BAC Information

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BAC

Clone NameB6Ng01-212C08
Chromosome3 (Build37)
Map Location 115,217,819 - 115,413,571
singlet/doubletdoublet
Overlap geneEG546808, Edg1
Upstream geneOlfm3
Downstream geneDph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a, Rtcd1, Dbt, LOC100043702, LOC100043705, Lrrc39, A930028L21Rik, Sass6, Hiat1, Slc35a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212C08.bB6Ng01-212C08.g
ACCGA030019GA030020
length1,014847
definitionB6Ng01-212C08.b B6Ng01-212C08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,217,819 - 115,218,794)(115,412,729 - 115,413,571)
sequence
gaattccaaatgacataaaaagattaagaggaagatataaatccagcagg
caacttcagacagcaaatttacataagattcgggaacatgctctgttact
tacttttcttattgttataacaaacacctgagagggaaaccttagaagga
agaaaggttgacttagacctcagtgtcagaggttgagatccaaatggatt
aaaatcattagcttaggtgtcttgtagcaatcagaaagaagcacacaaca
acaaagaatagggtaaattctagtttcccagagtgtggtccagcaaccta
cttcccctgatgaggccccatcttatacttactccccgcccaataacact
tcatattttcaatctatcaatggatgagtcccttcactagcatcttcatg
attcatttacttccctatactgcccattagctggcaaccaaaccttggca
tatcagctttgggatacactccgttatctgctatgacttacatgtacaat
gtattccacaaccttgtgcactgaacacacagtgatcagcccctggcatt
gttttgaaggctgcggaccctctaggtagtggggatttgctgcagaaatt
aagccactggaggtgggtcttttataactacaacttctgtctacttcctg
gtcatgtaaacaggtctcagttctcccaagaacaaaagcaatagccaaat
catgccttgcctgctctggcagactgaagtccccctggaaccagaagctg
aaaaggtctttccctcccttcagttgtctctgtctggtttttcttttaca
gtcacacaggactcatttactacaatgtgaaaaacataccaaacactgtg
tcatttacagtacgtgctactcttctactgcatgtttactcattctggtt
gcaggctcccttatgtacttataacacgcgaagcaattagcataagcatg
tttggctccattagctacaacagaactctgcagtgctaaatgatgtcagt
ttttaataggagca
gaattctttatttcggctgtcactaggtattgatgatggttataaatgtt
acagagaataaaaatatattagtctctttagtctggtgttcagtgagtgc
aattaagccaagaaatgtcttttttaaaaaatagtatttaataggttcct
gacttttgtggatcattttgcacatagctttatcaacttttaaacattaa
taaactgatttttttaaaagattcttttgtgaagaaaactttttaaaaaa
tcattcactgagatttggagttaaaggtaaggcccaatttaaaaaagtta
agagaagttaaaagcttttaccttgatgaagtaaggtatgaaaaaaaatg
tggtttgtttagaaaccactctagctttttcaggaagagaaacttcaata
aattagcattagagacacgtggagaatatgagaaaaaccatcaaccttct
aagaccacagcaaatagatacaactatttcaattttaaagtgcagtgagg
ccaaacaaaaccaagtgcgataattccatcctaaaatacagccttctgaa
gttcagcaatggagtcttaaatctattttaaattatgactaaaatgatca
gttcaaacaccacagcaaaagcatacatacttggccttttatcaacatac
tgggaaagagaaaacatggctaatgggtgataatgttaaattggtcagtg
ctgtgtaaagtttttggtttgtgtattcttaagacaaggtctcatgtgtt
ctagacttgcctcatgcttgctctgaagaggaaatgtgggctgttgatcc
tcccacttcctcctcctcctccaccacctcctcctcgtcctgtcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115217819_115218794
seq2: B6Ng01-212C08.b_44_1021

seq1  GAATTCCAAATGACATAAAAAGATTAAGAGGAAGATATAAATCCAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATGACATAAAAAGATTAAGAGGAAGATATAAATCCAGCAGG  50

seq1  CAACTTCAGACAGCAAATTTACATAAGATTCGGGAACATGCTCTGTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAGACAGCAAATTTACATAAGATTCGGGAACATGCTCTGTTACT  100

seq1  TACTTTTCTTATTGTTATAACAAACACCTGAGAGGGAAACCTTAGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCTTATTGTTATAACAAACACCTGAGAGGGAAACCTTAGAAGGA  150

seq1  AGAAAGGTTGACTTAGACCTCAGTGTCAGAGGTTGAGATCCAAATGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTTGACTTAGACCTCAGTGTCAGAGGTTGAGATCCAAATGGATT  200

seq1  AAAATCATTAGCTTAGGTGTCTTGTAGCAATCAGAAAGAAGCACACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTAGCTTAGGTGTCTTGTAGCAATCAGAAAGAAGCACACAACA  250

seq1  ACAAAGAATAGGGTAAATTCTAGTTTCCCAGAGTGTGGTCCAGCAACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATAGGGTAAATTCTAGTTTCCCAGAGTGTGGTCCAGCAACCTA  300

seq1  CTTCCCCTGATGAGGCCCCATCTTATACTTACTCCCCGCCCAATAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTGATGAGGCCCCATCTTATACTTACTCCCCGCCCAATAACACT  350

seq1  TCATATTTTCAATCTATCAATGGATGAGTCCCTTCACTAGCATCTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTCAATCTATCAATGGATGAGTCCCTTCACTAGCATCTTCATG  400

seq1  ATTCATTTACTTCCCTATACTGCCCATTAGCTGGCAACCAAACCTTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTACTTCCCTATACTGCCCATTAGCTGGCAACCAAACCTTGGCA  450

seq1  TATCAGCTTTGGGATACACTCCGTTATCTGCTATGACTTACATGTACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTTTGGGATACACTCCGTTATCTGCTATGACTTACATGTACAAT  500

seq1  GTATTCCACAACCTTGTGCACTGAACACACAGTGATCAGCCCCTGGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCACAACCTTGTGCACTGAACACACAGTGATCAGCCCCTGGCATT  550

seq1  GTTTTGAAGGCTGCGGACCCTCTAGGTAGTGGGGATTTGCTGCAGAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAGGCTGCGGACCCTCTAGGTAGTGGGGATTTGCTGCAGAAATT  600

seq1  AAGCCACTGGAGGTGGGTCTTTTATAACTACAACTTCTGTCTACTTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGGAGGTGGGTCTTTTATAACTACAACTTCTGTCTACTTCCTG  650

seq1  GTCATGTAAACAGGTCTCAGTTCTCCCAAGAACAAAAGCAATAGCCAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTAAACAGGTCTCAGTTCTCCCAAGAACAAAAGCAATAGCCAAAT  700

seq1  CATGCCTTGCCTGCTCTGGCAGACTGAAGTCCCCCTGGAACCAGAAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTGCCTGCTCTGGCAGACTGAAGTCCCCCTGGAACCAGAAGCTG  750

seq1  AAAAGGTCTTTCCCTCCCTTCAGTTGTCTCTGTCTGGTTTTTCTTTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTCTTTCCCTCCCTTCAGTTGTCTCTGTCTGGTTTTTCTTTTACA  800

seq1  GTCACACAGGACTCA-TTACTACAATGTGAAAAACATACCAAACACTGTG  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCACACAGGACTCATTTACTACAATGTGAAAAACATACCAAACACTGTG  850

seq1  TCATTTACAGTACGTGCTACTCTTCTACTGCATGTTTACTCATTCTGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACAGTACGTGCTACTCTTCTACTGCATGTTTACTCATTCTGGTT  900

seq1  GCAGGCTTCCTTATGTACTTATAACACGCGAAGCAATTAGCATAAGCATG  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTCCCTTATGTACTTATAACACGCGAAGCAATTAGCATAAGCATG  950

seq1  -TTGGCTCCATTAGCTACAACAGAACTC  976
       |||||||||||||||||||||||||||
seq2  TTTGGCTCCATTAGCTACAACAGAACTC  978

seq1: chr3_115412729_115413571
seq2: B6Ng01-212C08.g_66_912 (reverse)

seq1  GAAG--AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTGGGAGGA  48
      ||||  |||| |||||||||| || |||||||||||||||||||||||||
seq2  GAAGACAGGACGAGGAGGAGGTGGTGGAGGAGGAGGAGGAAGTGGGAGGA  50

seq1  TCAACAGCCCACA-TTCCTCTTCAGAGCAAGCATGAGGCAAGTCTAGAAC  97
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAACAGCCCACATTTCCTCTTCAGAGCAAGCATGAGGCAAGTCTAGAAC  100

seq1  ACATGAGACCTTGTCTTAAGAATACACAAACCAAAAAC-TTACACAGCAC  146
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACATGAGACCTTGTCTTAAGAATACACAAACCAAAAACTTTACACAGCAC  150

seq1  TGACCAATTTAACATTATCACCCATTAGCCATGTTTTCTCTTTCCCAGTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAATTTAACATTATCACCCATTAGCCATGTTTTCTCTTTCCCAGTA  200

seq1  TGTTGATAAAAGGCCAAGTATGTATGCTTTTGCTGTGGTGTTTGAACTGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATAAAAGGCCAAGTATGTATGCTTTTGCTGTGGTGTTTGAACTGA  250

seq1  TCATTTTAGTCATAATTTAAAATAGATTTAAGACTCCATTGCTGAACTTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAGTCATAATTTAAAATAGATTTAAGACTCCATTGCTGAACTTC  300

seq1  AGAAGGCTGTATTTTAGGATGGAATTATCGCACTTGGTTTTGTTTGGCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTGTATTTTAGGATGGAATTATCGCACTTGGTTTTGTTTGGCCT  350

seq1  CACTGCACTTTAAAATTGAAATAGTTGTATCTATTTGCTGTGGTCTTAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCACTTTAAAATTGAAATAGTTGTATCTATTTGCTGTGGTCTTAGA  400

seq1  AGGTTGATGGTTTTTCTCATATTCTCCACGTGTCTCTAATGCTAATTTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATGGTTTTTCTCATATTCTCCACGTGTCTCTAATGCTAATTTAT  450

seq1  TGAAGTTTCTCTTCCTGAAAAAGCTAGAGTGGTTTCTAAACAAACCACAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTCTCTTCCTGAAAAAGCTAGAGTGGTTTCTAAACAAACCACAT  500

seq1  TTTTTTTCATACCTTACTTCATCAAGGTAAAAGCTTTTAACTTCTCTTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCATACCTTACTTCATCAAGGTAAAAGCTTTTAACTTCTCTTAA  550

seq1  CTTTTTTAAATTGGGCCTTACCTTTAACTCCAAATCTCAGTGAATGATTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAATTGGGCCTTACCTTTAACTCCAAATCTCAGTGAATGATTT  600

seq1  TTTAAAAAGTTTTCTTCACAAAAGAATCTTTTAAAAAAATCAGTTTATTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTTTTCTTCACAAAAGAATCTTTTAAAAAAATCAGTTTATTA  650

seq1  ATGTTTAAAAGTTGATAAAGCTATGTGCAAAATGATCCACAAAAGTCAGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAAGTTGATAAAGCTATGTGCAAAATGATCCACAAAAGTCAGG  700

seq1  AACCTATTAAATACTATTTTTTAAAAAAGACATTTCTTGGCTTAATTGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATTAAATACTATTTTTTAAAAAAGACATTTCTTGGCTTAATTGCA  750

seq1  CTCACTGAACACCAGACTAAAGAGACTAATATATTTTTATTCTCTGTAAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGAACACCAGACTAAAGAGACTAATATATTTTTATTCTCTGTAAC  800

seq1  ATTTATAACCATCATCAATACCTAGTGACAGCCGAAATAAAGAATTC  843
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAACCATCATCAATACCTAGTGACAGCCGAAATAAAGAATTC  847