BAC Information

Click to search

BAC

Clone NameB6Ng01-210O07
Chromosome3 (Build37)
Map Location 29,539,038 - 29,540,009
singlet/doubletsinglet
Overlap gene6130401L20Rik
Upstream geneTnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527
Downstream geneLOC100040676, Evi1, Mds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210O07.bB6Ng01-210O07.g
ACCGA029111GA029112
length184976
definitionB6Ng01-210O07.b B6Ng01-210O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaacatttaagtaagaaagaaaaccaatcaaagaaaacacatggtggaaa
ttgtggctctagctgcatatgtagcacaggatggcctggtaggtcatcaa
tgggaggagaggcctttggtcctgtgaaggctctatgccccagtataggg
aaatgccaggaccaggaatgggagtgggtgggtt
gaattcctgagtgtgcaaagagtgagtttccattcatgtgccttctttgg
ggctcttttccatctgttggtttgtattgttcaacttcaatgtgatattt
tttgttttaccttactataataacttaattttgttataatttttaaaata
aatggatggaatgaattcatacacggatagatgagtggatgaaaggatga
aaactactacgtgggtaaaggttaacaatggactgtcatttatacatact
gggaaagggaaaattaattatttccaatagagtggcactggtaaccaact
gctcctcggcatggcttaggttaaggagaagttgaccaatatataaagaa
tcccacaaggttttttgtttgtttgtttgtttgtttgtgcattcatttgg
ttacagtttcagaaacctaaagttgggtgggtagggtttgggcagaggat
ctaaagaacttaggagaggggaatatatgatctaaatatatttaaatgta
aatatttttaaataatgaaaatattatttaaaaagaaaacaattttaaaa
ggagatgtagtgaactgatttcctgggcaatattatttcaacccagccta
atcatgtctatgttatgtggctactagtagtcactctaatgcaggtctac
agtgagcatgaataagtagggtaaaaataaacacagaatgtacagttgaa
gaacaaaagagccagcaggaaatttaatgtgggagctaagacttgtccca
aaagagataaggaggttaaggagaggcttgatctgaaatgaggggtaccc
acagagcaggaccccactcagctaacctttccaccctgtaaaaagaaaag
atctgaggaatttttggtttctagcaatgacaagaaaggaaatctactga
aaatttaagaaggccaggggtttgccttcgaggctgctttcagactgggc
agtgtcattctatgtggttctggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29539038_29540009
seq2: B6Ng01-210O07.g_67_1042 (reverse)

seq1  AAGCCAGAACCACATAG-ATGACACTGCCAAGTCTGGAAGCAGCCTCG-A  48
      ||||||||||||||||| ||||||||||| |||||| ||||||||||| |
seq2  AAGCCAGAACCACATAGAATGACACTGCCCAGTCTGAAAGCAGCCTCGAA  50

seq1  GGCAAA-CCCTGGCCTTCTTAAATTTTCAGTAGATTTCCTTTCTTGTCAT  97
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACCCCTGGCCTTCTTAAATTTTCAGTAGATTTCCTTTCTTGTCAT  100

seq1  TGCTAGAAACCAAAAATTCCTCAGATCTTTTCTTTTTACAGGGTGG-AAG  146
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCTAGAAACCAAAAATTCCTCAGATCTTTTCTTTTTACAGGGTGGAAAG  150

seq1  GTTAGCTGAGTGGGGTCCTGCTCTGTGGGTACCCCTCATTTCAGATCAAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTGAGTGGGGTCCTGCTCTGTGGGTACCCCTCATTTCAGATCAAG  200

seq1  CCTCTCCTTAACCTCCTTATCTCTTTTGGGACAAGTCTTAGCTCCCACAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTTAACCTCCTTATCTCTTTTGGGACAAGTCTTAGCTCCCACAT  250

seq1  TAAATTTCCTGCTGGCTCTTTTGTTCTTCAACTGTACATTCTGTGTTTAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCTGCTGGCTCTTTTGTTCTTCAACTGTACATTCTGTGTTTAT  300

seq1  TTTTACCCTACTTATTCATGCTCACTGTAGACCTGCATTAGAGTGACTAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCTACTTATTCATGCTCACTGTAGACCTGCATTAGAGTGACTAC  350

seq1  TAGTAGCCACATAACATAGACATGATTAGGCTGGGTTGAAATAATATTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCCACATAACATAGACATGATTAGGCTGGGTTGAAATAATATTGC  400

seq1  CCAGGAAATCAGTTCACTACATCTCCTTTTAAAATTGTTTTCTTTTTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAATCAGTTCACTACATCTCCTTTTAAAATTGTTTTCTTTTTAAA  450

seq1  TAATATTTTCATTATTTAAAAATATTTACATTTAAATATATTTAGATCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCATTATTTAAAAATATTTACATTTAAATATATTTAGATCAT  500

seq1  ATATTCCCCTCTCCTAAGTTCTTTAGATCCTCTGCCCAAACCCTACCCAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCCTCTCCTAAGTTCTTTAGATCCTCTGCCCAAACCCTACCCAC  550

seq1  CCAACTTTAGGTTTCTGAAACTGTAACCAAATGAATGCACAAACAAACAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTAGGTTTCTGAAACTGTAACCAAATGAATGCACAAACAAACAA  600

seq1  ACAAACAAACAAAAAACCTTGTGGGATTCTTTATATATTGGTCAACTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAAAAACCTTGTGGGATTCTTTATATATTGGTCAACTTCT  650

seq1  CCTTAACCTAAGCCATGCCGAGGAGCAGTTGGTTACCAGTGCCACTCTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACCTAAGCCATGCCGAGGAGCAGTTGGTTACCAGTGCCACTCTAT  700

seq1  TGGAAATAATTAATTTTCCCTTTCCCAGTATGTATAAATGACAGTCCATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATAATTAATTTTCCCTTTCCCAGTATGTATAAATGACAGTCCATT  750

seq1  GTTAACCTTTACCCACGTAGTAGTTTTCATCCTTTCATCCACTCATCTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCTTTACCCACGTAGTAGTTTTCATCCTTTCATCCACTCATCTAT  800

seq1  CCGTGTATGAATTCATTCCATCCATTTATTTTAAAAATTATAACAAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTATGAATTCATTCCATCCATTTATTTTAAAAATTATAACAAAATT  850

seq1  AAGTTATTATAGTAAGGTAAAACAAAAAATATCACATTGAAGTTGAACAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTATAGTAAGGTAAAACAAAAAATATCACATTGAAGTTGAACAA  900

seq1  TACAAACCAACAGATGGAAAAGAGCCCCAAAGAAGGCACATGAATGGAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAACAGATGGAAAAGAGCCCCAAAGAAGGCACATGAATGGAAA  950

seq1  CTCACTCTTTGCACACTCAGGAATTC  972
      ||||||||||||||||||||||||||
seq2  CTCACTCTTTGCACACTCAGGAATTC  976