BAC Information

Click to search

BAC

Clone NameB6Ng01-209N22
Chromosome3 (Build37)
Map Location 3,311,850 - 3,312,357
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667655
Downstream geneLOC100039140, Hnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209N22.bB6Ng01-209N22.g
ACCGA028371GA028372
length768502
definitionB6Ng01-209N22.b B6Ng01-209N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagaaggagataaagactttgaacaggagagagaaagatagag
agaataggtttcagaaaagcaggtatcccctgtttgggaccttttagtga
aagagaaggataatggaaataagctattacaggaggaaattgggagatgc
cctgcttcctctctggttcctatggagatattctcagtactggttaggat
atctgggtccctttgagatatcaagttctattctctttctgtctcttgtc
tgtccttggtgcacccatttgtccatatgtctgtcagtttatgtttgttt
ttgttttgttgtttgaatgattgttgttctgtgtttcatgttgaaaaaaa
atggttaaaactttacctctttgctgtccatcctttgatttagtttaact
tatttaaaaggcagtctcaatttgcaaagctgaaactgatatgttacact
gcaccatggctgggagtcaagtacagctggaaaagccctgctagaggctc
attatctacacaatcagctcttaaaggggccaatagcttttggcttttaa
cagaatattaccttaaaactggtaactaagggtttgagtcattctaaatt
cttgagtggcatgagccaactcaaacaaaacaggtctttaaagatgcttc
caaattgggataatatattgtgtaattattatttgagaaactagacgtac
taagaatatatatagttttttttattttatttcttttacatttcccaatt
gctattccaaaaagtccc

tgtaggtcagaatagttttctttgcagtcttccttgctcctcctcagagt
tcagataaaacaactcttgagtgtgaactgtgtgtgggaatgagtcccac
atctcatagaataaagtgaaatgctaatattgaaagagacctttgttata
ttttctttttcctttatgcctatcctattggcagttgtgagcatctttca
tttttgttttattaaaagttccaggtgctttctgaagaatttcttaccca
tatgcaggtcccatggtttagacagatctgctcaactgtgaatgagagct
aagagccctgggagatgaaggcagaggaggctgtagcaaagaatctaggt
atgtttgagggactgagcaaggtatggtgtgggtggatgtcaggtgatag
tagaaagaggatatgacatgaaattgcatttgtcagtttctctttaattt
ctctagataatttcactgaggataatattatatgtggtaatgtagatttc
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3311850_3312357
seq2: B6Ng01-209N22.g_67_574 (reverse)

seq1  TGGAAATCTACATTACCACATATAATATTATCCTCAGTGAAATTATCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATCTACATTACCACATATAATATTATCCTCAGTGAAATTATCTAG  50

seq1  AGAAATTAAAGAGAAACTGACAAATGCAATTTCATGTCATATCCTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAAGAGAAACTGACAAATGCAATTTCATGTCATATCCTCTTTC  100

seq1  TACTATCACCTGACATCCACCCACACCATACCTTGCTCAGTCCCTCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCACCTGACATCCACCCACACCATACCTTGCTCAGTCCCTCAAAC  150

seq1  ATACCTAGATTCTTTGCTACAGCCTCCTCTGCCTTCATCTCCCAGGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGATTCTTTGCTACAGCCTCCTCTGCCTTCATCTCCCAGGGCTC  200

seq1  TTAGCTCTCATTCACAGTTGAGCAGATCTGTCTAAACCATGGGACCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTCATTCACAGTTGAGCAGATCTGTCTAAACCATGGGACCTGCA  250

seq1  TATGGGTAAGAAATTCTTCAGAAAGCACCTGGAACTTTTAATAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTAAGAAATTCTTCAGAAAGCACCTGGAACTTTTAATAAAACAAA  300

seq1  AATGAAAGATGCTCACAACTGCCAATAGGATAGGCATAAAGGAAAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGATGCTCACAACTGCCAATAGGATAGGCATAAAGGAAAAAGAA  350

seq1  AATATAACAAAGGTCTCTTTCAATATTAGCATTTCACTTTATTCTATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACAAAGGTCTCTTTCAATATTAGCATTTCACTTTATTCTATGAG  400

seq1  ATGTGGGACTCATTCCCACACACAGTTCACACTCAAGAGTTGTTTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGACTCATTCCCACACACAGTTCACACTCAAGAGTTGTTTTATCT  450

seq1  GAACTCTGAGGAGGAGCAAGGAAGACTGCAAAGAAAACTATTCTGACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGAGGAGGAGCAAGGAAGACTGCAAAGAAAACTATTCTGACCTA  500

seq1  CAGAATTC  508
      ||||||||
seq2  CAGAATTC  508


| Home | SequenceCutter | Blast | Download |