BAC Information

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BAC

Clone NameB6Ng01-211G03
Chromosome3 (Build37)
Map Location 31,670,674 - 31,798,866
singlet/doubletdoublet
Overlap genenone
Upstream geneTloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil, Cldn11, Slc7a14, LOC625125
Downstream geneKcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211G03.bB6Ng01-211G03.g
ACCGA029463GA029464
length1,088134
definitionB6Ng01-211G03.b B6Ng01-211G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,670,674 - 31,671,755)(31,798,733 - 31,798,866)
sequence
gaattccagaccagagagagttactttctcaaaaacagacagcatctgta
gaaagagatctaaggttaatctttggcctacccttccttcacacacacac
acacacacacacacacacacacacacacacacatatgcacgcacacacac
acatacacacgcacgcacatgcatgcatacacatgcatgcacacacatat
gcgcatagattcatattccttagctctgccacatgcagagttaatcagat
cccataatagtgactcccagcagtctatgatttaacatgttgcccaggta
attgggttttttgggtttttttttttttttttttttttgctaaacattga
gatacactgttaagttatcgataagaggccacatcacactttcactggag
ttgatttaagaatgaacagcacaagccaggagtggtggcacacgccttta
atcccagcactcaggaggcagaggcaggcggatttctgagttcaaggcca
gtctggtctacaaagtgagttccaggacagccagggctacacagagaaac
cctgtctcaaaaaacaaacaaacaaacaaaaaaaaaacaaaaacaacaac
aacaaaaagaatgaacagcacagagtttttgctaaggaactcaattctct
gtccacagactcaacatcgtgggcacacccatgcactgcctctgttgaca
gcatttttatcaattacctaccatggcccaatttgttccatctgatttga
tcttcacctcaaccatgcatggctaatgttcttggaattagtgaaatagg
ggccccagtgacacaagattaccttgtaaatgatatgtctagtgtggtgg
gccaattttaattgtcagcttgacacaatgtagaatcaccagaaaaaatg
actcttcagtaagagtttgtctaaataagccagcttgtggggcatgcctg
aagatggatttttctaacgggttagttgaggtagaaagaccccccctcag
ccccggaatgtgggtacaattttctgggatgggccctaggctaatatgaa
aaaggaaaagggtaactggcaagcttgcatgactctgt
tctacctgtgatgtcagggtcagattctgttatttgtttttgtttgtttg
tttgtttgtttgtttgtggtgagaaaggaggatcatgattgagagaagaa
ggaaggaaaggaaaggggaggaaaaggaagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_31670674_31671755
seq2: B6Ng01-211G03.b_47_1134

seq1  GAATTCCAGACCAGAGAGAGTTACTTTCTCAAAAACAGACAGCATCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACCAGAGAGAGTTACTTTCTCAAAAACAGACAGCATCTGTA  50

seq1  GAAAGAGATCTAAGGTTAATCTTTGGCCTACCCTTCCTTCACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGATCTAAGGTTAATCTTTGGCCTACCCTTCCTTCACACACACAC  100

seq1  ACACACACACACACACACACACACACACACACATATGCACGCACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACATATGCACGCACACACAC  150

seq1  ACATACACACGCACGCACATGCATGCATACACATGCATGCACACACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACGCACGCACATGCATGCATACACATGCATGCACACACATAT  200

seq1  GCGCATAGATTCATATTCCTTAGCTCTGCCACATGCAGAGTTAATCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCATAGATTCATATTCCTTAGCTCTGCCACATGCAGAGTTAATCAGAT  250

seq1  CCCATAATAGTGACTCCCAGCAGTCTATGATTTAACATGTTGCCCAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAATAGTGACTCCCAGCAGTCTATGATTTAACATGTTGCCCAGGTA  300

seq1  ATTGGGTTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTGCTAAACATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTGCTAAACATTGA  350

seq1  GATACACTGTTAAGTTATCGATAAGAGGCCACATCACACTTTCACTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACTGTTAAGTTATCGATAAGAGGCCACATCACACTTTCACTGGAG  400

seq1  TTGATTTAAGAATGAACAGCACAAGCCAGGAGTGGTGGCACACGCCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTAAGAATGAACAGCACAAGCCAGGAGTGGTGGCACACGCCTTTA  450

seq1  ATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCA  500

seq1  GTCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAC  550

seq1  CCTGTCTCAAAAAACAAACAAACAAACAAAAAAAAAACAAAAACAACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCAAAAAACAAACAAACAAACAAAAAAAAAACAAAAACAACAAC  600

seq1  AACAAAAAGAATGAACAGCACAGAGTTTTTGCTAAGGAACTCAATTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGAATGAACAGCACAGAGTTTTTGCTAAGGAACTCAATTCTCT  650

seq1  GTCCACAGACTCAACATCGTGGGCACACCCATGCACTGCCTCTGTTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGACTCAACATCGTGGGCACACCCATGCACTGCCTCTGTTGACA  700

seq1  GCATTTTTATCAATTACCTACCATGGCCCAATTTGTTCCATCTGATTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTATCAATTACCTACCATGGCCCAATTTGTTCCATCTGATTTGA  750

seq1  TCTTCACCTCAACCATGCATGGCTAATGTTCTTGGAATTAGTGAAATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCTCAACCATGCATGGCTAATGTTCTTGGAATTAGTGAAATAGG  800

seq1  GGCCCCAGTGACACAAGATTACCTTGTAAATGATATGTCTAGTGTGGT-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCCCCAGTGACACAAGATTACCTTGTAAATGATATGTCTAGTGTGGTGG  850

seq1  GCCAATTTTAATTGTCAGCTTGACACAATGTAGAATCACCAGAAAAAATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTTTAATTGTCAGCTTGACACAATGTAGAATCACCAGAAAAAATG  900

seq1  ACTC-TCAGTAAGAGTTTGTCTAAAATAAGCCAGCTTGT-GGGCATGCCT  947
      |||| ||||||||||||||||| |||||||||||||||| ||||||||||
seq2  ACTCTTCAGTAAGAGTTTGTCT-AAATAAGCCAGCTTGTGGGGCATGCCT  949

seq1  G-AGATGGATTTTTCTAACGGGTTAGTTGAGGTAGAAAGA-CCCCCCTCA  995
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAGATGGATTTTTCTAACGGGTTAGTTGAGGTAGAAAGACCCCCCCTCA  999

seq1  GCCCCCGAATGTGGGTACCATTTTCTGGGATGGGCCCTAGGCT-ATATG-  1043
      ||||| |||||||||||| |||||||||||||||||||||||| ||||| 
seq2  GCCCCGGAATGTGGGTACAATTTTCTGGGATGGGCCCTAGGCTAATATGA  1049

seq1  AAAAGGAGAGGGTAAACTGGCAAGCTTGCATGACTCTGT  1082
      ||||||| | ||  |||||||||||||||||||||||||
seq2  AAAAGGAAAAGGGTAACTGGCAAGCTTGCATGACTCTGT  1088

seq1: chr3_31798733_31798866
seq2: B6Ng01-211G03.g_70_203 (reverse)

seq1  TCCCCTTCCTTTTCCTCCCCTTTCCTTTCCTTCCTTCTTCTCTCAATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCTTTTCCTCCCCTTTCCTTTCCTTCCTTCTTCTCTCAATCAT  50

seq1  GATCCTCCTTTCTCACCACAAACAAACAAACAAACAAACAAACAAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCTTTCTCACCACAAACAAACAAACAAACAAACAAACAAAAACA  100

seq1  AATAACAGAATCTGACCCTGACATCACAGGTAGA  134
      ||||||||||||||||||||||||||||||||||
seq2  AATAACAGAATCTGACCCTGACATCACAGGTAGA  134