact
tcttagaagtctttgtgtaccactaccaagttcagttaactggaaattgt
agagaacataatagaccacagtagactatagcaaacagttgcagccatgg
gcaatttctgtatgttctatataatgtgtatcatttctctgcggc

gaattcctgatctttctaagactttcatcatgaatgggtgttggattttg
tcaaattctttctccgagtccaacgagatgatcatgtagtttttgtcttt
gaatttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctatttggtcaggatggatgattgtt
ttaatgtgttcttggattcggatagggataattttattgagtatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatgagagtaattgtggcttcatagaatgagttg
ggtagagtacctctacttctattttgtggaatagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacccatctgg
tcctgggctttttttggttgggagactattaatgactgcttcctatttct
ttaggggatatgggtctgttcagattgttaacttgatccttggtctaact
ttggtacctggtatctgcctagaaatttgtccatttttgtccaggttttc
cagttttgttgagtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119476100_119477087
seq2: B6Ng01-209B15.b_43_1037 (reverse)

seq1  GCTGCAGAGAACTGATACACATT-TATAGAACCTACAG-AACTGCCCATG  48
      || |||||||| ||||||||||| |||||||| ||||| || ||||||||
seq2  GCCGCAGAGAAATGATACACATTATATAGAACATACAGAAATTGCCCATG  50

seq1  GCCTGCAACTGTTTGCTATAGTCTACTGTGGTCTATTATGTTCTCTAC-A  97
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  G-CTGCAACTGTTTGCTATAGTCTACTGTGGTCTATTATGTTCTCTACAA  99

seq1  TTTCCAGTTAACTGA--CTGGTAGTGGTACACAAAGACTTCTTAG-AGTT  144
      |||||||||||||||   |||||||||||||||||||||||| || ||||
seq2  TTTCCAGTTAACTGAACTTGGTAGTGGTACACAAAGACTTCTAAGAAGTT  149

seq1  GTGAAGT-ATGCGGGTGAGGTGGAATGGCGGTAGGTTACTAAGTAGGGTT  193
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTAATGCGGGTGAGGTGGAATGGCGGTAGGTTACTAAGTAGGGTT  199

seq1  TTTTTCTATTAAAATAAGGTTCATTTAAC-AAGTGTATGTTTAAAAACCA  242
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTTCTATTAAAATAAGGTTCATTTAACAAAGTGTATGTTTAAAAACCA  249

seq1  ACAATATTCCTTTATATTTTGATTCATTTTGTTTTGCTAGACTGAGAGAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTCCTTTATATTTTGATTCATTTTGTTTTGCTAGACTGAGAGAA  299

seq1  AAAACTGTTGACCAGTACTCTTACAGAAAGAGGGTGGGTGGGGAGAAAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTTGACCAGTACTCTTACAGAAAGAGGGTGGGTGGGGAGAAAAA  349

seq1  CACCATTCAAAGTATTAAACTTGGTGCTAAATGACTGCATTTCTGCCAGT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCAAAGTATTAAACTTGGTGCTAAATGACTGCATTTCTGCCAGT  399

seq1  CACCACAGACTTGTCATTGCCTCCCATGTCTCTCAACCCATCTCCTAGGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGACTTGTCATTGCCTCCCATGTCTCTCAACCCATCTCCTAGGA  449

seq1  AGAACAGCTTACTATTTCCAAGGACCCACTCTCACTGAAAAGTAACCCTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGCTTACTATTTCCAAGGACCCACTCTCACTGAAAAGTAACCCTA  499

seq1  CCATAGCTGTATGGCATTTACTTAAACCCTTGAGTCTCCAAAGAGACGGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCTGTATGGCATTTACTTAAACCCTTGAGTCTCCAAAGAGACGGG  549

seq1  ATCCCTCCACAGACTGGATCTTTTGTCTATCCCAACAAATAGGAATATGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCACAGACTGGATCTTTTGTCTATCCCAACAAATAGGAATATGG  599

seq1  TAAAATAAAATCAGTATTTATCTTTTTACTTACTGCTAAATTGTTCATGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAATCAGTATTTATCTTTTTACTTACTGCTAAATTGTTCATGA  649

seq1  ATTATAAACATAGCCCAAGACACTTTCATAGTCATTATGCATTAACTGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAACATAGCCCAAGACACTTTCATAGTCATTATGCATTAACTGAG  699

seq1  AACTACTTAATATGTAACTCAACAATGGAATACAACTCAACACACTGTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTAATATGTAACTCAACAATGGAATACAACTCAACACACTGTTT  749

seq1  ACAAGTCTATGTTCCACAGAGCTGGCACTCAATAGATATTATGTTAGAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTATGTTCCACAGAGCTGGCACTCAATAGATATTATGTTAGAAA  799

seq1  ACTTGACATTTTTAGAAAAACCTGTAGCACAAGGTACATGCTATGGCACT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACATTTTTAGAAAAACCTGTAGCACAAGGTACATGCTATGGCACT  849

seq1  AAAAAAGACTTTAATCAAAATCTTAAAACACCCAACTTTTAAAAACACAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACTTTAATCAAAATCTTAAAACACCCAACTTTTAAAAACACAT  899

seq1  ACCTTATTTAAAAAACAAACAAAAAGTTACATTCAGGACTTCAGAAAATC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTAAAAAACAAACAAAAAGTTACATTCAGGACTTCAGAAAATC  949

seq1  GAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  988
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  995


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