BAC Information

Click to search

BAC

Clone NameB6Ng01-211B19
Chromosome3 (Build37)
Map Location 97,037,638 - 97,038,173
singlet/doubletsinglet
Overlap genenone
Upstream geneHist2h3c2, Hist2h2aa1, Hist2h3c1, LOC100043378, Hist2h4, Hist2h3b, Hist2h2bb, Fcgr1, Pafah1b1-ps1, Terc, BC107364, LOC668500, Hfe2, Txnip, Polr3gl, Ankrd34, 6330549D23Rik, Rbm8a, Pex11b, Itga10, Ankrd35, Pias3, Polr3c, Zfp364, Cd160, Pdzk1, Gpr89, Gja8, 9230114J08Rik, Gja5, Acp6, Bcl9
Downstream geneOlfr1402, Chd1l, Fmo5, Prkab2, Pde4dip, Sec22b, EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211B19.bB6Ng01-211B19.g
ACCGA029277GA029278
length1,226531
definitionB6Ng01-211B19.b B6Ng01-211B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaggtaaatgaatgaacctagtaaaagtcatcctgactgagat
aactcagaccccaaaagacaaataagggaagcttttcctttatatggggt
gtcagcttgtaagcctgtgataggcatgcttcaaccctcagaaccacaga
gaacaggcatagagaaagggactaggtgaacgagaagaaatgcctgagga
ggaggaatggaatatagagttacagatgggacagagaagacaaagcccag
actagaacatctcccaccaccaaataaaacctccagtgccagggtggatc
acatctaactccgttgttggtcaaatgggctccatagaaactcccaaaca
aaccaggttatcgccaagactattggtggttctctacaaactggtggtaa
ggccgtatcactgaagacaacatcgacatagttcattgagcacagagaag
ttgagctggcacctccctagagcttttgtccccactgactggtgttcatc
atcctggaaggtagcctgcacactaccagagaagggcacacaccaaccct
gctacaaacgcctcagtctacaatagtgacctgctttcttggtgtgctga
tgttatagaggcacaatagtcatgggtgtaaccaagcactatctgatcag
atttaaggcccgtgagatgaatcgcatgcccaacactgtgcaagtgacca
ggaacctgaaactacacaggcgtgagcctagcacaaagccaaacaggtct
attctgttacaggaacatagctaaataaaatatctcctaacaacatgatt
tctctctcagccatcatcagagaagctctctcctgcagtagacgggaaca
agtacagagactcatgactagacaataggcagagtgagagaccttagaac
actcattcctacatggggttgtctccaccaaatactttcccccaaggctc
agggaactctgaaggaaggaaaggtgggaaagggtatagggagccagagg
ggcctgggaagaaaccaaagggagcaaaggccttctagacatagcaggag
caaagcacacatgaactcacagagattggtggacacatgcacagggcata
acagaggatggaggaggcccagggtggagggttccagggcgctggagagg
gggcacggtggacctaggctctggtccataagcgtaaatgaatttccaat
gtggatagggcacattagagctctag
ctcctttaatccatttcttgcttttctgttttccaagtggggattgttgg
acagacaatcctggttccagtctctccctttgtcagtcactttcctaaca
gaacctcctaaagatggtcacatatcctccattttatgcagtgcccattc
ctctagccaggactcaccattgaggctaccttggttctttgatgcccacc
tactctgagaacctaacaatatcgcatagtagcaataatactggctttgg
agtcacgtggacctgagtttggatattgaactatatttttagccaggaaa
ctccaggcaatggtggcacactccttaaatcccagcgctcaggatgcaga
ggcaggtgagctctgtgagttcaaggccagcctggtctacagttccaggg
cagccagagctacacagagaaaccatcttgaaaaaacaaaacaaaacaac
aacaacccaaggaaagaaagaacttcaggcaacaccttcccgttttcttt
ctcactcagttcaattctttacatcacaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_97037638_97038173
seq2: B6Ng01-211B19.g_62_597

seq1  GAATTCCTCCTTTAATCCATTTCTTGCTTTTCTGTTTTCCAAGTGGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTTAATCCATTTCTTGCTTTTCTGTTTTCCAAGTGGGGAT  50

seq1  TGTTGGACAGACAATCCTGGTTCCAGTCTCTCCCTTTGTCAGTCACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGACAGACAATCCTGGTTCCAGTCTCTCCCTTTGTCAGTCACTTTC  100

seq1  CTAACAGAACCTCCTAAAGATGGTCACATATCCTCCATTTTATGCAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGAACCTCCTAAAGATGGTCACATATCCTCCATTTTATGCAGTGC  150

seq1  CCATTCCTCTAGCCAGGACTCACCATTGAGGCTACCTTGGTTCTTTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTCTAGCCAGGACTCACCATTGAGGCTACCTTGGTTCTTTGATG  200

seq1  CCCACCTACTCTGAGAACCTAACAATATCGCATAGTAGCAATAATACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTACTCTGAGAACCTAACAATATCGCATAGTAGCAATAATACTGG  250

seq1  CTTTGGAGTCACGTGGACCTGAGTTTGGATATTGAACTATATTTTTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGTCACGTGGACCTGAGTTTGGATATTGAACTATATTTTTAGCC  300

seq1  AGGAAACTCCAGGCAATGGTGGCACACTCCTTAAATCCCAGCGCTCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTCCAGGCAATGGTGGCACACTCCTTAAATCCCAGCGCTCAGGA  350

seq1  TGCAGAGGCAGGTGAGCTCTGTGAGTTCAAGGCCAGCCTGGTCTACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGCAGGTGAGCTCTGTGAGTTCAAGGCCAGCCTGGTCTACAGTT  400

seq1  CCAGGGCAGCCAGAGCTACACAGAGAAACCATCTTGAAAAAACAAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAGCCAGAGCTACACAGAGAAACCATCTTGAAAAAACAAAACAA  450

seq1  AACAACAACAACCCAAGGAAAGAAAGAACTTCAGGCAACACCTTCCCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACCCAAGGAAAGAAAGAACTTCAGGCAACACCTTCCCGTT  500

seq1  TTCTTTCTCACTCAGTTCAGTTCTTTACATCACAAC  536
      ||||||||||||||||||| ||||||||||||||||
seq2  TTCTTTCTCACTCAGTTCAATTCTTTACATCACAAC  536