BAC Information

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BAC

Clone NameB6Ng01-212G21
Chromosome3 (Build37)
Map Location 81,551,902 - 81,639,427
singlet/doubletdoublet
Overlap genenone
Upstream geneGria2, Glrb, EG626841, Pdgfc, LOC229443
Downstream geneLOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212G21.bB6Ng01-212G21.g
ACCGA030228GA030229
length88598
definitionB6Ng01-212G21.b B6Ng01-212G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,551,902 - 81,552,786)(81,639,330 - 81,639,427)
sequence
gaattccacctttgttgaaatacagttgatgactggcaaagcaaccccta
tttttagcactcgtggaatgcactgccatgatgttagtagaattttaaaa
gtttaaagagttgagatgttatggttggatcttaaatgaaccccaaagac
ccatgtgttatttgccagcttgggagcatacagggatatagtggctcatc
taagaggcagagtctagtgatgggtcttcaagtcattggtggtatgactt
agaatggatactggaatccaggacctttttttccttctgtttttgaagtg
tgcatcaccatgatgcctctcctcaatacaggtgtcagatcaaccctgac
agtagagccaaaaaacaaaacaacaaacaaaaaatgttccctccttctaa
attgtttgtctcaggtgctttgtgacagggacaggaacactgactaacac
attgttgtgttgtaatacaaaatatttcctagggagactcacataaatct
attcaccctagaaaacagtccccaaacaaaccataatatggataacactg
aaatctgagttatgaactaatgaatttttggagggttgcttacagataca
tgattgagaggttatttacaggggaagaacttacttaaaaacaaccatat
catcaaattcctccccagcgtgggagagagttcacaacacctagcaacct
tgagtatgtacaggcagcaggaggacaaacaagttggagactgtccttac
catgtgttaacaagcagcctggctggtttctgctgcttgcagcagttcga
atggtctttccttgtttgtgcttggcttctttgacagtcttcttcgcagt
tcaagtacattcttctgcagtttttgttgtttatt
tcacaccaggcagggccagagttctccgtgcaaagcctctggtacacaga
cccacagctcctctccaagactgtctggacatgaggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_81551902_81552786
seq2: B6Ng01-212G21.b_42_926

seq1  GAATTCCACCTTTGTTGAAATACAGTTGATGACTGGCAAAGCAACCCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTTGTTGAAATACAGTTGATGACTGGCAAAGCAACCCCTA  50

seq1  TTTTTAGCACTCGTGGAATGCACTGCCATGATGTTAGTAGAATTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCACTCGTGGAATGCACTGCCATGATGTTAGTAGAATTTTAAAA  100

seq1  GTTTAAAGAGTTGAGATGTTATGGTTGGATCTTAAATGAACCCCAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGAGTTGAGATGTTATGGTTGGATCTTAAATGAACCCCAAAGAC  150

seq1  CCATGTGTTATTTGCCAGCTTGGGAGCATACAGGGATATAGTGGCTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTTATTTGCCAGCTTGGGAGCATACAGGGATATAGTGGCTCATC  200

seq1  TAAGAGGCAGAGTCTAGTGATGGGTCTTCAAGTCATTGGTGGTATGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCAGAGTCTAGTGATGGGTCTTCAAGTCATTGGTGGTATGACTT  250

seq1  AGAATGGATACTGGAATCCAGGACCTTTTTTTCCTTCTGTTTTTGAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGATACTGGAATCCAGGACCTTTTTTTCCTTCTGTTTTTGAAGTG  300

seq1  TGCATCACCATGATGCCTCTCCTCAATACAGGTGTCAGATCAACCCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCACCATGATGCCTCTCCTCAATACAGGTGTCAGATCAACCCTGAC  350

seq1  AGTAGAGCCAAAAAACAAAACAACAAACAAAAAATGTTCCCTCCTTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCCAAAAAACAAAACAACAAACAAAAAATGTTCCCTCCTTCTAA  400

seq1  ATTGTTTGTCTCAGGTGCTTTGTGACAGGGACAGGAACACTGACTAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTGTCTCAGGTGCTTTGTGACAGGGACAGGAACACTGACTAACAC  450

seq1  ATTGTTGTGTTGTAATACAAAATATTTCCTAGGGAGACTCACATAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTGTTGTAATACAAAATATTTCCTAGGGAGACTCACATAAATCT  500

seq1  ATTCACCCTAGAAAACAGTCCCCAAACAAACCATAATATGGATAACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCTAGAAAACAGTCCCCAAACAAACCATAATATGGATAACACTG  550

seq1  AAATCTGAGTTATGAACTAATGAATTTTTGGAGGGTTGCTTACAGATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGTTATGAACTAATGAATTTTTGGAGGGTTGCTTACAGATACA  600

seq1  TGATTGAGAGGTTATTTACAGGGGAAGAACTTACTTAAAAACAACCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGAGGTTATTTACAGGGGAAGAACTTACTTAAAAACAACCATAT  650

seq1  CATCAAATTCCTCCCCAGCGTGGGAGAGAGTTCACAACACCTAGCAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATTCCTCCCCAGCGTGGGAGAGAGTTCACAACACCTAGCAACCT  700

seq1  TGAGTATGTACAGGCAGCAGGAGGACAAACAAGTTGGAGACTGTCCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGTACAGGCAGCAGGAGGACAAACAAGTTGGAGACTGTCCTTAC  750

seq1  CATGTGTTAACAAGCAGCCTGGCTGGTTTCTGCTGCTTGCAGCAGTTCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTAACAAGCAGCCTGGCTGGTTTCTGCTGCTTGCAGCAGTTCGA  800

seq1  ATGGTCTTTCCTTGTTTGTGCTTGGCTTCTTTGACAGTCTTCTTCGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTCCTTGTTTGTGCTTGGCTTCTTTGACAGTCTTCTTCGCAGT  850

seq1  TCAAGTACATTCTTCTGCAGTTTTTGTTGTTTATT  885
      |||||||||||||||||||||||||||||||||||
seq2  TCAAGTACATTCTTCTGCAGTTTTTGTTGTTTATT  885

seq1: chr3_81639330_81639427
seq2: B6Ng01-212G21.g_67_164 (reverse)

seq1  TCCCCCCCCCCCCCTCATGTCCAGACAGTCTTGGAGAGGAGCTGTGGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCCCTCATGTCCAGACAGTCTTGGAGAGGAGCTGTGGGTC  50

seq1  TGTGTACCAGAGGCTTTGCACGGAGAACTCTGGCCCTGCCTGGTGTGA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCAGAGGCTTTGCACGGAGAACTCTGGCCCTGCCTGGTGTGA  98