BAC Information

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BAC

Clone NameB6Ng01-210L08
Chromosome3 (Build37)
Map Location 123,075,938 - 123,224,201
singlet/doubletdoublet
Overlap geneG430022H21Rik, Prss12, EG668804
Upstream geneLOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d
Downstream geneNdst3, LOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210L08.bB6Ng01-210L08.g
ACCGA028977GA028978
length7111,153
definitionB6Ng01-210L08.b B6Ng01-210L08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,075,938 - 123,076,647)(123,223,034 - 123,224,201)
sequence
gaattccagggcgggaaggtgggtgggtgggggagcaccctcacagaggc
aggggttggggatatgggacggggggctctggaggggagacctggaaagg
ggataacatttgaaatgtaaataaagaaaatatccaataaaagaaataaa
ataaactagaataaaagttttatagaggggaaccaacaatttcagagcag
acacaaaagaaatataggcataatacagatgttaaataagaaatgttaaa
taagaaatataagcataatacagatgttaaataagaaatgttaaataaga
aatataagcataatacagatgttaaataagaaatgttaaataagaaatat
aagcataatacagatgttaaataagaaatataagcataatacagatgtta
aataagaaatgttaaataagaaatataagcataatacagatgttaaataa
gaaatgttaaataagaaatataagcataatacagatgttaaataagaaat
gttaaataagaaatataagcataatacagatgttaaataagaaatataag
cataatacagatgttaaataagaaatataagcataatacagatgttaaat
aagaaatataagcttaatacagatgttaaataagaaatataagcataata
cagatgttaaataagaaatataagcataatacagatgttaaataagaaaa
tataagcataa
gaattcctctgatgtccataggaaccagcactcacatgtatacacacaga
gatatacactcatacatatccatgcggatccatcaaagccctaagtgaat
gtgaattattgacaaggaccagtgaatgccagagacctttggagatttgc
aaagtcttcctccaggtgccaagccttcttctggtccagatacaagtgtt
tatgactgattgtccagtgtgtgataaaaactggcaaatgtagcttcctc
taccccaatgactagaaccggaggcttctcccctacaaagacctagcaag
actagctaacccctccccaggttacataagaggcctggttctgtgtcagt
gcataggtgatgctgttccaccagagagctcagcatgtgtgtctgtgtgt
ctgtcttttctttattccctcattagctcagtcaggtgtcaaggaccaag
gcatgtaagatgtggcagatacacatataattaataaataagccactatt
ttcaaaaataactggcttgacaaacagcaactgcgccagctggccccagt
taatgacaactctgcaaaggaccaaggatgcccagggactccatgatctt
tcatctccaatcattattttttcccataggacccctggatgcagccaaga
gtggggaacacacccctaagctttcaggttgacaccgaaagctacaaagt
cagttttaatgatgatgatgaaaggattttatgtgcctgttacaggagat
caggaaagccccaagggctggcttccaacagccactgggcaatatccacc
tgattcagcttatgttcgtcaatgaatgttccgtggctagggagagattg
gctatgaactattttaccatgcaggtaaagcgccacctgtacagaccctt
tatctgcagctgtgaaccctgaaaccactgaattgtcaattcacatgcat
gaaccagggcactccagaagagctaaacactgtgctctcaaaagccattt
taaaacatgatacgcaacttcccctaagcaagcagggcttttggaggcac
cttaagcaatccaaacatgttccacacactttctaaaaagcatttggatt
cagcatgctgtctctagaatgttcctattctgcagttttttccttagtct
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_123075938_123076647
seq2: B6Ng01-210L08.b_43_753

seq1  GAATTCCAGGGCGGGAAGGTGGGTGGGTGGGGGAGCACCCTCACAGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCGGGAAGGTGGGTGGGTGGGGGAGCACCCTCACAGAGGC  50

seq1  AGGGGTTGGGGATATGGGACGGGGGGCTCTGGAGGGGAGACCTGGAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTGGGGATATGGGACGGGGGGCTCTGGAGGGGAGACCTGGAAAGG  100

seq1  GGATAACATTTGAAATGTAAATAAAGAAAATATCCAATAAAAGAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACATTTGAAATGTAAATAAAGAAAATATCCAATAAAAGAAATAAA  150

seq1  ATAAACTAGAATAAAAGTTTTATAGAGGGGAACCAACAATTTCAGAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTAGAATAAAAGTTTTATAGAGGGGAACCAACAATTTCAGAGCAG  200

seq1  ACACAAAAGAAATATAGGCATAATACAGATGTTAAATAAGAAATGTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAGAAATATAGGCATAATACAGATGTTAAATAAGAAATGTTAAA  250

seq1  TAAGAAATATAAGCATAATACAGATGTTAAATAAGAAATGTTAAATAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATATAAGCATAATACAGATGTTAAATAAGAAATGTTAAATAAGA  300

seq1  AATATAAGCATAATACAGATGTTAAATAAGAAATGTTAAATAAGAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGCATAATACAGATGTTAAATAAGAAATGTTAAATAAGAAATAT  350

seq1  AAGCATAATACAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAATACAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTA  400

seq1  AATAAGAAATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAA  450

seq1  GAAATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAGAAAT  500

seq1  GTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAGAAATATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAGAAATATAAG  550

seq1  CATAATACAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAAT  600

seq1  AAGAAATATAAGCATAATACAGATGTTAAATAAGAAATATAAGCATAATA  650
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATAAGCTTAATACAGATGTTAAATAAGAAATATAAGCATAATA  650

seq1  CAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAG-AAA  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGATGTTAAATAAGAAATATAAGCATAATACAGATGTTAAATAAGAAAA  700

seq1  TATAAGCATAA  710
      |||||||||||
seq2  TATAAGCATAA  711

seq1: chr3_123223034_123224201
seq2: B6Ng01-210L08.g_64_1216 (reverse)

seq1  AATAGACTTAAAGAAAAAAAAACTGGCAGAATAGGAACATTTTTAAGGAG  50
      ||||||||  |||   |||||||| |||||||||||||||| |    |||
seq2  AATAGACT--AAG--GAAAAAACT-GCAGAATAGGAACATTCT---AGAG  42

seq1  ACAGGCATGGCTGAATCAAATTGCTTTTTAG-AAGTGTGTGGAACATGGT  99
      ||| |||| |||||||| || |||||||||| ||||||||||||||| ||
seq2  ACA-GCAT-GCTGAATCCAAATGCTTTTTAGAAAGTGTGTGGAACAT-GT  89

seq1  TTGGATTTGCTTAA-GTGCCTCCAAAAGCCCTGCTTTGCTTAGGGGAAAG  148
      ||||| |||||||| ||||||||||||||||||| ||||||||||| |||
seq2  TTGGA-TTGCTTAAGGTGCCTCCAAAAGCCCTGC-TTGCTTAGGGG-AAG  136

seq1  TTGGCGTATCTTGTTTT-AAATGGCTTTTGAGAGCACAGTGTTTTAGCTC  197
      || ||||||| |||||| ||||||||||||||||||||||| ||||||||
seq2  TT-GCGTATCATGTTTTAAAATGGCTTTTGAGAGCACAGTG-TTTAGCTC  184

seq1  TTCCTGGAGTGCCCTGGTTCATGCATGTGAATTGACAATTCAGTGGTTTC  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-CTGGAGTGCCCTGGTTCATGCATGTGAATTGACAATTCAGTGGTTTC  233

seq1  AGGGTTCACAGCTGCAGATAAAGGGTCTGTACAGGTGGCGCTTTTACCTG  297
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGGTTCACAGCTGCAGATAAAGGGTCTGTACAGGTGGCGC-TTTACCTG  282

seq1  CATGGTAAAATAGTTCATAGCCAATCTCTCCCTAGCCACGGAACATTCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAAAATAGTTCATAGCCAATCTCTCCCTAGCCACGGAACATTCAT  332

seq1  TGACGAACATAAGCTGAATCAGGTGGATATTGCCCAGTGGCTGTTGGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGAACATAAGCTGAATCAGGTGGATATTGCCCAGTGGCTGTTGGAAG  382

seq1  CCAGCCCTTGGGGCTTTCCTGATCTCCTGTAACAGGCACATAAAATCCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTTGGGGCTTTCCTGATCTCCTGTAACAGGCACATAAAATCCTT  432

seq1  TCATCATCATCATTAAAACTGACTTTGTAGCTTTCGGTGTCAACCTGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCATCATTAAAACTGACTTTGTAGCTTTCGGTGTCAACCTGAAA  482

seq1  GCTTAGGGGTGTGTTCCCCACTCTTGGCTGCATCCAGGGGTCCTATGGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGGGTGTGTTCCCCACTCTTGGCTGCATCCAGGGGTCCTATGGGA  532

seq1  AAAAATAATGATTGGAGATGAAAGATCATGGAGTCCCTGGGCATCCTTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGATTGGAGATGAAAGATCATGGAGTCCCTGGGCATCCTTGG  582

seq1  TCCTTTGCAGAGTTGTCATTAACTGGGGCCAGCTGGCGCAGTTGCTGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCAGAGTTGTCATTAACTGGGGCCAGCTGGCGCAGTTGCTGTTT  632

seq1  GTCAAGCCAGTTATTTTTGAAAATAGTGGCTTATTTATTAATTATATGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCCAGTTATTTTTGAAAATAGTGGCTTATTTATTAATTATATGTG  682

seq1  TATCTGCCACATCTTACATGCCTTGGTCCTTGACACCTGACTGAGCTAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCACATCTTACATGCCTTGGTCCTTGACACCTGACTGAGCTAAT  732

seq1  GAGGGAATAAAGAAAAGACAGACACACAGACACACATGCTGAGCTCTCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAATAAAGAAAAGACAGACACACAGACACACATGCTGAGCTCTCTG  782

seq1  GTGGAACAGCATCACCTATGCACTGACACAGAACCAGGCCTCTTATGTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAGCATCACCTATGCACTGACACAGAACCAGGCCTCTTATGTAA  832

seq1  CCTGGGGAGGGGTTAGCTAGTCTTGCTAGGTCTTTGTAGGGGAGAAGCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGAGGGGTTAGCTAGTCTTGCTAGGTCTTTGTAGGGGAGAAGCCT  882

seq1  CCGGTTCTAGTCATTGGGGTAGAGGAAGCTACATTTGCCAGTTTTTATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTTCTAGTCATTGGGGTAGAGGAAGCTACATTTGCCAGTTTTTATCA  932

seq1  CACACTGGACAATCAGTCATAAACACTTGTATCTGGACCAGAAGAAGGCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGGACAATCAGTCATAAACACTTGTATCTGGACCAGAAGAAGGCT  982

seq1  TGGCACCTGGAGGAAGACTTTGCAAATCTCCAAAGGTCTCTGGCATTCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTGGAGGAAGACTTTGCAAATCTCCAAAGGTCTCTGGCATTCAC  1032

seq1  TGGTCCTTGTCAATAATTCACATTCACTTAGGGCTTTGATGGATCCGCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTGTCAATAATTCACATTCACTTAGGGCTTTGATGGATCCGCAT  1082

seq1  GGATATGTATGAGTGTATATCTCTGTGTGTATACATGTGAGTGCTGGTTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGTATGAGTGTATATCTCTGTGTGTATACATGTGAGTGCTGGTTC  1132

seq1  CTATGGACATCAGAGGAATTC  1168
      |||||||||||||||||||||
seq2  CTATGGACATCAGAGGAATTC  1153