BAC Information

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BAC

Clone NameB6Ng01-209O17
Chromosome3 (Build37)
Map Location 125,294,838 - 125,295,941
singlet/doubletsinglet
Overlap geneNdst4
Upstream geneLOC668817, LOC668820
Downstream geneUgt8a, Arsj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209O17.b
ACCGA028402
length1,103
definitionB6Ng01-209O17.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatctttcgttgtttctaattttgtggaacctttgctgccatg
tgaagcaggttgaatttcaacctaaaaagataagtttatttaaataattt
gtacctacatgtcaacagaattaaatggattgtaatattcacttgggaaa
ttgctgtgtagatcattaaatgagtttcctttagatacttttacatgttt
taaaataaaatcacagctaattacttcacttctgttgttttttttaatca
acatgctgaagtgctgccatatttggaaatacgtatcactgatacagatc
tcgtccacacacgagttcacaaaaatcatcacggttggaagattgcacaa
attttaactttttccactgtcaacgggttctgaattaacttcttatgtct
tgattataaacaaatgactgcagagagcttaggtgtgctctatataatga
tgcaatgagggaaatgttcagaaactatacaggaaatgtaaagacactac
caggctgaaagaaattttcaaactccagagagagatgagcaagagagagg
catgacagagaccagagacagaagggtgtatgtattggagggataacggc
atttaagttttattttcagcactgcataatggtgatgagagaaaatcaaa
cctcaatttttcattcttcctgcagcttaatgagaacacgtttgatcttt
gagatagcaacattagaatttgtcagtgagagttaattatgctattattg
accattctgagaattgaattgctaaacatatccaggatttgatttggaaa
gaggcataaagtatcaccatcaacttttcttaaacagtgttgggcctctg
ccttctgggttttccctgtatatgagcggcccttcagacatctattctga
tacatcaggagactctacgtttagtcctggctcaaatactaagtgaatga
atgctatgggaaggcattggagtgctctatacagacgcagtggggtccag
cctcagtaccaagtaaatgcaacaatataagcctggaaaactatactgca
ttcccccacagcaaacaaaggagaaatgataacccgttagttgcctatcc
ctg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125294838_125295941
seq2: B6Ng01-209O17.b_43_1145 (reverse)

seq1  CAGGGATA-GCAACTAAC-GGTTTTCTTTTCTCTTTGTTTTGCTGTGGGG  48
      |||||||| ||||||||| |||| || |||||| ||  ||||||||||||
seq2  CAGGGATAGGCAACTAACGGGTTATCATTTCTCCTTTGTTTGCTGTGGGG  50

seq1  GAATGC-GTCTAGTTTTTCCAGCTTATATTGTTTGCATTTTCCTGGTACT  97
      |||||| || ||||||| |  |||||||||| |||||||| | |||||||
seq2  GAATGCAGTATAGTTTTCCAGGCTTATATTG-TTGCATTTACTTGGTACT  99

seq1  GAGGCTGGA-CCCACTCCCTGTGTAATAGAGCACTCCAATGCCTTACCAT  146
      ||||||||| |||||| | | ||| |||||||||||||||||||| ||||
seq2  GAGGCTGGACCCCACTGCGTCTGT-ATAGAGCACTCCAATGCCTTCCCAT  148

seq1  AGCATTCTTTCACTTAGTATTTTGAGCCAGGACTAAACTTAGAGTCTCCT  196
      ||||||| ||||||||||| |||||||||||||||||| |||||||||||
seq2  AGCATTCATTCACTTAGTA-TTTGAGCCAGGACTAAACGTAGAGTCTCCT  197

seq1  GATTGTATCAGAATAGATGTTCTGAAGGGCCGTTCATATACAGGGAAAAC  246
      || |||||||||||||||| |||||||||||| |||||||||||||||||
seq2  GA-TGTATCAGAATAGATG-TCTGAAGGGCCGCTCATATACAGGGAAAAC  245

seq1  CCAGAAGGCAGAGGCCCAACACTGTTTAAGAAAAGTTGATGGTGATACTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGCAGAGGCCCAACACTGTTTAAGAAAAGTTGATGGTGATACTT  295

seq1  TATGCCTCTTTCCAAATCAAATCCTGGATATGTTTAGCAATTCAATTCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTCTTTCCAAATCAAATCCTGGATATGTTTAGCAATTCAATTCTC  345

seq1  AGAATGGTCAATAATAGCATAATTAACTCTCACTGACAAATTCTAATGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTCAATAATAGCATAATTAACTCTCACTGACAAATTCTAATGTT  395

seq1  GCTATTTCAATGATCAAACGTGTTCTTATTAAGCTGCAGGAAGAATGAAA  446
      ||||| |||| ||||||||||||||| |||||||||||||||||||||||
seq2  GCTATCTCAAAGATCAAACGTGTTCTCATTAAGCTGCAGGAAGAATGAAA  445

seq1  AATTGAGGTTTGATTTTTTTTCATCACCATTATGCAGTGCTGAAAATAAA  496
      ||||||||||||||||| | ||||||||||||||||||||||||||||||
seq2  AATTGAGGTTTGATTTTCTCTCATCACCATTATGCAGTGCTGAAAATAAA  495

seq1  ACTTAAATGCCGTTATCCCTCCAATACATACACCCTTCTGTCTCTGGTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATGCCGTTATCCCTCCAATACATACACCCTTCTGTCTCTGGTCT  545

seq1  CTGTCATGCCTCTCTCTTGCTCATCTCTCTCTGGAGTTTGAAAATTTCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATGCCTCTCTCTTGCTCATCTCTCTCTGGAGTTTGAAAATTTCTT  595

seq1  TCAGCCTGGTAGTGTCTTTACATTTCCTCTATAGTTTCTGAACATTTCCC  646
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCAGCCTGGTAGTGTCTTTACATTTCCTGTATAGTTTCTGAACATTTCCC  645

seq1  TCATTGCATCATTATATAGAGCACACCTAAGCTCTCTGCAGTCATTTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCATCATTATATAGAGCACACCTAAGCTCTCTGCAGTCATTTGTT  695

seq1  TATAATCAAGACATAAGAAGTTAATTCAGAACACGTTGACAGTGGAAAAA  746
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATAATCAAGACATAAGAAGTTAATTCAGAACCCGTTGACAGTGGAAAAA  745

seq1  GTTAAAATTTGTGCAATCCTACAATTGTGATGATTTTTGTGAACTTGTGT  796
      |||||||||||||||||| | |||  ||||||||||||||||||| ||||
seq2  GTTAAAATTTGTGCAATCTTCCAACCGTGATGATTTTTGTGAACTCGTGT  795

seq1  GTGGACGAGATCTGTATCAGTGATATGTATTTCCAAATATGACAGCACTT  846
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GTGGACGAGATCTGTATCAGTGATACGTATTTCCAAATATGGCAGCACTT  845

seq1  CAGCATGTTGATTAAAAAAAACAACAGAAGTGAAGTAATTAGCTGTGATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTTGATTAAAAAAAACAACAGAAGTGAAGTAATTAGCTGTGATT  895

seq1  TTATTTTAAAACATGTAAAAGTATCTAAAGGAAACTCATTTAATGATCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAAACATGTAAAAGTATCTAAAGGAAACTCATTTAATGATCTA  945

seq1  CACAGCAATTACTCAAGTGAATATTACAATCCATTTAATTCTGTTGATAT  996
      |||||||||| | |||||||||||||||||||||||||||||||||| ||
seq2  CACAGCAATTTCCCAAGTGAATATTACAATCCATTTAATTCTGTTGACAT  995

seq1  GTAGGTACAAATTATTTAAATAAACTTATCTTTTTATGTTGAAATTCAAC  1046
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAGGTACAAATTATTTAAATAAACTTATCTTTTTAGGTTGAAATTCAAC  1045

seq1  CTGCTTCACATGGTAGCAAATGTTCCACAAAATTAGAAACAATGAAAGAT  1096
      ||||||||||||| |||||| ||||||||||||||||||||| |||||||
seq2  CTGCTTCACATGGCAGCAAAGGTTCCACAAAATTAGAAACAACGAAAGAT  1095

seq1  GTGAATTC  1104
      ||||||||
seq2  GTGAATTC  1103