BAC Information

Click to search

BAC

Clone NameB6Ng01-210F18
Chromosome3 (Build37)
Map Location 117,593,327 - 117,594,481
singlet/doubletsinglet
Overlap genenone
Upstream geneFrrs1, Palmd, EG668749, 1700061I17Rik, LOC674908, D3Bwg0562e, 4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210F18.bB6Ng01-210F18.g
ACCGA028717GA028718
length1,0561,146
definitionB6Ng01-210F18.b B6Ng01-210F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgagggatattgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagac
tccacctcataccagacagaatggctaagatcaaacattcaggtgacagc
agatgctggagaggatttagagaaagaggagcactcctccattgctagtg
ggaatacaagctagtacaatcactctggaaatcagtctggcagtttctca
gaaaattggacatagtactaccagaagatccagcaatacctctcctgggc
atatacccagaagatgtaataaggacacatgctccactatgttcatagca
gccttacttataataggcagaatatggaaaggacccagatgtccctcaac
agaggaatgaatacagaaaatgtgatacatttacacaatggagtactact
cagcaattaaaagcaatgaatttatgaaatttttaagcaaatggatggat
ctggaggatattatcctgagtaaggtaacccaatcacaaaacaactcaca
tgatatgcactcactgataagtagattttacccaagaaatttagaatacc
caagatacaatttgtagaacacatgaaactcaagaagaaggaagaccaat
gtgtggatacttcgttccttcttagagtggggaacaaaatacctgtagaa
ggagttacagagacaaagttcggagctgagactgaaggaaggaccgtcca
gagactgccccacctgagcatccatcccatatacaaccaccaaacccaga
cactattgcatatgccagcaagtttttgctgacagaaccctgatatagct
ctctcttgtgaggctatgccagtgcctggcaaatacagaagtggatgctc
acagtcatctatagtatgggaacaacagggctccctaatgaaggagctag
agaaagtacccaaggagctaaaggggtctgcaaacttatagaaggaacaa
catatgaactaaccaataccccaccagagttgtgcctctagttgcaatat
gtaggc
gaattcccttggttatcagtcgtaactctgtattagcccaaaggtagccc
ttactctataaaattttatccttcttctgcattggcctcatttaacacga
cccaccctgtcatagactcagtttgatgtctttttcaaaggatacgtctt
ttggcctggcgctatgggtcagtaggtaaggattcttaagtctatgacta
atccctgggcttctatccctggggcctacagaacagagggagaaaactga
ctcctgcttggtgtactccctctgactgttatagacaggacacctccctc
tgccaccatacacagaacagataagttttatcaaagacaactaagaactt
cagtggactctttaggaaattggggttctcaaagcagtacacctaagatc
tttcccatctcatcaccacatctgacactttttcttactacattgaagcc
tggctactcctcgtattctcagaaatgggtgaagacaaacttactctgcc
agactttcatttcaaccaccattatgttgtttggatatcatgtcagtgaa
aaaaagcctgcagtatcttttgctaacctcaaacctcagattcacaatac
attatttatacaaggtgtatagattgcctctctattacagaacaagattg
atttttgtccaaagtaaaatggtaggctcttctagaaggcgaaaggggga
atatggaacaaaaccaaatggatacaaaagcttatataaaccttagagaa
aatgaatttatttctgaaggtcaaagctaagatttgttgttcatttatca
gagttttcaacaaaggtctagtattaaatcccaacacaaaagtagaattt
ttctttacaagaatatgacagaaatttgtcagttatttttgctttttata
aacactatgatttttactcccacctttcctagaagacaaaaatttttgca
tcctatcaagaatagttttctttgagtcagtttgatagtgatgtttaatt
tgtggtttacctccctgattattctctttgctgttataaaatatcaacaa
aacaattagactaattctgtttcactttggagtcagctgccactgttgtg
tttggcagctaggaacagggaaagatgagcttagtccacctctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117593327_117594481
seq2: B6Ng01-210F18.g_64_1209

seq1  GAATTCCCTTGGTTATCAGTCGTAACTCTGTATTAGCCCAAAGGTAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGGTTATCAGTCGTAACTCTGTATTAGCCCAAAGGTAGCCC  50

seq1  TTACTCTATAAAATTTTATCCTTCTTCTGCATTGGCCTCATTTAACACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTATAAAATTTTATCCTTCTTCTGCATTGGCCTCATTTAACACGA  100

seq1  CCCACCCTGTCATAGACTCAGTTTGATGTCTTTTTCAAAGGATACGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCTGTCATAGACTCAGTTTGATGTCTTTTTCAAAGGATACGTCTT  150

seq1  TTGGCCTGGCGCTATGGGTCAGTAGGTAAGGATTCTTAAGTCTATGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTGGCGCTATGGGTCAGTAGGTAAGGATTCTTAAGTCTATGACTA  200

seq1  ATCCCTGGGCTTCTATCCCTGGGGCCTACAGAACAGAGGGAGAAAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGGGCTTCTATCCCTGGGGCCTACAGAACAGAGGGAGAAAACTGA  250

seq1  CTCCTGCTTGGTGTACTCCCTCTGACTGTTATAGACAGGACACCTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCTTGGTGTACTCCCTCTGACTGTTATAGACAGGACACCTCCCTC  300

seq1  TGCCACCATACACAGAACAGATAAGTTTTATCAAAGACAACTAAGAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCATACACAGAACAGATAAGTTTTATCAAAGACAACTAAGAACTT  350

seq1  CAGTGGACTCTTTAGGAAATTGGGGTTCTCAAAGCAGTACACCTAAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGACTCTTTAGGAAATTGGGGTTCTCAAAGCAGTACACCTAAGATC  400

seq1  TTTCCCATCTCATCACCACATCTGACACTTTTTCTTACTACATTGAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATCTCATCACCACATCTGACACTTTTTCTTACTACATTGAAGCC  450

seq1  TGGCTACTCCTCGTATTCTCAGAAATGGGTGAAGACAAACTTACTCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTCCTCGTATTCTCAGAAATGGGTGAAGACAAACTTACTCTGCC  500

seq1  AGACTTTCATTTCAACCACCATTATGTTGTTTGGATATCATGTCAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCATTTCAACCACCATTATGTTGTTTGGATATCATGTCAGTGAA  550

seq1  AAAAAGCCTGCAGTATCTTTTGCTAACCTCAAACCTCAGATTCACAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCTGCAGTATCTTTTGCTAACCTCAAACCTCAGATTCACAATAC  600

seq1  ATTATTTATACAAGGTGTATAGATTGCCTCTCTATTACAGAACAAGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATACAAGGTGTATAGATTGCCTCTCTATTACAGAACAAGATTG  650

seq1  ATTTTTGTCCAAAGTAAAATGGTAGGCTCTTCTAGAAGGCGAAAGGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCCAAAGTAAAATGGTAGGCTCTTCTAGAAGGCGAAAGGGGGA  700

seq1  ATATGGAACAAAACCAAATGGATACAAAAGCTTATATAAACCTTAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAACAAAACCAAATGGATACAAAAGCTTATATAAACCTTAGAGAA  750

seq1  AATGAATTTATTTCTGAAGGTCAAAGCTAAGATTTGTTGTTCATTTATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTTATTTCTGAAGGTCAAAGCTAAGATTTGTTGTTCATTTATCA  800

seq1  GAGTTTTCAACAAAGGTCTAGTATTAAATCCCAACACAAAAGTAGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCAACAAAGGTCTAGTATTAAATCCCAACACAAAAGTAGAATTT  850

seq1  TTCTTTACAAGAATATGACAGAAATTTGTCAGTTATTTTTGCTTTTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCTTTACAAGAATATGACAGAAATTTGTCAGTTATTTTTGCTTTTTAT-  899

seq1  AAACACTATGATTTTTACTCCCACC-TTCCTAGAAGACAAAAA-TTTTGC  948
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  AAACACTATGATTTTTACTCCCACCTTTCCTAGAAGACAAAAATTTTTGC  949

seq1  ATCCTATC-AGAATAGTTTTCTTTGAGTCAGTTTGATAGTGATGTTTAAT  997
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATCAAGAATAGTTTTCTTTGAGTCAGTTTGATAGTGATGTTTAAT  999

seq1  TTGTGGTTTACCTCCCTGGTTATTCTCTTTGCTGTTATAAAATATCCAAC  1047
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  TTGTGGTTTACCTCCCTGATTATTCTCTTTGCTGTTATAAAATAT-CAAC  1048

seq1  AAAAACAAATTAAGGAACTTATTCTGTTTCACTTTTGGAGTCAGCTG-CA  1096
      ||||   |||||    ||| |||||||||||| |||||||||||||| ||
seq2  AAAA--CAATTA---GACTAATTCTGTTTCAC-TTTGGAGTCAGCTGCCA  1092

seq1  GTGTTGTGTTT-GCAGCTAGGAAACAGGGAAAGATGGGGGCTTAGTTCAC  1145
       |||||||||| ||||||||| |||||||||||||  | ||||||| |||
seq2  CTGTTGTGTTTGGCAGCTAGG-AACAGGGAAAGAT--GAGCTTAGTCCAC  1139

seq1  TCTCTCTCCT  1155
         |||||||
seq2  ---CTCTCCT  1146